Protein–RNA interactions for Protein: P38959

VPS41, Vacuolar protein sorting-associated protein 41, yeastyeast

Predictions only

Length 992 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS41P38959 CAB5YDR196C 726 nt8.86□□□□□ -0.99
VPS41P38959 ESS1YJR017C 513 nt8.86□□□□□ -0.99
VPS41P38959 YDR306CYDR306C 1437 nt8.86□□□□□ -0.99
VPS41P38959 RIB3YDR487C 627 nt8.85□□□□□ -0.99
VPS41P38959 AIM34YMR003W 597 nt8.85□□□□□ -0.99
VPS41P38959 YMR316C-BYMR316C-B 309 nt8.85□□□□□ -0.99
VPS41P38959 SWT21YNL187W 1074 nt8.85□□□□□ -0.99
VPS41P38959 GGA2YHR108W 1758 nt8.85□□□□□ -0.99
VPS41P38959 GAL3YDR009W 1563 nt8.84□□□□□ -0.99
VPS41P38959 YMR244WYMR244W 1068 nt8.84□□□□□ -0.99
VPS41P38959 snR31snR31 225 nt8.84□□□□□ -0.99
VPS41P38959 TOM71YHR117W 1920 nt8.84□□□□□ -1
VPS41P38959 SLM3YDL033C 1254 nt8.83□□□□□ -1
VPS41P38959 ABP1YCR088W 1779 nt8.83□□□□□ -1
VPS41P38959 PMT7YDR307W 1989 nt8.82□□□□□ -1
VPS41P38959 YFR036W-AYFR036W-A 651 nt8.82□□□□□ -1
VPS41P38959 MRS4YKR052C 915 nt8.82□□□□□ -1
VPS41P38959 YMR226CYMR226C 804 nt8.82□□□□□ -1
VPS41P38959 snR86snR86 1004 nt8.81□□□□□ -1
VPS41P38959 YRF1-1YDR545W 5391 nt8.81□□□□□ -1
VPS41P38959 YRF1-5YLR467W 5391 nt8.81□□□□□ -1
VPS41P38959 YRF1-8YOR396W 5391 nt8.81□□□□□ -1
VPS41P38959 VRG4YGL225W 1014 nt8.8□□□□□ -1
VPS41P38959 YLR437C-AYLR437C-A 228 nt8.8□□□□□ -1
VPS41P38959 NSG2YNL156C 900 nt8.8□□□□□ -1
VPS41P38959 RIB7YBR153W 735 nt8.8□□□□□ -1
VPS41P38959 YKL053WYKL053W 375 nt8.79□□□□□ -1
VPS41P38959 YLR173WYLR173W 1827 nt8.79□□□□□ -1
VPS41P38959 PRC1YMR297W 1599 nt8.77□□□□□ -1.01
VPS41P38959 ITR1YDR497C 1755 nt8.76□□□□□ -1.01
VPS41P38959 CHA1YCL064C 1083 nt8.75□□□□□ -1.01
VPS41P38959 TVP23YDR084C 600 nt8.75□□□□□ -1.01
VPS41P38959 PUS7YOR243C 2031 nt8.75□□□□□ -1.01
VPS41P38959 LSB3YFR024C-A 1380 nt8.74□□□□□ -1.01
VPS41P38959 SBP1YHL034C 885 nt8.73□□□□□ -1.01
VPS41P38959 HIS3YOR202W 663 nt8.72□□□□□ -1.01
VPS41P38959 AAC3YBR085W 924 nt8.72□□□□□ -1.01
VPS41P38959 SAN1YDR143C 1833 nt8.72□□□□□ -1.01
VPS41P38959 RBG2YGR173W 1107 nt8.7□□□□□ -1.02
VPS41P38959 YPL264CYPL264C 1062 nt8.69□□□□□ -1.02
VPS41P38959 TOP3YLR234W 1971 nt8.68□□□□□ -1.02
VPS41P38959 BEM1YBR200W 1656 nt8.68□□□□□ -1.02
VPS41P38959 LYS20YDL182W 1287 nt8.67□□□□□ -1.02
VPS41P38959 RTG2YGL252C 1767 nt8.66□□□□□ -1.02
VPS41P38959 NDE2YDL085W 1638 nt8.66□□□□□ -1.02
VPS41P38959 SPE4YLR146C 903 nt8.66□□□□□ -1.02
VPS41P38959 PMA2YPL036W 2844 nt8.64□□□□□ -1.03
VPS41P38959 FRT1YOR324C 1809 nt8.64□□□□□ -1.03
VPS41P38959 RIB2YOL066C 1776 nt8.63□□□□□ -1.03
VPS41P38959 YEL034C-AYEL034C-A 603 nt8.63□□□□□ -1.03
VPS41P38959 YPI1YFR003C 468 nt8.63□□□□□ -1.03
VPS41P38959 WSC4YHL028W 1818 nt8.63□□□□□ -1.03
VPS41P38959 ATP10YLR393W 840 nt8.62□□□□□ -1.03
VPS41P38959 HXT9YJL219W 1704 nt8.62□□□□□ -1.03
VPS41P38959 SNU66YOR308C 1764 nt8.61□□□□□ -1.03
VPS41P38959 YER152CYER152C 1332 nt8.61□□□□□ -1.03
VPS41P38959 AMF1YOR378W 1548 nt8.61□□□□□ -1.03
VPS41P38959 SPS100YHR139C 981 nt8.61□□□□□ -1.03
VPS41P38959 ERG6YML008C 1152 nt8.61□□□□□ -1.03
VPS41P38959 TMS1YDR105C 1422 nt8.61□□□□□ -1.03
VPS41P38959 MET13YGL125W 1803 nt8.61□□□□□ -1.03
VPS41P38959 PAR32YDL173W 888 nt8.6□□□□□ -1.03
VPS41P38959 SNZ1YMR096W 894 nt8.6□□□□□ -1.03
VPS41P38959 GCD11YER025W 1584 nt8.6□□□□□ -1.03
VPS41P38959 GGC1YDL198C 903 nt8.59□□□□□ -1.03
VPS41P38959 YMR253CYMR253C 1245 nt8.58□□□□□ -1.04
VPS41P38959 MRN1YPL184C 1839 nt8.58□□□□□ -1.04
VPS41P38959 YIL177CYIL177C 5277 nt8.58□□□□□ -1.04
VPS41P38959 MEP1YGR121C 1479 nt8.57□□□□□ -1.04
VPS41P38959 ERR3YMR323W 1314 nt8.57□□□□□ -1.04
VPS41P38959 ERR1YOR393W 1314 nt8.57□□□□□ -1.04
VPS41P38959 ERR2YPL281C 1314 nt8.57□□□□□ -1.04
VPS41P38959 TIF3YPR163C 1311 nt8.57□□□□□ -1.04
VPS41P38959 YPR126CYPR126C 309 nt8.57□□□□□ -1.04
VPS41P38959 YJL009WYJL009W 327 nt8.56□□□□□ -1.04
VPS41P38959 ABZ2YMR289W 1125 nt8.56□□□□□ -1.04
VPS41P38959 YNL140CYNL140C 570 nt8.56□□□□□ -1.04
VPS41P38959 YNR029CYNR029C 1290 nt8.56□□□□□ -1.04
VPS41P38959 GAS1YMR307W 1680 nt8.56□□□□□ -1.04
VPS41P38959 ENO2YHR174W 1314 nt8.55□□□□□ -1.04
VPS41P38959 RRT6YGL146C 936 nt8.55□□□□□ -1.04
VPS41P38959 SGF73YGL066W 1974 nt8.55□□□□□ -1.04
VPS41P38959 PTC6YCR079W 1329 nt8.54□□□□□ -1.04
VPS41P38959 YBR056WYBR056W 1506 nt8.54□□□□□ -1.04
VPS41P38959 SRP54YPR088C 1626 nt8.54□□□□□ -1.04
VPS41P38959 NME1NME1 340 nt8.53□□□□□ -1.04
VPS41P38959 ADE2YOR128C 1716 nt8.53□□□□□ -1.04
VPS41P38959 GLY1YEL046C 1164 nt8.52□□□□□ -1.05
VPS41P38959 RPL2AYFR031C-A 765 nt8.52□□□□□ -1.05
VPS41P38959 ADH1YOL086C 1047 nt8.52□□□□□ -1.05
VPS41P38959 CTF3YLR381W 2202 nt8.52□□□□□ -1.05
VPS41P38959 LRO1YNR008W 1986 nt8.52□□□□□ -1.05
VPS41P38959 INO1YJL153C 1602 nt8.51□□□□□ -1.05
VPS41P38959 ADE5,7YGL234W 2409 nt8.5□□□□□ -1.05
VPS41P38959 TPC1YGR096W 945 nt8.49□□□□□ -1.05
VPS41P38959 YRF1-3YGR296W 5580 nt8.48□□□□□ -1.05
VPS41P38959 YRF1-6YNL339C 5580 nt8.48□□□□□ -1.05
VPS41P38959 YRF1-7YPL283C 5580 nt8.48□□□□□ -1.05
VPS41P38959 BUD31YCR063W 474 nt8.48□□□□□ -1.05
VPS41P38959 INM1YHR046C 888 nt8.48□□□□□ -1.05
Retrieved 100 of 7,029 protein–RNA pairs in 54.7 ms