Protein–RNA interactions for Protein: P38848

PEX28, Peroxisomal membrane protein PEX28, yeastyeast

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PEX28P38848 tA(UGC)GtA(UGC)G 73 nt8.78□□□□□ -1
PEX28P38848 tA(UGC)LtA(UGC)L 73 nt8.78□□□□□ -1
PEX28P38848 tA(UGC)OtA(UGC)O 73 nt8.78□□□□□ -1
PEX28P38848 OPI3YJR073C 621 nt8.78□□□□□ -1
PEX28P38848 CWC15YDR163W 528 nt8.77□□□□□ -1.01
PEX28P38848 EDC2YER035W 438 nt8.77□□□□□ -1.01
PEX28P38848 YGR210CYGR210C 1236 nt8.77□□□□□ -1.01
PEX28P38848 SWP1YMR149W 861 nt8.77□□□□□ -1.01
PEX28P38848 YNL165WYNL165W 1221 nt8.77□□□□□ -1.01
PEX28P38848 AMF1YOR378W 1548 nt8.76□□□□□ -1.01
PEX28P38848 TPC1YGR096W 945 nt8.76□□□□□ -1.01
PEX28P38848 YKR012CYKR012C 378 nt8.76□□□□□ -1.01
PEX28P38848 FCY1YPR062W 477 nt8.76□□□□□ -1.01
PEX28P38848 YAT1YAR035W 2064 nt8.76□□□□□ -1.01
PEX28P38848 ARP10YDR106W 855 nt8.75□□□□□ -1.01
PEX28P38848 VPS62YGR141W 1404 nt8.74□□□□□ -1.01
PEX28P38848 MRP1YDR347W 966 nt8.74□□□□□ -1.01
PEX28P38848 ERO1YML130C 1692 nt8.74□□□□□ -1.01
PEX28P38848 HOG1YLR113W 1308 nt8.74□□□□□ -1.01
PEX28P38848 ACH1YBL015W 1581 nt8.73□□□□□ -1.01
PEX28P38848 SFP1YLR403W 2052 nt8.73□□□□□ -1.01
PEX28P38848 MET2YNL277W 1461 nt8.73□□□□□ -1.01
PEX28P38848 DTR1YBR180W 1719 nt8.72□□□□□ -1.01
PEX28P38848 YJL211CYJL211C 444 nt8.72□□□□□ -1.01
PEX28P38848 LEU2YCL018W 1095 nt8.72□□□□□ -1.01
PEX28P38848 LSB6YJL100W 1824 nt8.72□□□□□ -1.01
PEX28P38848 ENO1YGR254W 1314 nt8.72□□□□□ -1.01
PEX28P38848 SDS24YBR214W 1584 nt8.71□□□□□ -1.02
PEX28P38848 EMC3YKL207W 762 nt8.71□□□□□ -1.02
PEX28P38848 ILV2YMR108W 2064 nt8.7□□□□□ -1.02
PEX28P38848 YLR280CYLR280C 351 nt8.7□□□□□ -1.02
PEX28P38848 EEB1YPL095C 1371 nt8.7□□□□□ -1.02
PEX28P38848 SEM1YDR363W-A 270 nt8.69□□□□□ -1.02
PEX28P38848 YMR206WYMR206W 942 nt8.69□□□□□ -1.02
PEX28P38848 IDP3YNL009W 1263 nt8.69□□□□□ -1.02
PEX28P38848 ATG22YCL038C 1587 nt8.69□□□□□ -1.02
PEX28P38848 HEM14YER014W 1620 nt8.69□□□□□ -1.02
PEX28P38848 YDL086WYDL086W 822 nt8.68□□□□□ -1.02
PEX28P38848 YPL108WYPL108W 507 nt8.68□□□□□ -1.02
PEX28P38848 RIM2YBR192W 1134 nt8.68□□□□□ -1.02
PEX28P38848 NPP1YCR026C 2229 nt8.68□□□□□ -1.02
PEX28P38848 YJL160CYJL160C 864 nt8.67□□□□□ -1.02
PEX28P38848 AST1YBL069W 1290 nt8.66□□□□□ -1.02
PEX28P38848 NAM8YHR086W 1572 nt8.65□□□□□ -1.03
PEX28P38848 YNR064CYNR064C 873 nt8.64□□□□□ -1.03
PEX28P38848 SAC7YDR389W 1965 nt8.64□□□□□ -1.03
PEX28P38848 VBA3YCL069W 1377 nt8.63□□□□□ -1.03
PEX28P38848 HOS2YGL194C 1359 nt8.63□□□□□ -1.03
PEX28P38848 YMR210WYMR210W 1350 nt8.63□□□□□ -1.03
PEX28P38848 COX16YJL003W 357 nt8.62□□□□□ -1.03
PEX28P38848 tL(UAA)B1tL(UAA)B1 84 nt8.61□□□□□ -1.03
PEX28P38848 tL(UAA)B2tL(UAA)B2 84 nt8.61□□□□□ -1.03
PEX28P38848 tL(UAA)DtL(UAA)D 84 nt8.61□□□□□ -1.03
PEX28P38848 SUP51tL(UAA)J 84 nt8.61□□□□□ -1.03
PEX28P38848 tL(UAA)KtL(UAA)K 84 nt8.61□□□□□ -1.03
PEX28P38848 tL(UAA)LtL(UAA)L 84 nt8.61□□□□□ -1.03
PEX28P38848 tL(UAA)NtL(UAA)N 84 nt8.61□□□□□ -1.03
PEX28P38848 AIM1YAL046C 357 nt8.61□□□□□ -1.03
PEX28P38848 ENT4YLL038C 744 nt8.61□□□□□ -1.03
PEX28P38848 GDH1YOR375C 1365 nt8.61□□□□□ -1.03
PEX28P38848 KAE1YKR038C 1161 nt8.6□□□□□ -1.03
PEX28P38848 HMG2YLR450W 3138 nt8.58□□□□□ -1.04
PEX28P38848 REX2YLR059C 810 nt8.58□□□□□ -1.04
PEX28P38848 YJL107CYJL107C 1164 nt8.57□□□□□ -1.04
PEX28P38848 SWT21YNL187W 1074 nt8.55□□□□□ -1.04
PEX28P38848 PZF1YPR186C 1290 nt8.55□□□□□ -1.04
PEX28P38848 SDH8YBR269C 417 nt8.55□□□□□ -1.04
PEX28P38848 BAP3YDR046C 1815 nt8.54□□□□□ -1.04
PEX28P38848 SKG1YKR100C 1068 nt8.54□□□□□ -1.04
PEX28P38848 PRE5YMR314W 705 nt8.54□□□□□ -1.04
PEX28P38848 ADA2YDR448W 1305 nt8.54□□□□□ -1.04
PEX28P38848 MAE1YKL029C 2010 nt8.53□□□□□ -1.04
PEX28P38848 YMR147WYMR147W 672 nt8.53□□□□□ -1.04
PEX28P38848 SCO2YBR024W 906 nt8.53□□□□□ -1.04
PEX28P38848 KEL3YPL263C 1956 nt8.53□□□□□ -1.04
PEX28P38848 APM1YPL259C 1428 nt8.53□□□□□ -1.04
PEX28P38848 TAD2YJL035C 753 nt8.52□□□□□ -1.05
PEX28P38848 TPO4YOR273C 1980 nt8.52□□□□□ -1.05
PEX28P38848 RSM23YGL129C 1353 nt8.51□□□□□ -1.05
PEX28P38848 YFR020WYFR020W 699 nt8.51□□□□□ -1.05
PEX28P38848 MFT1YML062C 1179 nt8.51□□□□□ -1.05
PEX28P38848 YPL247CYPL247C 1572 nt8.51□□□□□ -1.05
PEX28P38848 YIL100C-AYIL100C-A 339 nt8.5□□□□□ -1.05
PEX28P38848 YMR166CYMR166C 1107 nt8.5□□□□□ -1.05
PEX28P38848 YNR068CYNR068C 819 nt8.5□□□□□ -1.05
PEX28P38848 LSP1YPL004C 1026 nt8.5□□□□□ -1.05
PEX28P38848 YLR046CYLR046C 813 nt8.49□□□□□ -1.05
PEX28P38848 SPT20YOL148C 1815 nt8.49□□□□□ -1.05
PEX28P38848 MLS1YNL117W 1665 nt8.49□□□□□ -1.05
PEX28P38848 PET18YCR020C 648 nt8.48□□□□□ -1.05
PEX28P38848 ELO1YJL196C 933 nt8.48□□□□□ -1.05
PEX28P38848 SRP54YPR088C 1626 nt8.47□□□□□ -1.05
PEX28P38848 YPT11YNL304W 1254 nt8.47□□□□□ -1.05
PEX28P38848 snR31snR31 225 nt8.47□□□□□ -1.05
PEX28P38848 RIM8YGL045W 1629 nt8.47□□□□□ -1.05
PEX28P38848 ELP4YPL101W 1371 nt8.47□□□□□ -1.05
PEX28P38848 SFL1YOR140W 2301 nt8.46□□□□□ -1.05
PEX28P38848 RFC1YOR217W 2586 nt8.46□□□□□ -1.06
PEX28P38848 GAL2YLR081W 1725 nt8.45□□□□□ -1.06
PEX28P38848 MET1YKR069W 1782 nt8.45□□□□□ -1.06
Retrieved 100 of 7,029 protein–RNA pairs in 13.7 ms