Protein–RNA interactions for Protein: P0CH09

RPL40B, Ubiquitin-60S ribosomal protein L40, yeastyeast

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL40BP0CH09 YKR012CYKR012C 378 nt8.07□□□□□ -1.12
RPL40BP0CH09 ENO1YGR254W 1314 nt8.06□□□□□ -1.12
RPL40BP0CH09 ENO2YHR174W 1314 nt8.06□□□□□ -1.12
RPL40BP0CH09 YOR111WYOR111W 699 nt8.06□□□□□ -1.12
RPL40BP0CH09 ELP4YPL101W 1371 nt8.06□□□□□ -1.12
RPL40BP0CH09 LSM5YER146W 282 nt8.05□□□□□ -1.12
RPL40BP0CH09 YJL043WYJL043W 774 nt8.04□□□□□ -1.12
RPL40BP0CH09 ADE1YAR015W 921 nt8.04□□□□□ -1.12
RPL40BP0CH09 CYT1YOR065W 930 nt8.04□□□□□ -1.12
RPL40BP0CH09 YHL008CYHL008C 1884 nt8.04□□□□□ -1.12
RPL40BP0CH09 LSB6YJL100W 1824 nt8.03□□□□□ -1.12
RPL40BP0CH09 UFO1YML088W 2007 nt8.03□□□□□ -1.12
RPL40BP0CH09 TVP23YDR084C 600 nt8.03□□□□□ -1.12
RPL40BP0CH09 ADE8YDR408C 645 nt8.03□□□□□ -1.12
RPL40BP0CH09 MFT1YML062C 1179 nt8.02□□□□□ -1.13
RPL40BP0CH09 DMA2YNL116W 1569 nt8.01□□□□□ -1.13
RPL40BP0CH09 ZAP1YJL056C 2643 nt8□□□□□ -1.13
RPL40BP0CH09 PET8YNL003C 855 nt8□□□□□ -1.13
RPL40BP0CH09 SDS24YBR214W 1584 nt8□□□□□ -1.13
RPL40BP0CH09 TPO4YOR273C 1980 nt7.99□□□□□ -1.13
RPL40BP0CH09 UTR5YEL035C 501 nt7.98□□□□□ -1.13
RPL40BP0CH09 TPC1YGR096W 945 nt7.98□□□□□ -1.13
RPL40BP0CH09 RRT8YOL048C 1029 nt7.98□□□□□ -1.13
RPL40BP0CH09 YMR074CYMR074C 438 nt7.97□□□□□ -1.13
RPL40BP0CH09 HMG2YLR450W 3138 nt7.97□□□□□ -1.13
RPL40BP0CH09 OSH7YHR001W 1314 nt7.97□□□□□ -1.13
RPL40BP0CH09 PET18YCR020C 648 nt7.95□□□□□ -1.14
RPL40BP0CH09 SOL2YCR073W-A 948 nt7.95□□□□□ -1.14
RPL40BP0CH09 AVO2YMR068W 1281 nt7.95□□□□□ -1.14
RPL40BP0CH09 PUP2YGR253C 783 nt7.94□□□□□ -1.14
RPL40BP0CH09 SPP2YOR148C 558 nt7.94□□□□□ -1.14
RPL40BP0CH09 YJL144WYJL144W 315 nt7.93□□□□□ -1.14
RPL40BP0CH09 ODC1YPL134C 933 nt7.93□□□□□ -1.14
RPL40BP0CH09 ACH1YBL015W 1581 nt7.93□□□□□ -1.14
RPL40BP0CH09 DOC1YGL240W 753 nt7.92□□□□□ -1.14
RPL40BP0CH09 YJR149WYJR149W 1215 nt7.92□□□□□ -1.14
RPL40BP0CH09 LSP1YPL004C 1026 nt7.92□□□□□ -1.14
RPL40BP0CH09 VPS62YGR141W 1404 nt7.92□□□□□ -1.14
RPL40BP0CH09 GAL83YER027C 1254 nt7.91□□□□□ -1.14
RPL40BP0CH09 YML079WYML079W 606 nt7.91□□□□□ -1.14
RPL40BP0CH09 AMF1YOR378W 1548 nt7.91□□□□□ -1.14
RPL40BP0CH09 DLD2YDL178W 1593 nt7.91□□□□□ -1.14
RPL40BP0CH09 YHR218WYHR218W 1812 nt7.9□□□□□ -1.14
RPL40BP0CH09 FMS1YMR020W 1527 nt7.9□□□□□ -1.14
RPL40BP0CH09 VBA3YCL069W 1377 nt7.9□□□□□ -1.14
RPL40BP0CH09 YDL086WYDL086W 822 nt7.9□□□□□ -1.14
RPL40BP0CH09 YHL030W-AYHL030W-A 462 nt7.9□□□□□ -1.14
RPL40BP0CH09 LEU2YCL018W 1095 nt7.9□□□□□ -1.14
RPL40BP0CH09 NUP53YMR153W 1428 nt7.89□□□□□ -1.15
RPL40BP0CH09 GID8YMR135C 1368 nt7.88□□□□□ -1.15
RPL40BP0CH09 HXK1YFR053C 1458 nt7.87□□□□□ -1.15
RPL40BP0CH09 SSL2YIL143C 2532 nt7.87□□□□□ -1.15
RPL40BP0CH09 ALD5YER073W 1563 nt7.86□□□□□ -1.15
RPL40BP0CH09 OPI3YJR073C 621 nt7.86□□□□□ -1.15
RPL40BP0CH09 YMR166CYMR166C 1107 nt7.86□□□□□ -1.15
RPL40BP0CH09 NPP1YCR026C 2229 nt7.86□□□□□ -1.15
RPL40BP0CH09 LAT1YNL071W 1449 nt7.86□□□□□ -1.15
RPL40BP0CH09 YPS3YLR121C 1527 nt7.85□□□□□ -1.15
RPL40BP0CH09 YRF1-2YER190W 5046 nt7.84□□□□□ -1.15
RPL40BP0CH09 YDR476CYDR476C 675 nt7.84□□□□□ -1.15
RPL40BP0CH09 YER156CYER156C 1017 nt7.84□□□□□ -1.15
RPL40BP0CH09 YLR358CYLR358C 564 nt7.84□□□□□ -1.15
RPL40BP0CH09 MRS6YOR370C 1812 nt7.84□□□□□ -1.15
RPL40BP0CH09 FLR1YBR008C 1647 nt7.84□□□□□ -1.15
RPL40BP0CH09 NAM8YHR086W 1572 nt7.84□□□□□ -1.15
RPL40BP0CH09 YDR455CYDR455C 309 nt7.83□□□□□ -1.16
RPL40BP0CH09 TDH1YJL052W 999 nt7.83□□□□□ -1.16
RPL40BP0CH09 YKL133CYKL133C 1392 nt7.83□□□□□ -1.16
RPL40BP0CH09 MDM35YKL053C-A 261 nt7.82□□□□□ -1.16
RPL40BP0CH09 QRI5YLR204W 336 nt7.81□□□□□ -1.16
RPL40BP0CH09 ERG13YML126C 1476 nt7.81□□□□□ -1.16
RPL40BP0CH09 SBP1YHL034C 885 nt7.8□□□□□ -1.16
RPL40BP0CH09 HXT10YFL011W 1641 nt7.79□□□□□ -1.16
RPL40BP0CH09 PSP2YML017W 1782 nt7.79□□□□□ -1.16
RPL40BP0CH09 YPR084WYPR084W 1371 nt7.77□□□□□ -1.17
RPL40BP0CH09 RRT14YIL127C 621 nt7.77□□□□□ -1.17
RPL40BP0CH09 CWP2YKL096W-A 279 nt7.77□□□□□ -1.17
RPL40BP0CH09 TAT2YOL020W 1779 nt7.76□□□□□ -1.17
RPL40BP0CH09 SLM3YDL033C 1254 nt7.76□□□□□ -1.17
RPL40BP0CH09 REX2YLR059C 810 nt7.76□□□□□ -1.17
RPL40BP0CH09 YOR072WYOR072W 315 nt7.76□□□□□ -1.17
RPL40BP0CH09 VMA11YPL234C 495 nt7.76□□□□□ -1.17
RPL40BP0CH09 YHR219WYHR219W 1875 nt7.76□□□□□ -1.17
RPL40BP0CH09 HEM13YDR044W 987 nt7.75□□□□□ -1.17
RPL40BP0CH09 YFR020WYFR020W 699 nt7.75□□□□□ -1.17
RPL40BP0CH09 YAL019W-AYAL019W-A 570 nt7.75□□□□□ -1.17
RPL40BP0CH09 YOX1YML027W 1158 nt7.75□□□□□ -1.17
RPL40BP0CH09 URA8YJR103W 1737 nt7.73□□□□□ -1.17
RPL40BP0CH09 PUS4YNL292W 1212 nt7.73□□□□□ -1.17
RPL40BP0CH09 RRT6YGL146C 936 nt7.72□□□□□ -1.17
RPL40BP0CH09 YLR184WYLR184W 348 nt7.72□□□□□ -1.17
RPL40BP0CH09 LSR1LSR1 1175 nt7.72□□□□□ -1.17
RPL40BP0CH09 NBA1YOL070C 1506 nt7.7□□□□□ -1.18
RPL40BP0CH09 RPS6AYPL090C 711 nt7.7□□□□□ -1.18
RPL40BP0CH09 RPS6BYBR181C 711 nt7.7□□□□□ -1.18
RPL40BP0CH09 PMP3YDR276C 168 nt7.69□□□□□ -1.18
RPL40BP0CH09 YLR030WYLR030W 792 nt7.69□□□□□ -1.18
RPL40BP0CH09 RPD3YNL330C 1302 nt7.69□□□□□ -1.18
RPL40BP0CH09 AGP3YFL055W 1677 nt7.69□□□□□ -1.18
RPL40BP0CH09 DLD3YEL071W 1491 nt7.68□□□□□ -1.18
Retrieved 100 of 7,029 protein–RNA pairs in 13.6 ms