Protein–RNA interactions for Protein: D6RIA3

LOC285556, Uncharacterized protein, humanhuman

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC285556D6RIA3 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
LOC285556D6RIA3 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC30.48■■■□□ 2.47
LOC285556D6RIA3 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
LOC285556D6RIA3 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC30.48■■■□□ 2.47
LOC285556D6RIA3 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC30.48■■■□□ 2.47
LOC285556D6RIA3 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
LOC285556D6RIA3 CHST11-202ENST00000546689 756 ntTSL 2 BASIC30.46■■■□□ 2.47
LOC285556D6RIA3 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC30.46■■■□□ 2.47
LOC285556D6RIA3 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
LOC285556D6RIA3 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC30.45■■■□□ 2.46
LOC285556D6RIA3 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
LOC285556D6RIA3 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
LOC285556D6RIA3 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
LOC285556D6RIA3 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
LOC285556D6RIA3 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC30.43■■■□□ 2.46
LOC285556D6RIA3 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
LOC285556D6RIA3 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC30.43■■■□□ 2.46
LOC285556D6RIA3 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
LOC285556D6RIA3 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC30.42■■■□□ 2.46
LOC285556D6RIA3 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC30.42■■■□□ 2.46
LOC285556D6RIA3 RARRES2P2-201ENST00000394842 485 ntBASIC30.42■■■□□ 2.46
LOC285556D6RIA3 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
LOC285556D6RIA3 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC30.4■■■□□ 2.46
LOC285556D6RIA3 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC30.4■■■□□ 2.46
LOC285556D6RIA3 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
LOC285556D6RIA3 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC30.4■■■□□ 2.46
LOC285556D6RIA3 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
LOC285556D6RIA3 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC30.39■■■□□ 2.46
LOC285556D6RIA3 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC30.39■■■□□ 2.46
LOC285556D6RIA3 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC30.38■■■□□ 2.45
LOC285556D6RIA3 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
LOC285556D6RIA3 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC30.38■■■□□ 2.45
LOC285556D6RIA3 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
LOC285556D6RIA3 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC30.37■■■□□ 2.45
LOC285556D6RIA3 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC30.36■■■□□ 2.45
LOC285556D6RIA3 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
LOC285556D6RIA3 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC30.35■■■□□ 2.45
LOC285556D6RIA3 ABHD17AP5-201ENST00000580133 923 ntBASIC30.35■■■□□ 2.45
LOC285556D6RIA3 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
LOC285556D6RIA3 GPX1-201ENST00000419349 1106 ntBASIC30.34■■■□□ 2.45
LOC285556D6RIA3 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC30.34■■■□□ 2.45
LOC285556D6RIA3 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
LOC285556D6RIA3 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
LOC285556D6RIA3 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
LOC285556D6RIA3 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC30.32■■■□□ 2.44
LOC285556D6RIA3 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
LOC285556D6RIA3 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC30.32■■■□□ 2.44
LOC285556D6RIA3 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC30.31■■■□□ 2.44
LOC285556D6RIA3 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC30.3■■■□□ 2.44
LOC285556D6RIA3 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC30.3■■■□□ 2.44
LOC285556D6RIA3 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC30.3■■■□□ 2.44
LOC285556D6RIA3 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
LOC285556D6RIA3 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC30.29■■■□□ 2.44
LOC285556D6RIA3 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC30.28■■■□□ 2.44
LOC285556D6RIA3 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC30.28■■■□□ 2.44
LOC285556D6RIA3 TPT1-202ENST00000379055 948 ntTSL 2 BASIC30.27■■■□□ 2.44
LOC285556D6RIA3 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
LOC285556D6RIA3 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC30.23■■■□□ 2.43
LOC285556D6RIA3 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC30.23■■■□□ 2.43
LOC285556D6RIA3 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
LOC285556D6RIA3 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC30.21■■■□□ 2.43
LOC285556D6RIA3 AC135983.2-203ENST00000454486 1613 ntBASIC30.21■■■□□ 2.43
LOC285556D6RIA3 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC30.2■■■□□ 2.43
LOC285556D6RIA3 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
LOC285556D6RIA3 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
LOC285556D6RIA3 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
LOC285556D6RIA3 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC30.2■■■□□ 2.42
LOC285556D6RIA3 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
LOC285556D6RIA3 WHAMMP2-203ENST00000563942 1603 ntBASIC30.19■■■□□ 2.42
LOC285556D6RIA3 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
LOC285556D6RIA3 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC30.18■■■□□ 2.42
LOC285556D6RIA3 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
LOC285556D6RIA3 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
LOC285556D6RIA3 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC30.17■■■□□ 2.42
LOC285556D6RIA3 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
LOC285556D6RIA3 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC30.16■■■□□ 2.42
LOC285556D6RIA3 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
LOC285556D6RIA3 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC30.15■■■□□ 2.42
LOC285556D6RIA3 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
LOC285556D6RIA3 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC30.15■■■□□ 2.42
LOC285556D6RIA3 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
LOC285556D6RIA3 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
LOC285556D6RIA3 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC30.13■■■□□ 2.41
LOC285556D6RIA3 RNF126P1-201ENST00000567452 1320 ntBASIC30.13■■■□□ 2.41
LOC285556D6RIA3 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC30.12■■■□□ 2.41
LOC285556D6RIA3 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC30.12■■■□□ 2.41
LOC285556D6RIA3 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC30.12■■■□□ 2.41
LOC285556D6RIA3 CEP120-209ENST00000515110 606 ntTSL 3 BASIC30.1■■■□□ 2.41
LOC285556D6RIA3 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
LOC285556D6RIA3 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
LOC285556D6RIA3 AC127502.1-201ENST00000399971 1502 ntBASIC30.09■■■□□ 2.41
LOC285556D6RIA3 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC30.09■■■□□ 2.41
LOC285556D6RIA3 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
LOC285556D6RIA3 AC008813.1-201ENST00000536597 885 ntBASIC30.08■■■□□ 2.41
LOC285556D6RIA3 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
LOC285556D6RIA3 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC30.07■■■□□ 2.4
LOC285556D6RIA3 AC148477.6-201ENST00000623746 465 ntBASIC30.07■■■□□ 2.4
LOC285556D6RIA3 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC30.07■■■□□ 2.4
LOC285556D6RIA3 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC30.07■■■□□ 2.4
LOC285556D6RIA3 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms