Protein–RNA interactions for Protein: Q06147

LCB5, Sphingoid long chain base kinase 5, yeastyeast

Known RBP Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LCB5Q06147 PET111YMR257C 2403 nt2.31□□□□□ -2.04
LCB5Q06147 YHR180C-BYHR180C-B 105 nt2.31□□□□□ -2.04
LCB5Q06147 PET127YOR017W 2403 nt2.3□□□□□ -2.04
LCB5Q06147 SSD1YDR293C 3753 nt2.3□□□□□ -2.04
LCB5Q06147 YML054C-AYML054C-A 159 nt2.3□□□□□ -2.04
LCB5Q06147 USO1YDL058W 5373 nt2.3□□□□□ -2.04
LCB5Q06147 CTR9YOL145C 3234 nt2.29□□□□□ -2.04
LCB5Q06147 PET309YLR067C 2898 nt2.29□□□□□ -2.04
LCB5Q06147 NIP1YMR309C 2439 nt2.29□□□□□ -2.04
LCB5Q06147 GCN2YDR283C 4980 nt2.29□□□□□ -2.04
LCB5Q06147 YDL159C-BYDL159C-B 177 nt2.28□□□□□ -2.04
LCB5Q06147 TRM3YDL112W 4311 nt2.28□□□□□ -2.04
LCB5Q06147 TFC3YAL001C 3483 nt2.28□□□□□ -2.04
LCB5Q06147 UBP2YOR124C 3819 nt2.27□□□□□ -2.05
LCB5Q06147 snR190snR190 190 nt2.27□□□□□ -2.05
LCB5Q06147 MYO2YOR326W 4725 nt2.26□□□□□ -2.05
LCB5Q06147 DGR1YNL130C-A 147 nt2.25□□□□□ -2.05
LCB5Q06147 CSF1YLR087C 8877 nt2.25□□□□□ -2.05
LCB5Q06147 KOG1YHR186C 4674 nt2.24□□□□□ -2.05
LCB5Q06147 IRE1YHR079C 3348 nt2.24□□□□□ -2.05
LCB5Q06147 SEC16YPL085W 6588 nt2.23□□□□□ -2.05
LCB5Q06147 GYP5YPL249C 2685 nt2.23□□□□□ -2.05
LCB5Q06147 SIR4YDR227W 4077 nt2.22□□□□□ -2.05
LCB5Q06147 EST1YLR233C 2100 nt2.22□□□□□ -2.05
LCB5Q06147 YJL052C-AYJL052C-A 120 nt2.21□□□□□ -2.06
LCB5Q06147 PAN2YGL094C 3348 nt2.21□□□□□ -2.06
LCB5Q06147 HER1YOR227W 3741 nt2.2□□□□□ -2.06
LCB5Q06147 YAR009CYAR009C 3591 nt2.2□□□□□ -2.06
LCB5Q06147 UTP22YGR090W 3714 nt2.2□□□□□ -2.06
LCB5Q06147 SAC3YDR159W 3906 nt2.2□□□□□ -2.06
LCB5Q06147 PKH3YDR466W 2697 nt2.19□□□□□ -2.06
LCB5Q06147 EMC5YIL027C 426 nt2.19□□□□□ -2.06
LCB5Q06147 CHS1YNL192W 3396 nt2.19□□□□□ -2.06
LCB5Q06147 BPH1YCR032W 6504 nt2.18□□□□□ -2.06
LCB5Q06147 HIR3YJR140C 4947 nt2.18□□□□□ -2.06
LCB5Q06147 YPR160W-AYPR160W-A 81 nt2.16□□□□□ -2.06
LCB5Q06147 ATG9YDL149W 2994 nt2.15□□□□□ -2.07
LCB5Q06147 NUT1YGL151W 3399 nt2.15□□□□□ -2.07
LCB5Q06147 TOR2YKL203C 7425 nt2.14□□□□□ -2.07
LCB5Q06147 snR69snR69 101 nt2.14□□□□□ -2.07
LCB5Q06147 YMR045CYMR045C 5268 nt2.12□□□□□ -2.07
LCB5Q06147 UBR2YLR024C 5619 nt2.12□□□□□ -2.07
LCB5Q06147 YLR419WYLR419W 4308 nt2.12□□□□□ -2.07
LCB5Q06147 SEC31YDL195W 3822 nt2.11□□□□□ -2.07
LCB5Q06147 RDS3YPR094W 324 nt2.11□□□□□ -2.07
LCB5Q06147 RAD50YNL250W 3939 nt2.11□□□□□ -2.07
LCB5Q06147 EST2YLR318W 2655 nt2.11□□□□□ -2.07
LCB5Q06147 MYO4YAL029C 4416 nt2.1□□□□□ -2.07
LCB5Q06147 TDA9YML081W 3756 nt2.09□□□□□ -2.07
LCB5Q06147 FKS1YLR342W 5631 nt2.06□□□□□ -2.08
LCB5Q06147 snR14snR14 160 nt2.06□□□□□ -2.08
LCB5Q06147 UTP21YLR409C 2820 nt2.06□□□□□ -2.08
LCB5Q06147 CSE1YGL238W 2883 nt2.06□□□□□ -2.08
LCB5Q06147 GEA2YEL022W 4380 nt2.05□□□□□ -2.08
LCB5Q06147 MSH6YDR097C 3729 nt2.05□□□□□ -2.08
LCB5Q06147 SXM1YDR395W 2835 nt2.05□□□□□ -2.08
LCB5Q06147 YOR376W-AYOR376W-A 156 nt2.05□□□□□ -2.08
LCB5Q06147 KCS1YDR017C 3153 nt2.04□□□□□ -2.08
LCB5Q06147 FAB1YFR019W 6837 nt2.03□□□□□ -2.08
LCB5Q06147 PRP16YKR086W 3216 nt2.03□□□□□ -2.08
LCB5Q06147 ROM2YLR371W 4071 nt2.02□□□□□ -2.09
LCB5Q06147 tN(GUU)QtN(GUU)Q 71 nt2.02□□□□□ -2.09
LCB5Q06147 SIP4YJL089W 2490 nt2.02□□□□□ -2.09
LCB5Q06147 PEP1YBL017C 4740 nt2.02□□□□□ -2.09
LCB5Q06147 NEO1YIL048W 3456 nt2.01□□□□□ -2.09
LCB5Q06147 KIP1YBL063W 3336 nt2.01□□□□□ -2.09
LCB5Q06147 TMA7YLR262C-A 195 nt2□□□□□ -2.09
LCB5Q06147 STO1YMR125W 2586 nt1.99□□□□□ -2.09
LCB5Q06147 ULP2YIL031W 3105 nt1.97□□□□□ -2.09
LCB5Q06147 SMC4YLR086W 4257 nt1.95□□□□□ -2.1
LCB5Q06147 IRC20YLR247C 4671 nt1.94□□□□□ -2.1
LCB5Q06147 BUL2YML111W 2763 nt1.94□□□□□ -2.1
LCB5Q06147 YHR214C-BYHR214C-B 5382 nt1.94□□□□□ -2.1
LCB5Q06147 NST1YNL091W 3723 nt1.93□□□□□ -2.1
LCB5Q06147 PAU12YGR294W 363 nt1.93□□□□□ -2.1
LCB5Q06147 HUG1YML058W-A 207 nt1.93□□□□□ -2.1
LCB5Q06147 SKI3YPR189W 4299 nt1.93□□□□□ -2.1
LCB5Q06147 KAP122YGL016W 3246 nt1.93□□□□□ -2.1
LCB5Q06147 SEC8YPR055W 3198 nt1.93□□□□□ -2.1
LCB5Q06147 YSP1YHR155W 3687 nt1.92□□□□□ -2.1
LCB5Q06147 MON2YNL297C 4911 nt1.91□□□□□ -2.1
LCB5Q06147 YPL060C-AYPL060C-A 3315 nt1.9□□□□□ -2.1
LCB5Q06147 MSH3YCR092C 3057 nt1.89□□□□□ -2.11
LCB5Q06147 YOR093CYOR093C 4947 nt1.87□□□□□ -2.11
LCB5Q06147 YDL114W-AYDL114W-A 114 nt1.87□□□□□ -2.11
LCB5Q06147 snR40snR40 97 nt1.87□□□□□ -2.11
LCB5Q06147 tQ(UUG)QtQ(UUG)Q 76 nt1.86□□□□□ -2.11
LCB5Q06147 tT(UGU)HtT(UGU)H 72 nt1.86□□□□□ -2.11
LCB5Q06147 YLR399W-AYLR399W-A 105 nt1.86□□□□□ -2.11
LCB5Q06147 YJL077W-AYJL077W-A 87 nt1.85□□□□□ -2.11
LCB5Q06147 YMR272W-BYMR272W-B 108 nt1.85□□□□□ -2.11
LCB5Q06147 YLR422WYLR422W 5799 nt1.85□□□□□ -2.11
LCB5Q06147 APL3YBL037W 3078 nt1.83□□□□□ -2.12
LCB5Q06147 YMR247W-AYMR247W-A 144 nt1.82□□□□□ -2.12
LCB5Q06147 VPS15YBR097W 4365 nt1.82□□□□□ -2.12
LCB5Q06147 SEC3YER008C 4011 nt1.82□□□□□ -2.12
LCB5Q06147 SPC110YDR356W 2835 nt1.8□□□□□ -2.12
LCB5Q06147 FYV8YGR196C 2454 nt1.79□□□□□ -2.12
LCB5Q06147 tV(UAC)QtV(UAC)Q 76 nt1.79□□□□□ -2.12
LCB5Q06147 DNF3YMR162C 4971 nt1.78□□□□□ -2.13
Retrieved 100 of 7,029 protein–RNA pairs in 11.3 ms