Protein–RNA interactions for Protein: Q05789

ATG38, Autophagy-related protein 38, yeastyeast

Known RBP Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ATG38Q05789 YDL007C-AYDL007C-A 258 nt-1.13□□□□□ -2.59
ATG38Q05789 YFL063WYFL063W 456 nt-1.15□□□□□ -2.59
ATG38Q05789 YNL122CYNL122C 348 nt-1.15□□□□□ -2.59
ATG38Q05789 RPS27BYHR021C 249 nt-1.18□□□□□ -2.6
ATG38Q05789 snR161snR161 161 nt-1.18□□□□□ -2.6
ATG38Q05789 YBR223W-AYBR223W-A 120 nt-1.19□□□□□ -2.6
ATG38Q05789 CSN9YDR179C 489 nt-1.2□□□□□ -2.6
ATG38Q05789 CSE2YNR010W 450 nt-1.2□□□□□ -2.6
ATG38Q05789 YPL060C-AYPL060C-A 3315 nt-1.21□□□□□ -2.6
ATG38Q05789 tA(UGC)QtA(UGC)Q 76 nt-1.22□□□□□ -2.6
ATG38Q05789 SDH6YDR379C-A 240 nt-1.24□□□□□ -2.61
ATG38Q05789 snR41snR41 95 nt-1.24□□□□□ -2.61
ATG38Q05789 YMR193C-AYMR193C-A 387 nt-1.27□□□□□ -2.61
ATG38Q05789 YER079WYER079W 633 nt-1.28□□□□□ -2.61
ATG38Q05789 TOM22YNL131W 459 nt-1.3□□□□□ -2.62
ATG38Q05789 PAU9YBL108C-A 129 nt-1.31□□□□□ -2.62
ATG38Q05789 COG6YNL041C 2520 nt-1.32□□□□□ -2.62
ATG38Q05789 YIL115W-AYIL115W-A 372 nt-1.32□□□□□ -2.62
ATG38Q05789 YJL197C-AYJL197C-A 282 nt-1.33□□□□□ -2.62
ATG38Q05789 YNR025CYNR025C 360 nt-1.33□□□□□ -2.62
ATG38Q05789 YER053C-AYER053C-A 114 nt-1.34□□□□□ -2.62
ATG38Q05789 YGR069WYGR069W 336 nt-1.35□□□□□ -2.63
ATG38Q05789 YLR264C-AYLR264C-A 117 nt-1.35□□□□□ -2.63
ATG38Q05789 YLR434CYLR434C 384 nt-1.36□□□□□ -2.63
ATG38Q05789 YNR077CYNR077C 255 nt-1.36□□□□□ -2.63
ATG38Q05789 YML100W-AYML100W-A 174 nt-1.37□□□□□ -2.63
ATG38Q05789 YLL019W-AYLL019W-A 93 nt-1.4□□□□□ -2.63
ATG38Q05789 YOL013W-BYOL013W-B 291 nt-1.4□□□□□ -2.63
ATG38Q05789 snR78snR78 87 nt-1.41□□□□□ -2.64
ATG38Q05789 APQ12YIL040W 417 nt-1.43□□□□□ -2.64
ATG38Q05789 tR(UCU)Q1tR(UCU)Q1 73 nt-1.46□□□□□ -2.64
ATG38Q05789 YJL182CYJL182C 318 nt-1.47□□□□□ -2.64
ATG38Q05789 YIL002W-AYIL002W-A 210 nt-1.51□□□□□ -2.65
ATG38Q05789 YER137W-AYER137W-A 306 nt-1.53□□□□□ -2.65
ATG38Q05789 YPR016W-AYPR016W-A 261 nt-1.53□□□□□ -2.65
ATG38Q05789 YDR048CYDR048C 315 nt-1.54□□□□□ -2.66
ATG38Q05789 YOR072W-BYOR072W-B 162 nt-1.54□□□□□ -2.66
ATG38Q05789 HMRA1YCR097W 381 nt-1.56□□□□□ -2.66
ATG38Q05789 tP(UGG)QtP(UGG)Q 72 nt-1.56□□□□□ -2.66
ATG38Q05789 YLR154W-FYLR154W-F 141 nt-1.56□□□□□ -2.66
ATG38Q05789 snR49snR49 165 nt-1.58□□□□□ -2.66
ATG38Q05789 YDR544CYDR544C 429 nt-1.6□□□□□ -2.67
ATG38Q05789 YGL182CYGL182C 324 nt-1.61□□□□□ -2.67
ATG38Q05789 YJL077W-AYJL077W-A 87 nt-1.62□□□□□ -2.67
ATG38Q05789 YLR406C-AYLR406C-A 150 nt-1.62□□□□□ -2.67
ATG38Q05789 YOR015WYOR015W 360 nt-1.62□□□□□ -2.67
ATG38Q05789 YLR202CYLR202C 327 nt-1.63□□□□□ -2.67
ATG38Q05789 YGL052WYGL052W 306 nt-1.64□□□□□ -2.67
ATG38Q05789 YOR121CYOR121C 306 nt-1.64□□□□□ -2.67
ATG38Q05789 YKL063CYKL063C 504 nt-1.66□□□□□ -2.68
ATG38Q05789 snR60snR60 104 nt-1.67□□□□□ -2.68
ATG38Q05789 YMR001C-AYMR001C-A 231 nt-1.67□□□□□ -2.68
ATG38Q05789 tW(UCA)QtW(UCA)Q 74 nt-1.68□□□□□ -2.68
ATG38Q05789 ATP19YOL077W-A 207 nt-1.68□□□□□ -2.68
ATG38Q05789 YGL149WYGL149W 306 nt-1.69□□□□□ -2.68
ATG38Q05789 YAF9YNL107W 681 nt-1.71□□□□□ -2.68
ATG38Q05789 YOR170WYOR170W 306 nt-1.71□□□□□ -2.68
ATG38Q05789 YPR010C-AYPR010C-A 219 nt-1.72□□□□□ -2.68
ATG38Q05789 YDL158CYDL158C 309 nt-1.73□□□□□ -2.69
ATG38Q05789 BIL1YOR304C-A 231 nt-1.73□□□□□ -2.69
ATG38Q05789 YOR314W-AYOR314W-A 111 nt-1.73□□□□□ -2.69
ATG38Q05789 YIL032CYIL032C 357 nt-1.78□□□□□ -2.69
ATG38Q05789 YBR285WYBR285W 435 nt-1.78□□□□□ -2.69
ATG38Q05789 YML099W-AYML099W-A 330 nt-1.79□□□□□ -2.7
ATG38Q05789 YBL039C-AYBL039C-A 84 nt-1.81□□□□□ -2.7
ATG38Q05789 YNL028WYNL028W 318 nt-1.81□□□□□ -2.7
ATG38Q05789 YEL050W-AYEL050W-A 192 nt-1.82□□□□□ -2.7
ATG38Q05789 tQ(UUG)QtQ(UUG)Q 76 nt-1.83□□□□□ -2.7
ATG38Q05789 HTL1YCR020W-B 237 nt-1.84□□□□□ -2.7
ATG38Q05789 snR74snR74 88 nt-1.87□□□□□ -2.71
ATG38Q05789 YNL324WYNL324W 396 nt-1.88□□□□□ -2.71
ATG38Q05789 tY(GUA)QtY(GUA)Q 84 nt-1.93□□□□□ -2.72
ATG38Q05789 YAL063C-AYAL063C-A 291 nt-1.94□□□□□ -2.72
ATG38Q05789 JLP2YMR132C 627 nt-1.94□□□□□ -2.72
ATG38Q05789 SKI7YOR076C 2244 nt-1.95□□□□□ -2.72
ATG38Q05789 YLR120W-AYLR120W-A 102 nt-1.96□□□□□ -2.72
ATG38Q05789 snR69snR69 101 nt-1.97□□□□□ -2.72
ATG38Q05789 snR189snR189 189 nt-1.97□□□□□ -2.72
ATG38Q05789 YER090C-AYER090C-A 90 nt-1.98□□□□□ -2.73
ATG38Q05789 YGR035CYGR035C 351 nt-1.98□□□□□ -2.73
ATG38Q05789 ATP6Q0085 780 nt-2.03□□□□□ -2.73
ATG38Q05789 YDR102CYDR102C 333 nt-2.04□□□□□ -2.74
ATG38Q05789 YNL266WYNL266W 420 nt-2.06□□□□□ -2.74
ATG38Q05789 YAL068W-AYAL068W-A 255 nt-2.07□□□□□ -2.74
ATG38Q05789 YFL032WYFL032W 321 nt-2.09□□□□□ -2.74
ATG38Q05789 RDS3YPR094W 324 nt-2.09□□□□□ -2.74
ATG38Q05789 snR50snR50 90 nt-2.09□□□□□ -2.74
ATG38Q05789 YER097WYER097W 330 nt-2.13□□□□□ -2.75
ATG38Q05789 PMP2YEL017C-A 132 nt-2.14□□□□□ -2.75
ATG38Q05789 YMR172C-AYMR172C-A 384 nt-2.18□□□□□ -2.76
ATG38Q05789 CDC65tQ(CUG)M 72 nt-2.19□□□□□ -2.76
ATG38Q05789 tM(CAU)Q2tM(CAU)Q2 78 nt-2.21□□□□□ -2.76
ATG38Q05789 YDR183C-AYDR183C-A 258 nt-2.22□□□□□ -2.76
ATG38Q05789 YGL041CYGL041C 204 nt-2.24□□□□□ -2.77
ATG38Q05789 YGR146C-AYGR146C-A 162 nt-2.24□□□□□ -2.77
ATG38Q05789 snR67snR67 82 nt-2.28□□□□□ -2.77
ATG38Q05789 YGR240C-AYGR240C-A 201 nt-2.28□□□□□ -2.77
ATG38Q05789 YNL205CYNL205C 423 nt-2.29□□□□□ -2.78
ATG38Q05789 snR39BsnR39B 96 nt-2.29□□□□□ -2.78
ATG38Q05789 snR81snR81 201 nt-2.3□□□□□ -2.78
Retrieved 100 of 7,029 protein–RNA pairs in 41 ms