Protein–RNA interactions for Protein: Q04338

VTI1, t-SNARE VTI1, yeastyeast

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VTI1Q04338 COX12YLR038C 252 nt0.61□□□□□ -2.31
VTI1Q04338 RPL26BYGR034W 384 nt0.6□□□□□ -2.31
VTI1Q04338 YLR282CYLR282C 342 nt0.6□□□□□ -2.31
VTI1Q04338 ABF2YMR072W 552 nt0.6□□□□□ -2.31
VTI1Q04338 snR55snR55 98 nt0.59□□□□□ -2.31
VTI1Q04338 YGL123C-AYGL123C-A 231 nt0.59□□□□□ -2.31
VTI1Q04338 YOL155W-AYOL155W-A 135 nt0.58□□□□□ -2.32
VTI1Q04338 MLP2YIL149C 5040 nt0.58□□□□□ -2.32
VTI1Q04338 YPR160W-AYPR160W-A 81 nt0.57□□□□□ -2.32
VTI1Q04338 FYV10YIL097W 1551 nt0.57□□□□□ -2.32
VTI1Q04338 PRP5YBR237W 2550 nt0.56□□□□□ -2.32
VTI1Q04338 YDR366CYDR366C 399 nt0.56□□□□□ -2.32
VTI1Q04338 YGL188C-AYGL188C-A 141 nt0.56□□□□□ -2.32
VTI1Q04338 COX5BYIL111W 456 nt0.56□□□□□ -2.32
VTI1Q04338 YBR182C-AYBR182C-A 195 nt0.56□□□□□ -2.32
VTI1Q04338 YKU70YMR284W 1809 nt0.55□□□□□ -2.32
VTI1Q04338 APQ12YIL040W 417 nt0.55□□□□□ -2.32
VTI1Q04338 MLP1YKR095W 5628 nt0.53□□□□□ -2.32
VTI1Q04338 snR8snR8 190 nt0.53□□□□□ -2.32
VTI1Q04338 YEL014CYEL014C 306 nt0.53□□□□□ -2.32
VTI1Q04338 BEM3YPL115C 3387 nt0.53□□□□□ -2.32
VTI1Q04338 OST4YDL232W 111 nt0.52□□□□□ -2.33
VTI1Q04338 YJL127W-AYJL127W-A 117 nt0.51□□□□□ -2.33
VTI1Q04338 YNL097C-BYNL097C-B 123 nt0.51□□□□□ -2.33
VTI1Q04338 SEC8YPR055W 3198 nt0.5□□□□□ -2.33
VTI1Q04338 BLI1YKL061W 342 nt0.5□□□□□ -2.33
VTI1Q04338 YSP1YHR155W 3687 nt0.5□□□□□ -2.33
VTI1Q04338 PRP42YDR235W 1635 nt0.49□□□□□ -2.33
VTI1Q04338 PAU12YGR294W 363 nt0.48□□□□□ -2.33
VTI1Q04338 YIL002W-AYIL002W-A 210 nt0.48□□□□□ -2.33
VTI1Q04338 YDR544CYDR544C 429 nt0.47□□□□□ -2.33
VTI1Q04338 YLR041WYLR041W 321 nt0.47□□□□□ -2.33
VTI1Q04338 YMR160WYMR160W 2451 nt0.46□□□□□ -2.34
VTI1Q04338 YLR399W-AYLR399W-A 105 nt0.46□□□□□ -2.34
VTI1Q04338 YJL182CYJL182C 318 nt0.45□□□□□ -2.34
VTI1Q04338 ORC3YLL004W 1851 nt0.45□□□□□ -2.34
VTI1Q04338 SNU13YEL026W 381 nt0.43□□□□□ -2.34
VTI1Q04338 SBH1YER087C-B 249 nt0.43□□□□□ -2.34
VTI1Q04338 PET111YMR257C 2403 nt0.43□□□□□ -2.34
VTI1Q04338 PRP39YML046W 1890 nt0.42□□□□□ -2.34
VTI1Q04338 YHR131W-AYHR131W-A 246 nt0.42□□□□□ -2.34
VTI1Q04338 YDR371C-AYDR371C-A 105 nt0.41□□□□□ -2.34
VTI1Q04338 FMP27YLR454W 7887 nt0.4□□□□□ -2.34
VTI1Q04338 TAH1YCR060W 336 nt0.4□□□□□ -2.35
VTI1Q04338 RPS26AYGL189C 360 nt0.4□□□□□ -2.35
VTI1Q04338 YMR158W-BYMR158W-B 321 nt0.4□□□□□ -2.35
VTI1Q04338 NNF2YGR089W 2811 nt0.4□□□□□ -2.35
VTI1Q04338 UTP8YGR128C 2142 nt0.4□□□□□ -2.35
VTI1Q04338 HAL9YOL089C 3093 nt0.39□□□□□ -2.35
VTI1Q04338 snR52snR52 92 nt0.39□□□□□ -2.35
VTI1Q04338 TRS65YGR166W 1683 nt0.38□□□□□ -2.35
VTI1Q04338 YBL039C-AYBL039C-A 84 nt0.38□□□□□ -2.35
VTI1Q04338 YKL100W-AYKL100W-A 90 nt0.37□□□□□ -2.35
VTI1Q04338 YLL006W-AYLL006W-A 177 nt0.37□□□□□ -2.35
VTI1Q04338 JLP2YMR132C 627 nt0.36□□□□□ -2.35
VTI1Q04338 ULP2YIL031W 3105 nt0.35□□□□□ -2.35
VTI1Q04338 SDH6YDR379C-A 240 nt0.35□□□□□ -2.35
VTI1Q04338 YLR232WYLR232W 348 nt0.35□□□□□ -2.35
VTI1Q04338 YBR072C-AYBR072C-A 162 nt0.34□□□□□ -2.36
VTI1Q04338 NIP1YMR309C 2439 nt0.33□□□□□ -2.36
VTI1Q04338 YGL182CYGL182C 324 nt0.33□□□□□ -2.36
VTI1Q04338 SPG3YDR504C 384 nt0.32□□□□□ -2.36
VTI1Q04338 YEL073CYEL073C 324 nt0.32□□□□□ -2.36
VTI1Q04338 BUL2YML111W 2763 nt0.31□□□□□ -2.36
VTI1Q04338 snR46snR46 197 nt0.31□□□□□ -2.36
VTI1Q04338 YJL150WYJL150W 303 nt0.3□□□□□ -2.36
VTI1Q04338 YOR381W-AYOR381W-A 168 nt0.3□□□□□ -2.36
VTI1Q04338 RCO1YMR075W 2055 nt0.29□□□□□ -2.36
VTI1Q04338 COG6YNL041C 2520 nt0.28□□□□□ -2.36
VTI1Q04338 THO2YNL139C 4794 nt0.28□□□□□ -2.37
VTI1Q04338 CSE1YGL238W 2883 nt0.27□□□□□ -2.37
VTI1Q04338 YNL054W-BYNL054W-B 5250 nt0.27□□□□□ -2.37
VTI1Q04338 YDR406W-AYDR406W-A 246 nt0.27□□□□□ -2.37
VTI1Q04338 STF2YGR008C 255 nt0.27□□□□□ -2.37
VTI1Q04338 YBL053WYBL053W 375 nt0.26□□□□□ -2.37
VTI1Q04338 UTP20YBL004W 7482 nt0.25□□□□□ -2.37
VTI1Q04338 snR39BsnR39B 96 nt0.24□□□□□ -2.37
VTI1Q04338 YDR210WYDR210W 228 nt0.23□□□□□ -2.37
VTI1Q04338 YNL198CYNL198C 303 nt0.23□□□□□ -2.37
VTI1Q04338 YOR329W-AYOR329W-A 210 nt0.23□□□□□ -2.37
VTI1Q04338 BIR1YJR089W 2865 nt0.23□□□□□ -2.37
VTI1Q04338 YOL013W-AYOL013W-A 192 nt0.22□□□□□ -2.37
VTI1Q04338 YOR314W-AYOR314W-A 111 nt0.22□□□□□ -2.37
VTI1Q04338 YBL100W-BYBL100W-B 5313 nt0.21□□□□□ -2.38
VTI1Q04338 GLG1YKR058W 1851 nt0.2□□□□□ -2.38
VTI1Q04338 YLR342W-AYLR342W-A 174 nt0.2□□□□□ -2.38
VTI1Q04338 tL(UAA)QtL(UAA)Q 85 nt0.19□□□□□ -2.38
VTI1Q04338 YKL145W-AYKL145W-A 93 nt0.19□□□□□ -2.38
VTI1Q04338 HUG1YML058W-A 207 nt0.18□□□□□ -2.38
VTI1Q04338 YOR170WYOR170W 306 nt0.17□□□□□ -2.38
VTI1Q04338 QCR9YGR183C 201 nt0.16□□□□□ -2.38
VTI1Q04338 YMR046W-AYMR046W-A 129 nt0.16□□□□□ -2.38
VTI1Q04338 EST1YLR233C 2100 nt0.13□□□□□ -2.39
VTI1Q04338 AI1Q0050 2505 nt0.13□□□□□ -2.39
VTI1Q04338 tM(CAU)Q2tM(CAU)Q2 78 nt0.13□□□□□ -2.39
VTI1Q04338 YBR099CYBR099C 384 nt0.13□□□□□ -2.39
VTI1Q04338 ESP1YGR098C 4893 nt0.13□□□□□ -2.39
VTI1Q04338 SOV1YMR066W 2697 nt0.11□□□□□ -2.39
VTI1Q04338 YHL015W-AYHL015W-A 84 nt0.1□□□□□ -2.39
VTI1Q04338 YLR466C-BYLR466C-B 117 nt0.1□□□□□ -2.39
Retrieved 100 of 7,029 protein–RNA pairs in 50.1 ms