Protein–RNA interactions for Protein: P53540

SPC98, Spindle pole body component SPC98, yeastyeast

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SPC98P53540 SSK2YNR031C 4740 nt1.43□□□□□ -2.18
SPC98P53540 SPC110YDR356W 2835 nt1.43□□□□□ -2.18
SPC98P53540 YDR524C-AYDR524C-A 120 nt1.43□□□□□ -2.18
SPC98P53540 YBL109WYBL109W 336 nt1.43□□□□□ -2.18
SPC98P53540 CCH1YGR217W 6120 nt1.43□□□□□ -2.18
SPC98P53540 ROM2YLR371W 4071 nt1.43□□□□□ -2.18
SPC98P53540 YML002WYML002W 2214 nt1.42□□□□□ -2.18
SPC98P53540 tQ(UUG)E2tQ(UUG)E2 72 nt1.42□□□□□ -2.18
SPC98P53540 NUP188YML103C 4968 nt1.42□□□□□ -2.18
SPC98P53540 PIK1YNL267W 3201 nt1.41□□□□□ -2.18
SPC98P53540 NUP157YER105C 4176 nt1.41□□□□□ -2.18
SPC98P53540 YCR095W-AYCR095W-A 159 nt1.41□□□□□ -2.18
SPC98P53540 HUG1YML058W-A 207 nt1.41□□□□□ -2.18
SPC98P53540 YBR099CYBR099C 384 nt1.41□□□□□ -2.18
SPC98P53540 AZF1YOR113W 2745 nt1.41□□□□□ -2.18
SPC98P53540 WAR1YML076C 2835 nt1.41□□□□□ -2.18
SPC98P53540 TAH1YCR060W 336 nt1.4□□□□□ -2.19
SPC98P53540 LAA1YJL207C 6045 nt1.4□□□□□ -2.19
SPC98P53540 GEA2YEL022W 4380 nt1.39□□□□□ -2.19
SPC98P53540 FYV8YGR196C 2454 nt1.39□□□□□ -2.19
SPC98P53540 YDR544CYDR544C 429 nt1.39□□□□□ -2.19
SPC98P53540 STF2YGR008C 255 nt1.39□□□□□ -2.19
SPC98P53540 NUP145YGL092W 3954 nt1.38□□□□□ -2.19
SPC98P53540 snR190snR190 190 nt1.38□□□□□ -2.19
SPC98P53540 snR39BsnR39B 96 nt1.38□□□□□ -2.19
SPC98P53540 RAD9YDR217C 3930 nt1.37□□□□□ -2.19
SPC98P53540 EST2YLR318W 2655 nt1.37□□□□□ -2.19
SPC98P53540 RPM2YML091C 3609 nt1.37□□□□□ -2.19
SPC98P53540 RPL26BYGR034W 384 nt1.37□□□□□ -2.19
SPC98P53540 YNL067W-BYNL067W-B 141 nt1.37□□□□□ -2.19
SPC98P53540 FYV10YIL097W 1551 nt1.37□□□□□ -2.19
SPC98P53540 SOM1YEL059C-A 225 nt1.36□□□□□ -2.19
SPC98P53540 IML1YJR138W 4755 nt1.35□□□□□ -2.19
SPC98P53540 QCR9YGR183C 201 nt1.35□□□□□ -2.19
SPC98P53540 CLU1YMR012W 3834 nt1.35□□□□□ -2.19
SPC98P53540 YBR200W-AYBR200W-A 165 nt1.35□□□□□ -2.19
SPC98P53540 CDC39YCR093W 6327 nt1.35□□□□□ -2.19
SPC98P53540 SEC21YNL287W 2808 nt1.34□□□□□ -2.19
SPC98P53540 TFB5YDR079C-A 219 nt1.34□□□□□ -2.19
SPC98P53540 PMP2YEL017C-A 132 nt1.34□□□□□ -2.19
SPC98P53540 YNL103W-AYNL103W-A 90 nt1.34□□□□□ -2.19
SPC98P53540 YHR131W-AYHR131W-A 246 nt1.33□□□□□ -2.2
SPC98P53540 KAP120YPL125W 3099 nt1.33□□□□□ -2.2
SPC98P53540 COG6YNL041C 2520 nt1.32□□□□□ -2.2
SPC98P53540 MSN5YDR335W 3675 nt1.31□□□□□ -2.2
SPC98P53540 HKR1YDR420W 5409 nt1.31□□□□□ -2.2
SPC98P53540 YLR232WYLR232W 348 nt1.31□□□□□ -2.2
SPC98P53540 PRP16YKR086W 3216 nt1.3□□□□□ -2.2
SPC98P53540 YMR326CYMR326C 309 nt1.3□□□□□ -2.2
SPC98P53540 snR61snR61 90 nt1.29□□□□□ -2.2
SPC98P53540 YNL284C-BYNL284C-B 5268 nt1.28□□□□□ -2.2
SPC98P53540 tV(UAC)BtV(UAC)B 74 nt1.28□□□□□ -2.2
SPC98P53540 tV(UAC)DtV(UAC)D 74 nt1.28□□□□□ -2.2
SPC98P53540 SEC8YPR055W 3198 nt1.27□□□□□ -2.21
SPC98P53540 YDR210WYDR210W 228 nt1.27□□□□□ -2.21
SPC98P53540 tM(CAU)Q2tM(CAU)Q2 78 nt1.27□□□□□ -2.21
SPC98P53540 YDL073WYDL073W 2955 nt1.27□□□□□ -2.21
SPC98P53540 YHR217CYHR217C 462 nt1.26□□□□□ -2.21
SPC98P53540 SIP4YJL089W 2490 nt1.25□□□□□ -2.21
SPC98P53540 YPR160W-AYPR160W-A 81 nt1.24□□□□□ -2.21
SPC98P53540 RCO1YMR075W 2055 nt1.22□□□□□ -2.21
SPC98P53540 SBH1YER087C-B 249 nt1.22□□□□□ -2.21
SPC98P53540 YLR399W-AYLR399W-A 105 nt1.22□□□□□ -2.21
SPC98P53540 SEC1YDR164C 2175 nt1.21□□□□□ -2.22
SPC98P53540 tN(GUU)QtN(GUU)Q 71 nt1.2□□□□□ -2.22
SPC98P53540 YGR146C-AYGR146C-A 162 nt1.2□□□□□ -2.22
SPC98P53540 YJL127W-AYJL127W-A 117 nt1.18□□□□□ -2.22
SPC98P53540 YJR029WYJR029W 5268 nt1.17□□□□□ -2.22
SPC98P53540 YPR137C-BYPR137C-B 5268 nt1.17□□□□□ -2.22
SPC98P53540 BIR1YJR089W 2865 nt1.16□□□□□ -2.22
SPC98P53540 YSP1YHR155W 3687 nt1.15□□□□□ -2.23
SPC98P53540 YGL041C-BYGL041C-B 183 nt1.14□□□□□ -2.23
SPC98P53540 NST1YNL091W 3723 nt1.14□□□□□ -2.23
SPC98P53540 SPT7YBR081C 3999 nt1.11□□□□□ -2.23
SPC98P53540 YPL060C-AYPL060C-A 3315 nt1.1□□□□□ -2.23
SPC98P53540 BEM3YPL115C 3387 nt1.1□□□□□ -2.23
SPC98P53540 YNL266WYNL266W 420 nt1.1□□□□□ -2.23
SPC98P53540 ULP2YIL031W 3105 nt1.1□□□□□ -2.23
SPC98P53540 NNF2YGR089W 2811 nt1.08□□□□□ -2.24
SPC98P53540 YDL247W-AYDL247W-A 75 nt1.07□□□□□ -2.24
SPC98P53540 YBR072C-AYBR072C-A 162 nt1.07□□□□□ -2.24
SPC98P53540 BUD3YCL014W 4911 nt1.07□□□□□ -2.24
SPC98P53540 GLG1YKR058W 1851 nt1.07□□□□□ -2.24
SPC98P53540 UBP3YER151C 2739 nt1.05□□□□□ -2.24
SPC98P53540 snR81snR81 201 nt1.04□□□□□ -2.24
SPC98P53540 tS(GCU)Q1tS(GCU)Q1 86 nt1.01□□□□□ -2.25
SPC98P53540 YAL037C-AYAL037C-A 93 nt1.01□□□□□ -2.25
SPC98P53540 VAM6YDL077C 3150 nt1□□□□□ -2.25
SPC98P53540 BEM2YER155C 6504 nt1□□□□□ -2.25
SPC98P53540 RKR1YMR247C 4689 nt1□□□□□ -2.25
SPC98P53540 SEC10YLR166C 2616 nt0.98□□□□□ -2.25
SPC98P53540 PAU12YGR294W 363 nt0.97□□□□□ -2.25
SPC98P53540 PAU24YBR301W 363 nt0.97□□□□□ -2.25
SPC98P53540 YPR117WYPR117W 7470 nt0.97□□□□□ -2.25
SPC98P53540 YBR196C-AYBR196C-A 150 nt0.95□□□□□ -2.26
SPC98P53540 BUL2YML111W 2763 nt0.94□□□□□ -2.26
SPC98P53540 YIL142C-AYIL142C-A 333 nt0.94□□□□□ -2.26
SPC98P53540 YLL006W-AYLL006W-A 177 nt0.94□□□□□ -2.26
SPC98P53540 SCC2YDR180W 4482 nt0.94□□□□□ -2.26
SPC98P53540 tF(GAA)BtF(GAA)B 73 nt0.93□□□□□ -2.26
Retrieved 100 of 7,029 protein–RNA pairs in 94.7 ms