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Protein–RNA interactions for Protein: P47057
SNX4, Sorting nexin-4, yeast
Predictions only
Length
423 aa
.
Download Table
Protein
RNA
Prediction (catRAPID)
Interaction (RIP-Chip)
Gene
UniProt Accession
Gene
Ensembl Transcript ID
Length
Transcript Status
Prediction Score
Prediction z-Score
Detected Interaction
SNX4
P47057
ATP6
Q0085
780 nt
0.24
□□□□□ -2.37
SNX4
P47057
YGL123C-A
YGL123C-A
231 nt
0.24
□□□□□ -2.37
SNX4
P47057
MYO1
YHR023W
5787 nt
0.23
□□□□□ -2.37
SNX4
P47057
ORC3
YLL004W
1851 nt
0.23
□□□□□ -2.37
SNX4
P47057
NNF2
YGR089W
2811 nt
0.23
□□□□□ -2.37
SNX4
P47057
YDR371C-A
YDR371C-A
105 nt
0.23
□□□□□ -2.37
SNX4
P47057
YFL032W
YFL032W
321 nt
0.23
□□□□□ -2.37
SNX4
P47057
YNL028W
YNL028W
318 nt
0.23
□□□□□ -2.37
SNX4
P47057
YOR015W
YOR015W
360 nt
0.23
□□□□□ -2.37
SNX4
P47057
RPS26A
YGL189C
360 nt
0.22
□□□□□ -2.37
SNX4
P47057
YGR069W
YGR069W
336 nt
0.21
□□□□□ -2.38
SNX4
P47057
ESP1
YGR098C
4893 nt
0.21
□□□□□ -2.38
SNX4
P47057
BLI1
YKL061W
342 nt
0.2
□□□□□ -2.38
SNX4
P47057
GIM4
YEL003W
336 nt
0.19
□□□□□ -2.38
SNX4
P47057
YER078W-A
YER078W-A
165 nt
0.19
□□□□□ -2.38
SNX4
P47057
YLR041W
YLR041W
321 nt
0.19
□□□□□ -2.38
SNX4
P47057
NIP1
YMR309C
2439 nt
0.18
□□□□□ -2.38
SNX4
P47057
YDR413C
YDR413C
576 nt
0.18
□□□□□ -2.38
SNX4
P47057
YKL118W
YKL118W
312 nt
0.18
□□□□□ -2.38
SNX4
P47057
YLR120W-A
YLR120W-A
102 nt
0.18
□□□□□ -2.38
SNX4
P47057
YNL146W
YNL146W
303 nt
0.18
□□□□□ -2.38
SNX4
P47057
YOR072W-B
YOR072W-B
162 nt
0.18
□□□□□ -2.38
SNX4
P47057
MLP2
YIL149C
5040 nt
0.17
□□□□□ -2.38
SNX4
P47057
RCO1
YMR075W
2055 nt
0.17
□□□□□ -2.38
SNX4
P47057
YER097W
YER097W
330 nt
0.17
□□□□□ -2.38
SNX4
P47057
YHR131W-A
YHR131W-A
246 nt
0.16
□□□□□ -2.38
SNX4
P47057
YKL100W-A
YKL100W-A
90 nt
0.16
□□□□□ -2.38
SNX4
P47057
YLL006W-A
YLL006W-A
177 nt
0.16
□□□□□ -2.38
SNX4
P47057
YNL054W-B
YNL054W-B
5250 nt
0.16
□□□□□ -2.38
SNX4
P47057
BUL2
YML111W
2763 nt
0.16
□□□□□ -2.38
SNX4
P47057
RAD61
YDR014W
1944 nt
0.15
□□□□□ -2.39
SNX4
P47057
snR74
snR74
88 nt
0.15
□□□□□ -2.39
SNX4
P47057
YER053C-A
YER053C-A
114 nt
0.15
□□□□□ -2.39
SNX4
P47057
YHR175W-A
YHR175W-A
150 nt
0.15
□□□□□ -2.39
SNX4
P47057
COX12
YLR038C
252 nt
0.15
□□□□□ -2.39
SNX4
P47057
YOL013W-A
YOL013W-A
192 nt
0.15
□□□□□ -2.39
SNX4
P47057
YDR366C
YDR366C
399 nt
0.14
□□□□□ -2.39
SNX4
P47057
SNU13
YEL026W
381 nt
0.14
□□□□□ -2.39
SNX4
P47057
RPL39
YJL189W
156 nt
0.14
□□□□□ -2.39
SNX4
P47057
YMR172C-A
YMR172C-A
384 nt
0.13
□□□□□ -2.39
SNX4
P47057
snR56
snR56
88 nt
0.11
□□□□□ -2.39
SNX4
P47057
HMRA1
YCR097W
381 nt
0.11
□□□□□ -2.39
SNX4
P47057
YGL052W
YGL052W
306 nt
0.11
□□□□□ -2.39
SNX4
P47057
tR(ACG)Q2
tR(ACG)Q2
74 nt
0.1
□□□□□ -2.39
SNX4
P47057
PRP39
YML046W
1890 nt
0.1
□□□□□ -2.39
SNX4
P47057
YCR038W-A
YCR038W-A
126 nt
0.09
□□□□□ -2.4
SNX4
P47057
YEL073C
YEL073C
324 nt
0.09
□□□□□ -2.4
SNX4
P47057
YOR186C-A
YOR186C-A
210 nt
0.08
□□□□□ -2.4
SNX4
P47057
YIL002W-A
YIL002W-A
210 nt
0.07
□□□□□ -2.4
SNX4
P47057
YOR008C-A
YOR008C-A
225 nt
0.07
□□□□□ -2.4
SNX4
P47057
YBR072C-A
YBR072C-A
162 nt
0.07
□□□□□ -2.4
SNX4
P47057
YKU70
YMR284W
1809 nt
0.07
□□□□□ -2.4
SNX4
P47057
YNL277W-A
YNL277W-A
189 nt
0.05
□□□□□ -2.4
SNX4
P47057
UTP8
YGR128C
2142 nt
0.05
□□□□□ -2.4
SNX4
P47057
YIR030W-A
YIR030W-A
384 nt
0.02
□□□□□ -2.41
SNX4
P47057
YLR232W
YLR232W
348 nt
0.02
□□□□□ -2.41
SNX4
P47057
YMR158W-B
YMR158W-B
321 nt
0.02
□□□□□ -2.41
SNX4
P47057
APQ12
YIL040W
417 nt
0.01
□□□□□ -2.41
SNX4
P47057
snR45
snR45
172 nt
0.01
□□□□□ -2.41
SNX4
P47057
SOV1
YMR066W
2697 nt
0
□□□□□ -2.41
SNX4
P47057
SDH6
YDR379C-A
240 nt
0
□□□□□ -2.41
SNX4
P47057
YPR010C-A
YPR010C-A
219 nt
0
□□□□□ -2.41
SNX4
P47057
TAH1
YCR060W
336 nt
-0.02
□□□□□ -2.41
SNX4
P47057
GLG1
YKR058W
1851 nt
-0.02
□□□□□ -2.41
SNX4
P47057
tF(GAA)Q
tF(GAA)Q
75 nt
-0.03
□□□□□ -2.41
SNX4
P47057
YBR182C-A
YBR182C-A
195 nt
-0.03
□□□□□ -2.41
SNX4
P47057
CSE1
YGL238W
2883 nt
-0.03
□□□□□ -2.41
SNX4
P47057
YDR544C
YDR544C
429 nt
-0.04
□□□□□ -2.42
SNX4
P47057
YDR524W-C
YDR524W-C
90 nt
-0.06
□□□□□ -2.42
SNX4
P47057
YBR099C
YBR099C
384 nt
-0.06
□□□□□ -2.42
SNX4
P47057
YGL041C
YGL041C
204 nt
-0.07
□□□□□ -2.42
SNX4
P47057
snR65
snR65
100 nt
-0.08
□□□□□ -2.42
SNX4
P47057
YBL039C-A
YBL039C-A
84 nt
-0.09
□□□□□ -2.42
SNX4
P47057
COG6
YNL041C
2520 nt
-0.09
□□□□□ -2.42
SNX4
P47057
snR55
snR55
98 nt
-0.1
□□□□□ -2.43
SNX4
P47057
YBR131C-A
YBR131C-A
90 nt
-0.1
□□□□□ -2.43
SNX4
P47057
snR49
snR49
165 nt
-0.1
□□□□□ -2.43
SNX4
P47057
TFB5
YDR079C-A
219 nt
-0.11
□□□□□ -2.43
SNX4
P47057
YER181C
YER181C
324 nt
-0.11
□□□□□ -2.43
SNX4
P47057
snR128
snR128
126 nt
-0.11
□□□□□ -2.43
SNX4
P47057
EST1
YLR233C
2100 nt
-0.11
□□□□□ -2.43
SNX4
P47057
YML099W-A
YML099W-A
330 nt
-0.12
□□□□□ -2.43
SNX4
P47057
snR8
snR8
190 nt
-0.14
□□□□□ -2.43
SNX4
P47057
YGL182C
YGL182C
324 nt
-0.14
□□□□□ -2.43
SNX4
P47057
YPL152W-A
YPL152W-A
99 nt
-0.14
□□□□□ -2.43
SNX4
P47057
YEL014C
YEL014C
306 nt
-0.15
□□□□□ -2.43
SNX4
P47057
YOR314W-A
YOR314W-A
111 nt
-0.15
□□□□□ -2.43
SNX4
P47057
YOL155W-A
YOL155W-A
135 nt
-0.16
□□□□□ -2.44
SNX4
P47057
YDR210W
YDR210W
228 nt
-0.17
□□□□□ -2.44
SNX4
P47057
YJL182C
YJL182C
318 nt
-0.17
□□□□□ -2.44
SNX4
P47057
YGR164W
YGR164W
336 nt
-0.18
□□□□□ -2.44
SNX4
P47057
snR46
snR46
197 nt
-0.18
□□□□□ -2.44
SNX4
P47057
RPM2
YML091C
3609 nt
-0.19
□□□□□ -2.44
SNX4
P47057
YNL097C-B
YNL097C-B
123 nt
-0.19
□□□□□ -2.44
SNX4
P47057
YOR231C-A
YOR231C-A
201 nt
-0.19
□□□□□ -2.44
SNX4
P47057
YPL060C-A
YPL060C-A
3315 nt
-0.2
□□□□□ -2.44
SNX4
P47057
YOR302W
YOR302W
78 nt
-0.2
□□□□□ -2.44
SNX4
P47057
YOR381W-A
YOR381W-A
168 nt
-0.22
□□□□□ -2.44
SNX4
P47057
YGL188C-A
YGL188C-A
141 nt
-0.25
□□□□□ -2.45
SNX4
P47057
SBH2
YER019C-A
267 nt
-0.27
□□□□□ -2.45
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Retrieved 100 of 7,029 protein–RNA pairs in 12.6 ms