Protein–RNA interactions for Protein: P46673

NUP85, Nucleoporin NUP85, yeastyeast

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NUP85P46673 MGA2YIR033W 3342 nt2.2□□□□□ -2.06
NUP85P46673 SIR4YDR227W 4077 nt2.2□□□□□ -2.06
NUP85P46673 TFC3YAL001C 3483 nt2.2□□□□□ -2.06
NUP85P46673 INO80YGL150C 4470 nt2.19□□□□□ -2.06
NUP85P46673 YOL098CYOL098C 3114 nt2.18□□□□□ -2.06
NUP85P46673 KOG1YHR186C 4674 nt2.18□□□□□ -2.06
NUP85P46673 YLR299C-AYLR299C-A 93 nt2.18□□□□□ -2.06
NUP85P46673 SEC16YPL085W 6588 nt2.18□□□□□ -2.06
NUP85P46673 RAD50YNL250W 3939 nt2.18□□□□□ -2.06
NUP85P46673 tD(GUC)QtD(GUC)Q 75 nt2.17□□□□□ -2.06
NUP85P46673 UTP21YLR409C 2820 nt2.17□□□□□ -2.06
NUP85P46673 RTT101YJL047C 2529 nt2.17□□□□□ -2.06
NUP85P46673 CHS1YNL192W 3396 nt2.14□□□□□ -2.07
NUP85P46673 SSD1YDR293C 3753 nt2.14□□□□□ -2.07
NUP85P46673 ANS1YHR126C 480 nt2.14□□□□□ -2.07
NUP85P46673 USO1YDL058W 5373 nt2.14□□□□□ -2.07
NUP85P46673 BEM3YPL115C 3387 nt2.14□□□□□ -2.07
NUP85P46673 UBR2YLR024C 5619 nt2.12□□□□□ -2.07
NUP85P46673 snR14snR14 160 nt2.12□□□□□ -2.07
NUP85P46673 UTP22YGR090W 3714 nt2.12□□□□□ -2.07
NUP85P46673 BRE1YDL074C 2103 nt2.12□□□□□ -2.07
NUP85P46673 PKH3YDR466W 2697 nt2.12□□□□□ -2.07
NUP85P46673 MSH6YDR097C 3729 nt2.11□□□□□ -2.07
NUP85P46673 SAC3YDR159W 3906 nt2.11□□□□□ -2.07
NUP85P46673 SKI7YOR076C 2244 nt2.1□□□□□ -2.07
NUP85P46673 DGR1YNL130C-A 147 nt2.1□□□□□ -2.07
NUP85P46673 snR38snR38 95 nt2.1□□□□□ -2.07
NUP85P46673 AI1Q0050 2505 nt2.1□□□□□ -2.07
NUP85P46673 RPL41AYDL184C 78 nt2.09□□□□□ -2.07
NUP85P46673 KIP1YBL063W 3336 nt2.09□□□□□ -2.08
NUP85P46673 YDL159C-BYDL159C-B 177 nt2.08□□□□□ -2.08
NUP85P46673 EMC5YIL027C 426 nt2.08□□□□□ -2.08
NUP85P46673 YML054C-AYML054C-A 159 nt2.08□□□□□ -2.08
NUP85P46673 YPR160W-AYPR160W-A 81 nt2.08□□□□□ -2.08
NUP85P46673 YGR122C-AYGR122C-A 129 nt2.07□□□□□ -2.08
NUP85P46673 EST1YLR233C 2100 nt2.07□□□□□ -2.08
NUP85P46673 PET127YOR017W 2403 nt2.06□□□□□ -2.08
NUP85P46673 TDA9YML081W 3756 nt2.06□□□□□ -2.08
NUP85P46673 ROM2YLR371W 4071 nt2.06□□□□□ -2.08
NUP85P46673 GEA2YEL022W 4380 nt2.05□□□□□ -2.08
NUP85P46673 NEO1YIL048W 3456 nt2.05□□□□□ -2.08
NUP85P46673 YHR180C-BYHR180C-B 105 nt2.05□□□□□ -2.08
NUP85P46673 SEC31YDL195W 3822 nt2.04□□□□□ -2.08
NUP85P46673 YBR296C-AYBR296C-A 120 nt2.04□□□□□ -2.08
NUP85P46673 SMC4YLR086W 4257 nt2.04□□□□□ -2.08
NUP85P46673 YMR045CYMR045C 5268 nt2.04□□□□□ -2.08
NUP85P46673 STO1YMR125W 2586 nt2.04□□□□□ -2.08
NUP85P46673 TOR2YKL203C 7425 nt2.03□□□□□ -2.08
NUP85P46673 KAP122YGL016W 3246 nt2.03□□□□□ -2.08
NUP85P46673 ATG9YDL149W 2994 nt2.03□□□□□ -2.08
NUP85P46673 SPP41YDR464W 4308 nt2.03□□□□□ -2.09
NUP85P46673 snR69snR69 101 nt2.02□□□□□ -2.09
NUP85P46673 UBP2YOR124C 3819 nt2.02□□□□□ -2.09
NUP85P46673 HER1YOR227W 3741 nt2.02□□□□□ -2.09
NUP85P46673 TMA7YLR262C-A 195 nt2.01□□□□□ -2.09
NUP85P46673 NIP1YMR309C 2439 nt2□□□□□ -2.09
NUP85P46673 tN(GUU)QtN(GUU)Q 71 nt1.99□□□□□ -2.09
NUP85P46673 PRP16YKR086W 3216 nt1.97□□□□□ -2.09
NUP85P46673 YLR422WYLR422W 5799 nt1.97□□□□□ -2.09
NUP85P46673 FAB1YFR019W 6837 nt1.97□□□□□ -2.09
NUP85P46673 MYO4YAL029C 4416 nt1.96□□□□□ -2.1
NUP85P46673 CSE1YGL238W 2883 nt1.95□□□□□ -2.1
NUP85P46673 RDS3YPR094W 324 nt1.94□□□□□ -2.1
NUP85P46673 SEC8YPR055W 3198 nt1.93□□□□□ -2.1
NUP85P46673 YHR214C-BYHR214C-B 5382 nt1.93□□□□□ -2.1
NUP85P46673 ULP2YIL031W 3105 nt1.92□□□□□ -2.1
NUP85P46673 IRC20YLR247C 4671 nt1.92□□□□□ -2.1
NUP85P46673 FKS1YLR342W 5631 nt1.92□□□□□ -2.1
NUP85P46673 SXM1YDR395W 2835 nt1.91□□□□□ -2.1
NUP85P46673 SEC3YER008C 4011 nt1.91□□□□□ -2.1
NUP85P46673 KCS1YDR017C 3153 nt1.9□□□□□ -2.1
NUP85P46673 YSP1YHR155W 3687 nt1.89□□□□□ -2.11
NUP85P46673 YCS4YLR272C 3531 nt1.89□□□□□ -2.11
NUP85P46673 SKI3YPR189W 4299 nt1.89□□□□□ -2.11
NUP85P46673 YPL060C-AYPL060C-A 3315 nt1.88□□□□□ -2.11
NUP85P46673 PET111YMR257C 2403 nt1.87□□□□□ -2.11
NUP85P46673 YLR399W-AYLR399W-A 105 nt1.87□□□□□ -2.11
NUP85P46673 MON2YNL297C 4911 nt1.86□□□□□ -2.11
NUP85P46673 tT(UGU)HtT(UGU)H 72 nt1.86□□□□□ -2.11
NUP85P46673 YMR247W-AYMR247W-A 144 nt1.86□□□□□ -2.11
NUP85P46673 NST1YNL091W 3723 nt1.86□□□□□ -2.11
NUP85P46673 MSH3YCR092C 3057 nt1.85□□□□□ -2.11
NUP85P46673 APL3YBL037W 3078 nt1.85□□□□□ -2.11
NUP85P46673 YOR093CYOR093C 4947 nt1.85□□□□□ -2.11
NUP85P46673 HUG1YML058W-A 207 nt1.83□□□□□ -2.12
NUP85P46673 PMD1YER132C 5262 nt1.83□□□□□ -2.12
NUP85P46673 TRM732YMR259C 4263 nt1.82□□□□□ -2.12
NUP85P46673 PEP1YBL017C 4740 nt1.81□□□□□ -2.12
NUP85P46673 PAU12YGR294W 363 nt1.8□□□□□ -2.12
NUP85P46673 MSN5YDR335W 3675 nt1.79□□□□□ -2.12
NUP85P46673 EST2YLR318W 2655 nt1.79□□□□□ -2.12
NUP85P46673 SWI4YER111C 3282 nt1.79□□□□□ -2.12
NUP85P46673 YMR272W-BYMR272W-B 108 nt1.78□□□□□ -2.12
NUP85P46673 DNF3YMR162C 4971 nt1.78□□□□□ -2.13
NUP85P46673 CDC25YLR310C 4770 nt1.77□□□□□ -2.13
NUP85P46673 YJL077W-AYJL077W-A 87 nt1.75□□□□□ -2.13
NUP85P46673 BUL2YML111W 2763 nt1.74□□□□□ -2.13
NUP85P46673 SIP4YJL089W 2490 nt1.74□□□□□ -2.13
NUP85P46673 VPS15YBR097W 4365 nt1.73□□□□□ -2.13
NUP85P46673 NUP188YML103C 4968 nt1.72□□□□□ -2.13
Retrieved 100 of 7,029 protein–RNA pairs in 60.4 ms