Protein–RNA interactions for Protein: P39980

SIT1, Siderophore iron transporter 1, yeastyeast

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SIT1P39980 CDC39YCR093W 6327 nt1.48□□□□□ -2.17
SIT1P39980 SEC3YER008C 4011 nt1.47□□□□□ -2.17
SIT1P39980 MSN5YDR335W 3675 nt1.47□□□□□ -2.17
SIT1P39980 CCH1YGR217W 6120 nt1.47□□□□□ -2.17
SIT1P39980 YDR544CYDR544C 429 nt1.46□□□□□ -2.18
SIT1P39980 RAD9YDR217C 3930 nt1.45□□□□□ -2.18
SIT1P39980 OST4YDL232W 111 nt1.45□□□□□ -2.18
SIT1P39980 YMR272W-BYMR272W-B 108 nt1.45□□□□□ -2.18
SIT1P39980 YBR099CYBR099C 384 nt1.45□□□□□ -2.18
SIT1P39980 YCR095W-AYCR095W-A 159 nt1.44□□□□□ -2.18
SIT1P39980 PRP16YKR086W 3216 nt1.44□□□□□ -2.18
SIT1P39980 SOM1YEL059C-A 225 nt1.43□□□□□ -2.18
SIT1P39980 tM(CAU)Q2tM(CAU)Q2 78 nt1.43□□□□□ -2.18
SIT1P39980 snR39BsnR39B 96 nt1.43□□□□□ -2.18
SIT1P39980 SEC8YPR055W 3198 nt1.43□□□□□ -2.18
SIT1P39980 YIL071W-AYIL071W-A 477 nt1.42□□□□□ -2.18
SIT1P39980 IRA1YBR140C 9279 nt1.41□□□□□ -2.18
SIT1P39980 CDC25YLR310C 4770 nt1.4□□□□□ -2.19
SIT1P39980 YHR131W-AYHR131W-A 246 nt1.39□□□□□ -2.19
SIT1P39980 HKR1YDR420W 5409 nt1.39□□□□□ -2.19
SIT1P39980 ROM2YLR371W 4071 nt1.38□□□□□ -2.19
SIT1P39980 BEM3YPL115C 3387 nt1.38□□□□□ -2.19
SIT1P39980 tN(GUU)QtN(GUU)Q 71 nt1.37□□□□□ -2.19
SIT1P39980 YPR160W-AYPR160W-A 81 nt1.36□□□□□ -2.19
SIT1P39980 PMP2YEL017C-A 132 nt1.35□□□□□ -2.19
SIT1P39980 YLR399W-AYLR399W-A 105 nt1.35□□□□□ -2.19
SIT1P39980 BRR2YER172C 6492 nt1.35□□□□□ -2.19
SIT1P39980 MEC1YBR136W 7107 nt1.34□□□□□ -2.19
SIT1P39980 CLU1YMR012W 3834 nt1.34□□□□□ -2.19
SIT1P39980 FIG2YCR089W 4830 nt1.34□□□□□ -2.2
SIT1P39980 YDR210WYDR210W 228 nt1.33□□□□□ -2.2
SIT1P39980 YDL073WYDL073W 2955 nt1.33□□□□□ -2.2
SIT1P39980 YJL127W-AYJL127W-A 117 nt1.32□□□□□ -2.2
SIT1P39980 KAP120YPL125W 3099 nt1.32□□□□□ -2.2
SIT1P39980 COG6YNL041C 2520 nt1.32□□□□□ -2.2
SIT1P39980 SPT7YBR081C 3999 nt1.32□□□□□ -2.2
SIT1P39980 YNL103W-AYNL103W-A 90 nt1.29□□□□□ -2.2
SIT1P39980 UBP3YER151C 2739 nt1.25□□□□□ -2.21
SIT1P39980 TFB5YDR079C-A 219 nt1.25□□□□□ -2.21
SIT1P39980 YSP1YHR155W 3687 nt1.25□□□□□ -2.21
SIT1P39980 SEC1YDR164C 2175 nt1.25□□□□□ -2.21
SIT1P39980 YGR146C-AYGR146C-A 162 nt1.24□□□□□ -2.21
SIT1P39980 SCC2YDR180W 4482 nt1.24□□□□□ -2.21
SIT1P39980 YDR524C-AYDR524C-A 120 nt1.23□□□□□ -2.21
SIT1P39980 STF2YGR008C 255 nt1.23□□□□□ -2.21
SIT1P39980 BEM2YER155C 6504 nt1.22□□□□□ -2.21
SIT1P39980 YBL109WYBL109W 336 nt1.21□□□□□ -2.22
SIT1P39980 YGR130CYGR130C 2451 nt1.2□□□□□ -2.22
SIT1P39980 YBR072C-AYBR072C-A 162 nt1.2□□□□□ -2.22
SIT1P39980 YNL284C-BYNL284C-B 5268 nt1.19□□□□□ -2.22
SIT1P39980 LAA1YJL207C 6045 nt1.19□□□□□ -2.22
SIT1P39980 NUP192YJL039C 5052 nt1.19□□□□□ -2.22
SIT1P39980 snR61snR61 90 nt1.18□□□□□ -2.22
SIT1P39980 BIR1YJR089W 2865 nt1.16□□□□□ -2.22
SIT1P39980 YMR326CYMR326C 309 nt1.16□□□□□ -2.22
SIT1P39980 RKR1YMR247C 4689 nt1.16□□□□□ -2.22
SIT1P39980 GLG1YKR058W 1851 nt1.16□□□□□ -2.22
SIT1P39980 RCO1YMR075W 2055 nt1.12□□□□□ -2.23
SIT1P39980 CAT8YMR280C 4302 nt1.12□□□□□ -2.23
SIT1P39980 NST1YNL091W 3723 nt1.12□□□□□ -2.23
SIT1P39980 ULP2YIL031W 3105 nt1.12□□□□□ -2.23
SIT1P39980 VAM6YDL077C 3150 nt1.12□□□□□ -2.23
SIT1P39980 YNL266WYNL266W 420 nt1.12□□□□□ -2.23
SIT1P39980 YBR178WYBR178W 375 nt1.12□□□□□ -2.23
SIT1P39980 MSH3YCR092C 3057 nt1.11□□□□□ -2.23
SIT1P39980 DOP1YDR141C 5097 nt1.1□□□□□ -2.23
SIT1P39980 YLL006W-AYLL006W-A 177 nt1.1□□□□□ -2.23
SIT1P39980 RPM2YML091C 3609 nt1.1□□□□□ -2.23
SIT1P39980 BUD3YCL014W 4911 nt1.1□□□□□ -2.23
SIT1P39980 YGL041C-BYGL041C-B 183 nt1.09□□□□□ -2.23
SIT1P39980 NNF2YGR089W 2811 nt1.07□□□□□ -2.24
SIT1P39980 CSE1YGL238W 2883 nt1.06□□□□□ -2.24
SIT1P39980 YJR029WYJR029W 5268 nt1.04□□□□□ -2.24
SIT1P39980 YPR137C-BYPR137C-B 5268 nt1.04□□□□□ -2.24
SIT1P39980 YHR217CYHR217C 462 nt1.04□□□□□ -2.24
SIT1P39980 YPR117WYPR117W 7470 nt1.03□□□□□ -2.24
SIT1P39980 HUG1YML058W-A 207 nt1.01□□□□□ -2.25
SIT1P39980 YOR192C-BYOR192C-B 5313 nt1.01□□□□□ -2.25
SIT1P39980 SEC10YLR166C 2616 nt0.99□□□□□ -2.25
SIT1P39980 ANS1YHR126C 480 nt0.99□□□□□ -2.25
SIT1P39980 EMT1tM(CAU)D 73 nt0.98□□□□□ -2.25
SIT1P39980 EMT5tM(CAU)J1 73 nt0.98□□□□□ -2.25
SIT1P39980 EMT3tM(CAU)J2 73 nt0.98□□□□□ -2.25
SIT1P39980 EMT4tM(CAU)M 73 nt0.98□□□□□ -2.25
SIT1P39980 EMT2tM(CAU)O2 73 nt0.98□□□□□ -2.25
SIT1P39980 YBR196C-AYBR196C-A 150 nt0.98□□□□□ -2.25
SIT1P39980 tH(GUG)E1tH(GUG)E1 72 nt0.97□□□□□ -2.25
SIT1P39980 tH(GUG)E2tH(GUG)E2 72 nt0.97□□□□□ -2.25
SIT1P39980 tH(GUG)G1tH(GUG)G1 72 nt0.97□□□□□ -2.25
SIT1P39980 tH(GUG)G2tH(GUG)G2 72 nt0.97□□□□□ -2.25
SIT1P39980 tH(GUG)HtH(GUG)H 72 nt0.97□□□□□ -2.25
SIT1P39980 tH(GUG)KtH(GUG)K 72 nt0.97□□□□□ -2.25
SIT1P39980 tH(GUG)MtH(GUG)M 72 nt0.97□□□□□ -2.25
SIT1P39980 SBH1YER087C-B 249 nt0.97□□□□□ -2.25
SIT1P39980 NIP1YMR309C 2439 nt0.96□□□□□ -2.26
SIT1P39980 PET111YMR257C 2403 nt0.93□□□□□ -2.26
SIT1P39980 snR81snR81 201 nt0.93□□□□□ -2.26
SIT1P39980 EST1YLR233C 2100 nt0.92□□□□□ -2.26
SIT1P39980 YAL037C-AYAL037C-A 93 nt0.91□□□□□ -2.26
SIT1P39980 tV(UAC)BtV(UAC)B 74 nt0.9□□□□□ -2.27
Retrieved 100 of 7,029 protein–RNA pairs in 130.7 ms