Protein–RNA interactions for Protein: P39543

SOP4, Protein SOP4, yeastyeast

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SOP4P39543 YHR175W-AYHR175W-A 150 nt0.29□□□□□ -2.36
SOP4P39543 YKL100W-AYKL100W-A 90 nt0.29□□□□□ -2.36
SOP4P39543 YKL118WYKL118W 312 nt0.29□□□□□ -2.36
SOP4P39543 YOR072W-BYOR072W-B 162 nt0.29□□□□□ -2.36
SOP4P39543 YOL014WYOL014W 375 nt0.28□□□□□ -2.36
SOP4P39543 BIR1YJR089W 2865 nt0.27□□□□□ -2.37
SOP4P39543 TRS65YGR166W 1683 nt0.27□□□□□ -2.37
SOP4P39543 YDR371C-AYDR371C-A 105 nt0.27□□□□□ -2.37
SOP4P39543 QCR9YGR183C 201 nt0.27□□□□□ -2.37
SOP4P39543 YOR015WYOR015W 360 nt0.27□□□□□ -2.37
SOP4P39543 YNL054W-BYNL054W-B 5250 nt0.27□□□□□ -2.37
SOP4P39543 YER097WYER097W 330 nt0.26□□□□□ -2.37
SOP4P39543 RPS26AYGL189C 360 nt0.26□□□□□ -2.37
SOP4P39543 YGR069WYGR069W 336 nt0.26□□□□□ -2.37
SOP4P39543 RPL39YJL189W 156 nt0.26□□□□□ -2.37
SOP4P39543 YLR120W-AYLR120W-A 102 nt0.26□□□□□ -2.37
SOP4P39543 IQG1YPL242C 4488 nt0.26□□□□□ -2.37
SOP4P39543 ORC3YLL004W 1851 nt0.26□□□□□ -2.37
SOP4P39543 snR56snR56 88 nt0.25□□□□□ -2.37
SOP4P39543 HMRA1YCR097W 381 nt0.25□□□□□ -2.37
SOP4P39543 STE5YDR103W 2754 nt0.25□□□□□ -2.37
SOP4P39543 YLR041WYLR041W 321 nt0.24□□□□□ -2.37
SOP4P39543 RAD61YDR014W 1944 nt0.24□□□□□ -2.37
SOP4P39543 YHR131W-AYHR131W-A 246 nt0.23□□□□□ -2.37
SOP4P39543 YNL146WYNL146W 303 nt0.23□□□□□ -2.37
SOP4P39543 NIP1YMR309C 2439 nt0.23□□□□□ -2.37
SOP4P39543 YLL006W-AYLL006W-A 177 nt0.22□□□□□ -2.37
SOP4P39543 YDR366CYDR366C 399 nt0.21□□□□□ -2.38
SOP4P39543 SNU13YEL026W 381 nt0.21□□□□□ -2.38
SOP4P39543 tR(ACG)Q2tR(ACG)Q2 74 nt0.21□□□□□ -2.38
SOP4P39543 ESP1YGR098C 4893 nt0.21□□□□□ -2.38
SOP4P39543 YER053C-AYER053C-A 114 nt0.19□□□□□ -2.38
SOP4P39543 YGL052WYGL052W 306 nt0.19□□□□□ -2.38
SOP4P39543 COX12YLR038C 252 nt0.19□□□□□ -2.38
SOP4P39543 YMR172C-AYMR172C-A 384 nt0.19□□□□□ -2.38
SOP4P39543 YOL013W-AYOL013W-A 192 nt0.19□□□□□ -2.38
SOP4P39543 RCO1YMR075W 2055 nt0.18□□□□□ -2.38
SOP4P39543 snR74snR74 88 nt0.18□□□□□ -2.38
SOP4P39543 MLP2YIL149C 5040 nt0.18□□□□□ -2.38
SOP4P39543 YOR008C-AYOR008C-A 225 nt0.16□□□□□ -2.38
SOP4P39543 THO2YNL139C 4794 nt0.16□□□□□ -2.38
SOP4P39543 BUL2YML111W 2763 nt0.14□□□□□ -2.39
SOP4P39543 YOR186C-AYOR186C-A 210 nt0.14□□□□□ -2.39
SOP4P39543 YCR038W-AYCR038W-A 126 nt0.13□□□□□ -2.39
SOP4P39543 YIL002W-AYIL002W-A 210 nt0.13□□□□□ -2.39
SOP4P39543 YBR072C-AYBR072C-A 162 nt0.13□□□□□ -2.39
SOP4P39543 YNL277W-AYNL277W-A 189 nt0.11□□□□□ -2.39
SOP4P39543 YKU70YMR284W 1809 nt0.1□□□□□ -2.39
SOP4P39543 UTP8YGR128C 2142 nt0.1□□□□□ -2.39
SOP4P39543 YER078W-AYER078W-A 165 nt0.09□□□□□ -2.4
SOP4P39543 YBL100W-BYBL100W-B 5313 nt0.09□□□□□ -2.4
SOP4P39543 MYO1YHR023W 5787 nt0.08□□□□□ -2.4
SOP4P39543 YEL073CYEL073C 324 nt0.08□□□□□ -2.4
SOP4P39543 YLR232WYLR232W 348 nt0.08□□□□□ -2.4
SOP4P39543 YIR030W-AYIR030W-A 384 nt0.06□□□□□ -2.4
SOP4P39543 YMR158W-BYMR158W-B 321 nt0.05□□□□□ -2.4
SOP4P39543 APQ12YIL040W 417 nt0.04□□□□□ -2.4
SOP4P39543 YDR524W-CYDR524W-C 90 nt0.03□□□□□ -2.4
SOP4P39543 YBR182C-AYBR182C-A 195 nt0.03□□□□□ -2.4
SOP4P39543 GLG1YKR058W 1851 nt0.03□□□□□ -2.41
SOP4P39543 CSE1YGL238W 2883 nt0.03□□□□□ -2.41
SOP4P39543 TAH1YCR060W 336 nt0.01□□□□□ -2.41
SOP4P39543 SDH6YDR379C-A 240 nt0.01□□□□□ -2.41
SOP4P39543 YPR010C-AYPR010C-A 219 nt0.01□□□□□ -2.41
SOP4P39543 snR65snR65 100 nt0□□□□□ -2.41
SOP4P39543 tF(GAA)QtF(GAA)Q 75 nt-0.01□□□□□ -2.41
SOP4P39543 YDR544CYDR544C 429 nt-0.02□□□□□ -2.41
SOP4P39543 SOV1YMR066W 2697 nt-0.03□□□□□ -2.41
SOP4P39543 snR55snR55 98 nt-0.04□□□□□ -2.42
SOP4P39543 YGL041CYGL041C 204 nt-0.05□□□□□ -2.42
SOP4P39543 YBR099CYBR099C 384 nt-0.05□□□□□ -2.42
SOP4P39543 snR49snR49 165 nt-0.05□□□□□ -2.42
SOP4P39543 YML099W-AYML099W-A 330 nt-0.06□□□□□ -2.42
SOP4P39543 PRP39YML046W 1890 nt-0.07□□□□□ -2.42
SOP4P39543 YER181CYER181C 324 nt-0.07□□□□□ -2.42
SOP4P39543 snR45snR45 172 nt-0.07□□□□□ -2.42
SOP4P39543 COG6YNL041C 2520 nt-0.08□□□□□ -2.42
SOP4P39543 YBL039C-AYBL039C-A 84 nt-0.08□□□□□ -2.42
SOP4P39543 YPL152W-AYPL152W-A 99 nt-0.1□□□□□ -2.43
SOP4P39543 snR128snR128 126 nt-0.11□□□□□ -2.43
SOP4P39543 YBR131C-AYBR131C-A 90 nt-0.11□□□□□ -2.43
SOP4P39543 EST1YLR233C 2100 nt-0.12□□□□□ -2.43
SOP4P39543 YOL155W-AYOL155W-A 135 nt-0.12□□□□□ -2.43
SOP4P39543 YGL182CYGL182C 324 nt-0.14□□□□□ -2.43
SOP4P39543 snR8snR8 190 nt-0.16□□□□□ -2.44
SOP4P39543 YEL014CYEL014C 306 nt-0.16□□□□□ -2.44
SOP4P39543 YOR314W-AYOR314W-A 111 nt-0.16□□□□□ -2.44
SOP4P39543 YOR231C-AYOR231C-A 201 nt-0.17□□□□□ -2.44
SOP4P39543 YJL182CYJL182C 318 nt-0.18□□□□□ -2.44
SOP4P39543 YGL188C-AYGL188C-A 141 nt-0.22□□□□□ -2.44
SOP4P39543 YNL097C-BYNL097C-B 123 nt-0.23□□□□□ -2.45
SOP4P39543 RPM2YML091C 3609 nt-0.24□□□□□ -2.45
SOP4P39543 YOR302WYOR302W 78 nt-0.24□□□□□ -2.45
SOP4P39543 YOR381W-AYOR381W-A 168 nt-0.24□□□□□ -2.45
SOP4P39543 YDR210WYDR210W 228 nt-0.26□□□□□ -2.45
SOP4P39543 TFB5YDR079C-A 219 nt-0.28□□□□□ -2.45
SOP4P39543 YOR170WYOR170W 306 nt-0.29□□□□□ -2.46
SOP4P39543 tM(CAU)Q2tM(CAU)Q2 78 nt-0.3□□□□□ -2.46
SOP4P39543 SBH2YER019C-A 267 nt-0.31□□□□□ -2.46
SOP4P39543 YGR164WYGR164W 336 nt-0.31□□□□□ -2.46
Retrieved 100 of 7,029 protein–RNA pairs in 147.9 ms