Protein–RNA interactions for Protein: P39111

VMA7, V-type proton ATPase subunit F, yeastyeast

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VMA7P39111 YIL002W-AYIL002W-A 210 nt-1.63□□□□□ -2.67
VMA7P39111 YER084W-AYER084W-A 513 nt-1.66□□□□□ -2.68
VMA7P39111 PRM3YPL192C 402 nt-1.66□□□□□ -2.68
VMA7P39111 YER053C-AYER053C-A 114 nt-1.72□□□□□ -2.68
VMA7P39111 YMR193C-AYMR193C-A 387 nt-1.72□□□□□ -2.68
VMA7P39111 VPS20YMR077C 666 nt-1.73□□□□□ -2.69
VMA7P39111 RPS27BYHR021C 249 nt-1.76□□□□□ -2.69
VMA7P39111 YNR077CYNR077C 255 nt-1.76□□□□□ -2.69
VMA7P39111 snR49snR49 165 nt-1.76□□□□□ -2.69
VMA7P39111 MPC1YGL080W 393 nt-1.78□□□□□ -2.69
VMA7P39111 APQ12YIL040W 417 nt-1.78□□□□□ -2.69
VMA7P39111 YGR069WYGR069W 336 nt-1.79□□□□□ -2.7
VMA7P39111 YJL047C-AYJL047C-A 135 nt-1.79□□□□□ -2.7
VMA7P39111 YGL052WYGL052W 306 nt-1.8□□□□□ -2.7
VMA7P39111 CSE2YNR010W 450 nt-1.81□□□□□ -2.7
VMA7P39111 YLR154W-FYLR154W-F 141 nt-1.82□□□□□ -2.7
VMA7P39111 YGL182CYGL182C 324 nt-1.83□□□□□ -2.7
VMA7P39111 EAF6YJR082C 342 nt-1.84□□□□□ -2.7
VMA7P39111 YOR170WYOR170W 306 nt-1.84□□□□□ -2.7
VMA7P39111 CSN9YDR179C 489 nt-1.85□□□□□ -2.71
VMA7P39111 TOM22YNL131W 459 nt-1.86□□□□□ -2.71
VMA7P39111 YOR015WYOR015W 360 nt-1.86□□□□□ -2.71
VMA7P39111 YPR010C-AYPR010C-A 219 nt-1.86□□□□□ -2.71
VMA7P39111 snR54snR54 86 nt-1.86□□□□□ -2.71
VMA7P39111 YJL197C-AYJL197C-A 282 nt-1.87□□□□□ -2.71
VMA7P39111 YLL019W-AYLL019W-A 93 nt-1.87□□□□□ -2.71
VMA7P39111 YDR544CYDR544C 429 nt-1.88□□□□□ -2.71
VMA7P39111 YIL115W-AYIL115W-A 372 nt-1.9□□□□□ -2.71
VMA7P39111 tP(UGG)QtP(UGG)Q 72 nt-1.91□□□□□ -2.72
VMA7P39111 Q0255Q0255 1419 nt-1.92□□□□□ -2.72
VMA7P39111 YJL077W-AYJL077W-A 87 nt-1.94□□□□□ -2.72
VMA7P39111 BI2Q0110 1272 nt-1.95□□□□□ -2.72
VMA7P39111 YAF9YNL107W 681 nt-1.98□□□□□ -2.73
VMA7P39111 HMRA1YCR097W 381 nt-2□□□□□ -2.73
VMA7P39111 YER006C-AYER006C-A 318 nt-2□□□□□ -2.73
VMA7P39111 YLR285C-AYLR285C-A 171 nt-2□□□□□ -2.73
VMA7P39111 tQ(UUG)QtQ(UUG)Q 76 nt-2.03□□□□□ -2.73
VMA7P39111 YPR016W-AYPR016W-A 261 nt-2.07□□□□□ -2.74
VMA7P39111 YML099W-AYML099W-A 330 nt-2.08□□□□□ -2.74
VMA7P39111 YOR314W-AYOR314W-A 111 nt-2.09□□□□□ -2.74
VMA7P39111 YIL032CYIL032C 357 nt-2.1□□□□□ -2.75
VMA7P39111 YER137W-AYER137W-A 306 nt-2.11□□□□□ -2.75
VMA7P39111 YGL149WYGL149W 306 nt-2.11□□□□□ -2.75
VMA7P39111 JLP2YMR132C 627 nt-2.11□□□□□ -2.75
VMA7P39111 YOR072W-BYOR072W-B 162 nt-2.11□□□□□ -2.75
VMA7P39111 snR74snR74 88 nt-2.12□□□□□ -2.75
VMA7P39111 YKL123WYKL123W 381 nt-2.14□□□□□ -2.75
VMA7P39111 STE18YJR086W 333 nt-2.15□□□□□ -2.75
VMA7P39111 YER090C-AYER090C-A 90 nt-2.16□□□□□ -2.76
VMA7P39111 snR189snR189 189 nt-2.16□□□□□ -2.76
VMA7P39111 YLR434CYLR434C 384 nt-2.18□□□□□ -2.76
VMA7P39111 YNL266WYNL266W 420 nt-2.18□□□□□ -2.76
VMA7P39111 snR41snR41 95 nt-2.18□□□□□ -2.76
VMA7P39111 snR69snR69 101 nt-2.2□□□□□ -2.76
VMA7P39111 YDR048CYDR048C 315 nt-2.2□□□□□ -2.76
VMA7P39111 YBL039C-AYBL039C-A 84 nt-2.2□□□□□ -2.76
VMA7P39111 SKI7YOR076C 2244 nt-2.22□□□□□ -2.76
VMA7P39111 YNL122CYNL122C 348 nt-2.22□□□□□ -2.76
VMA7P39111 snR50snR50 90 nt-2.23□□□□□ -2.77
VMA7P39111 YOR121CYOR121C 306 nt-2.24□□□□□ -2.77
VMA7P39111 YDL158CYDL158C 309 nt-2.26□□□□□ -2.77
VMA7P39111 YBR285WYBR285W 435 nt-2.26□□□□□ -2.77
VMA7P39111 snR60snR60 104 nt-2.29□□□□□ -2.78
VMA7P39111 YDR102CYDR102C 333 nt-2.32□□□□□ -2.78
VMA7P39111 tY(GUA)QtY(GUA)Q 84 nt-2.32□□□□□ -2.78
VMA7P39111 RDS3YPR094W 324 nt-2.36□□□□□ -2.79
VMA7P39111 tW(UCA)QtW(UCA)Q 74 nt-2.39□□□□□ -2.79
VMA7P39111 YMR001C-AYMR001C-A 231 nt-2.41□□□□□ -2.8
VMA7P39111 snR67snR67 82 nt-2.44□□□□□ -2.8
VMA7P39111 YLR406C-AYLR406C-A 150 nt-2.46□□□□□ -2.8
VMA7P39111 YNL028WYNL028W 318 nt-2.46□□□□□ -2.8
VMA7P39111 CDC65tQ(CUG)M 72 nt-2.49□□□□□ -2.81
VMA7P39111 YNL324WYNL324W 396 nt-2.49□□□□□ -2.81
VMA7P39111 PMP2YEL017C-A 132 nt-2.5□□□□□ -2.81
VMA7P39111 YER097WYER097W 330 nt-2.5□□□□□ -2.81
VMA7P39111 YFL032WYFL032W 321 nt-2.5□□□□□ -2.81
VMA7P39111 YGR240C-AYGR240C-A 201 nt-2.55□□□□□ -2.82
VMA7P39111 YML054C-AYML054C-A 159 nt-2.56□□□□□ -2.82
VMA7P39111 YLR120W-AYLR120W-A 102 nt-2.57□□□□□ -2.82
VMA7P39111 BIL1YOR304C-A 231 nt-2.57□□□□□ -2.82
VMA7P39111 YOL013W-BYOL013W-B 291 nt-2.58□□□□□ -2.82
VMA7P39111 HTL1YCR020W-B 237 nt-2.59□□□□□ -2.82
VMA7P39111 ATP6Q0085 780 nt-2.59□□□□□ -2.82
VMA7P39111 tM(CAU)Q2tM(CAU)Q2 78 nt-2.6□□□□□ -2.83
VMA7P39111 YNL205CYNL205C 423 nt-2.61□□□□□ -2.83
VMA7P39111 YGR146C-AYGR146C-A 162 nt-2.62□□□□□ -2.83
VMA7P39111 YLR202CYLR202C 327 nt-2.62□□□□□ -2.83
VMA7P39111 YNR025CYNR025C 360 nt-2.62□□□□□ -2.83
VMA7P39111 snR77snR77 88 nt-2.64□□□□□ -2.83
VMA7P39111 YOR008C-AYOR008C-A 225 nt-2.66□□□□□ -2.84
VMA7P39111 YFL019CYFL019C 354 nt-2.7□□□□□ -2.84
VMA7P39111 snR39BsnR39B 96 nt-2.7□□□□□ -2.84
VMA7P39111 snR81snR81 201 nt-2.71□□□□□ -2.84
VMA7P39111 tD(GUC)QtD(GUC)Q 75 nt-2.71□□□□□ -2.84
VMA7P39111 YGL041CYGL041C 204 nt-2.71□□□□□ -2.84
VMA7P39111 YLR286W-AYLR286W-A 135 nt-2.71□□□□□ -2.84
VMA7P39111 YOR381W-AYOR381W-A 168 nt-2.72□□□□□ -2.84
VMA7P39111 YKL063CYKL063C 504 nt-2.74□□□□□ -2.85
VMA7P39111 YBR126W-BYBR126W-B 144 nt-2.75□□□□□ -2.85
VMA7P39111 ATP19YOL077W-A 207 nt-2.76□□□□□ -2.85
Retrieved 100 of 7,029 protein–RNA pairs in 8.6 ms