Protein–RNA interactions for Protein: P39078

CCT4, T-complex protein 1 subunit delta, yeastyeast

Known RBP Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CCT4P39078 KIP1YBL063W 3336 nt1.33□□□□□ -2.2
CCT4P39078 STF2YGR008C 255 nt1.33□□□□□ -2.2
CCT4P39078 EMC5YIL027C 426 nt1.33□□□□□ -2.2
CCT4P39078 ADR1YDR216W 3972 nt1.32□□□□□ -2.2
CCT4P39078 YLL020CYLL020C 306 nt1.32□□□□□ -2.2
CCT4P39078 SMC4YLR086W 4257 nt1.32□□□□□ -2.2
CCT4P39078 YDR210WYDR210W 228 nt1.31□□□□□ -2.2
CCT4P39078 RAD50YNL250W 3939 nt1.31□□□□□ -2.2
CCT4P39078 tH(GUG)E1tH(GUG)E1 72 nt1.3□□□□□ -2.2
CCT4P39078 tH(GUG)E2tH(GUG)E2 72 nt1.3□□□□□ -2.2
CCT4P39078 tH(GUG)G1tH(GUG)G1 72 nt1.3□□□□□ -2.2
CCT4P39078 tH(GUG)G2tH(GUG)G2 72 nt1.3□□□□□ -2.2
CCT4P39078 tH(GUG)HtH(GUG)H 72 nt1.3□□□□□ -2.2
CCT4P39078 tH(GUG)KtH(GUG)K 72 nt1.3□□□□□ -2.2
CCT4P39078 tH(GUG)MtH(GUG)M 72 nt1.3□□□□□ -2.2
CCT4P39078 MSH3YCR092C 3057 nt1.3□□□□□ -2.2
CCT4P39078 REV3YPL167C 4515 nt1.29□□□□□ -2.2
CCT4P39078 tM(CAU)Q2tM(CAU)Q2 78 nt1.29□□□□□ -2.2
CCT4P39078 KAP122YGL016W 3246 nt1.28□□□□□ -2.21
CCT4P39078 GEA2YEL022W 4380 nt1.28□□□□□ -2.21
CCT4P39078 COX5BYIL111W 456 nt1.27□□□□□ -2.21
CCT4P39078 YOL083C-AYOL083C-A 141 nt1.27□□□□□ -2.21
CCT4P39078 KAP120YPL125W 3099 nt1.27□□□□□ -2.21
CCT4P39078 YAR009CYAR009C 3591 nt1.26□□□□□ -2.21
CCT4P39078 SLX4YLR135W 2247 nt1.25□□□□□ -2.21
CCT4P39078 EST2YLR318W 2655 nt1.25□□□□□ -2.21
CCT4P39078 NUT1YGL151W 3399 nt1.25□□□□□ -2.21
CCT4P39078 TRM732YMR259C 4263 nt1.25□□□□□ -2.21
CCT4P39078 RAD9YDR217C 3930 nt1.24□□□□□ -2.21
CCT4P39078 YJL127W-AYJL127W-A 117 nt1.24□□□□□ -2.21
CCT4P39078 YAL037C-AYAL037C-A 93 nt1.24□□□□□ -2.21
CCT4P39078 YLR232WYLR232W 348 nt1.24□□□□□ -2.21
CCT4P39078 YNL266WYNL266W 420 nt1.24□□□□□ -2.21
CCT4P39078 YBR072C-AYBR072C-A 162 nt1.24□□□□□ -2.21
CCT4P39078 AZF1YOR113W 2745 nt1.24□□□□□ -2.21
CCT4P39078 FYV10YIL097W 1551 nt1.24□□□□□ -2.21
CCT4P39078 RSM22YKL155C 1887 nt1.24□□□□□ -2.21
CCT4P39078 YBL071C-BYBL071C-B 99 nt1.23□□□□□ -2.21
CCT4P39078 BIR1YJR089W 2865 nt1.22□□□□□ -2.21
CCT4P39078 SMC1YFL008W 3678 nt1.22□□□□□ -2.21
CCT4P39078 YML002WYML002W 2214 nt1.22□□□□□ -2.21
CCT4P39078 ASE1YOR058C 2658 nt1.22□□□□□ -2.21
CCT4P39078 snR62snR62 100 nt1.22□□□□□ -2.21
CCT4P39078 SEC1YDR164C 2175 nt1.21□□□□□ -2.22
CCT4P39078 BUD3YCL014W 4911 nt1.21□□□□□ -2.22
CCT4P39078 YNL284C-BYNL284C-B 5268 nt1.2□□□□□ -2.22
CCT4P39078 YKL100W-AYKL100W-A 90 nt1.19□□□□□ -2.22
CCT4P39078 YLR041WYLR041W 321 nt1.19□□□□□ -2.22
CCT4P39078 STO1YMR125W 2586 nt1.19□□□□□ -2.22
CCT4P39078 ALY2YJL084C 3141 nt1.19□□□□□ -2.22
CCT4P39078 MMS4YBR098W 2076 nt1.19□□□□□ -2.22
CCT4P39078 snR190snR190 190 nt1.18□□□□□ -2.22
CCT4P39078 NOP9YJL010C 2001 nt1.18□□□□□ -2.22
CCT4P39078 SET3YKR029C 2256 nt1.18□□□□□ -2.22
CCT4P39078 VAM6YDL077C 3150 nt1.17□□□□□ -2.22
CCT4P39078 SPT7YBR081C 3999 nt1.17□□□□□ -2.22
CCT4P39078 RPL26BYGR034W 384 nt1.17□□□□□ -2.22
CCT4P39078 ANS1YHR126C 480 nt1.17□□□□□ -2.22
CCT4P39078 MSN5YDR335W 3675 nt1.17□□□□□ -2.22
CCT4P39078 NUP188YML103C 4968 nt1.16□□□□□ -2.22
CCT4P39078 PAN2YGL094C 3348 nt1.15□□□□□ -2.23
CCT4P39078 YDR034C-AYDR034C-A 177 nt1.15□□□□□ -2.23
CCT4P39078 BEM2YER155C 6504 nt1.14□□□□□ -2.23
CCT4P39078 RPS26AYGL189C 360 nt1.14□□□□□ -2.23
CCT4P39078 SWI4YER111C 3282 nt1.14□□□□□ -2.23
CCT4P39078 SIP4YJL089W 2490 nt1.13□□□□□ -2.23
CCT4P39078 WAR1YML076C 2835 nt1.13□□□□□ -2.23
CCT4P39078 YGR146C-AYGR146C-A 162 nt1.13□□□□□ -2.23
CCT4P39078 SEC3YER008C 4011 nt1.12□□□□□ -2.23
CCT4P39078 YCS4YLR272C 3531 nt1.11□□□□□ -2.23
CCT4P39078 tN(GUU)QtN(GUU)Q 71 nt1.11□□□□□ -2.23
CCT4P39078 NNF2YGR089W 2811 nt1.11□□□□□ -2.23
CCT4P39078 YOL164W-AYOL164W-A 183 nt1.1□□□□□ -2.23
CCT4P39078 YBR196C-AYBR196C-A 150 nt1.1□□□□□ -2.23
CCT4P39078 ORC3YLL004W 1851 nt1.09□□□□□ -2.23
CCT4P39078 CDC39YCR093W 6327 nt1.09□□□□□ -2.23
CCT4P39078 tV(UAC)BtV(UAC)B 74 nt1.09□□□□□ -2.23
CCT4P39078 tV(UAC)DtV(UAC)D 74 nt1.09□□□□□ -2.23
CCT4P39078 YDL073WYDL073W 2955 nt1.09□□□□□ -2.24
CCT4P39078 NUP145YGL092W 3954 nt1.09□□□□□ -2.24
CCT4P39078 APL3YBL037W 3078 nt1.09□□□□□ -2.24
CCT4P39078 SCC2YDR180W 4482 nt1.08□□□□□ -2.24
CCT4P39078 YGR240C-AYGR240C-A 201 nt1.08□□□□□ -2.24
CCT4P39078 UBP3YER151C 2739 nt1.07□□□□□ -2.24
CCT4P39078 IML1YJR138W 4755 nt1.07□□□□□ -2.24
CCT4P39078 snR47snR47 99 nt1.07□□□□□ -2.24
CCT4P39078 DOP1YDR141C 5097 nt1.06□□□□□ -2.24
CCT4P39078 GLG1YKR058W 1851 nt1.05□□□□□ -2.24
CCT4P39078 YLR286W-AYLR286W-A 135 nt1.05□□□□□ -2.24
CCT4P39078 YBR200W-AYBR200W-A 165 nt1.04□□□□□ -2.24
CCT4P39078 SEC10YLR166C 2616 nt1.04□□□□□ -2.24
CCT4P39078 YJR029WYJR029W 5268 nt1.04□□□□□ -2.24
CCT4P39078 YPR137C-BYPR137C-B 5268 nt1.04□□□□□ -2.24
CCT4P39078 ROM2YLR371W 4071 nt1.04□□□□□ -2.24
CCT4P39078 YGR130CYGR130C 2451 nt1.03□□□□□ -2.25
CCT4P39078 CLU1YMR012W 3834 nt1.02□□□□□ -2.25
CCT4P39078 PRP16YKR086W 3216 nt1.02□□□□□ -2.25
CCT4P39078 YBL100W-CYBL100W-C 120 nt1.01□□□□□ -2.25
CCT4P39078 YPR160W-AYPR160W-A 81 nt1.01□□□□□ -2.25
CCT4P39078 BEM3YPL115C 3387 nt1□□□□□ -2.25
Retrieved 100 of 7,029 protein–RNA pairs in 26.8 ms