Protein–RNA interactions for Protein: P10622

RPP1B, 60S acidic ribosomal protein P1-beta, yeastyeast

Known RBP Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPP1BP10622 USO1YDL058W 5373 nt2.37□□□□□ -2.03
RPP1BP10622 STO1YMR125W 2586 nt2.37□□□□□ -2.03
RPP1BP10622 YOR055WYOR055W 435 nt2.37□□□□□ -2.03
RPP1BP10622 VPS13YLL040C 9435 nt2.36□□□□□ -2.03
RPP1BP10622 DNA2YHR164C 4569 nt2.36□□□□□ -2.03
RPP1BP10622 PDR11YIL013C 4236 nt2.36□□□□□ -2.03
RPP1BP10622 SPF1YEL031W 3648 nt2.36□□□□□ -2.03
RPP1BP10622 YLR299C-AYLR299C-A 93 nt2.35□□□□□ -2.03
RPP1BP10622 IRA2YOL081W 9240 nt2.35□□□□□ -2.03
RPP1BP10622 ANS1YHR126C 480 nt2.34□□□□□ -2.03
RPP1BP10622 tW(CCA)G1tW(CCA)G1 72 nt2.34□□□□□ -2.03
RPP1BP10622 tW(CCA)G2tW(CCA)G2 72 nt2.34□□□□□ -2.03
RPP1BP10622 tW(CCA)JtW(CCA)J 72 nt2.34□□□□□ -2.03
RPP1BP10622 tW(CCA)KtW(CCA)K 72 nt2.34□□□□□ -2.03
RPP1BP10622 tW(CCA)MtW(CCA)M 72 nt2.34□□□□□ -2.03
RPP1BP10622 tW(CCA)PtW(CCA)P 72 nt2.34□□□□□ -2.03
RPP1BP10622 snR38snR38 95 nt2.34□□□□□ -2.03
RPP1BP10622 SMC4YLR086W 4257 nt2.34□□□□□ -2.04
RPP1BP10622 IRC20YLR247C 4671 nt2.33□□□□□ -2.04
RPP1BP10622 MYO4YAL029C 4416 nt2.33□□□□□ -2.04
RPP1BP10622 AI1Q0050 2505 nt2.33□□□□□ -2.04
RPP1BP10622 SKI3YPR189W 4299 nt2.32□□□□□ -2.04
RPP1BP10622 tC(GCA)BtC(GCA)B 72 nt2.32□□□□□ -2.04
RPP1BP10622 tC(GCA)GtC(GCA)G 72 nt2.32□□□□□ -2.04
RPP1BP10622 tC(GCA)P1tC(GCA)P1 72 nt2.32□□□□□ -2.04
RPP1BP10622 tC(GCA)P2tC(GCA)P2 72 nt2.32□□□□□ -2.04
RPP1BP10622 tN(GUU)QtN(GUU)Q 71 nt2.32□□□□□ -2.04
RPP1BP10622 YPR160W-AYPR160W-A 81 nt2.32□□□□□ -2.04
RPP1BP10622 PET127YOR017W 2403 nt2.32□□□□□ -2.04
RPP1BP10622 EST1YLR233C 2100 nt2.32□□□□□ -2.04
RPP1BP10622 NST1YNL091W 3723 nt2.31□□□□□ -2.04
RPP1BP10622 SEC16YPL085W 6588 nt2.31□□□□□ -2.04
RPP1BP10622 SCD5YOR329C 2619 nt2.31□□□□□ -2.04
RPP1BP10622 YOL019W-AYOL019W-A 153 nt2.29□□□□□ -2.04
RPP1BP10622 ULP2YIL031W 3105 nt2.28□□□□□ -2.04
RPP1BP10622 YMR045CYMR045C 5268 nt2.27□□□□□ -2.05
RPP1BP10622 SLN1YIL147C 3663 nt2.27□□□□□ -2.05
RPP1BP10622 GEA2YEL022W 4380 nt2.26□□□□□ -2.05
RPP1BP10622 BRE1YDL074C 2103 nt2.26□□□□□ -2.05
RPP1BP10622 SGS1YMR190C 4344 nt2.26□□□□□ -2.05
RPP1BP10622 MON2YNL297C 4911 nt2.26□□□□□ -2.05
RPP1BP10622 YDL159C-BYDL159C-B 177 nt2.25□□□□□ -2.05
RPP1BP10622 PRP16YKR086W 3216 nt2.25□□□□□ -2.05
RPP1BP10622 MSB1YOR188W 3414 nt2.24□□□□□ -2.05
RPP1BP10622 snR70snR70 164 nt2.24□□□□□ -2.05
RPP1BP10622 PSD2YGR170W 3417 nt2.24□□□□□ -2.05
RPP1BP10622 ATG9YDL149W 2994 nt2.24□□□□□ -2.05
RPP1BP10622 APL3YBL037W 3078 nt2.23□□□□□ -2.05
RPP1BP10622 snR69snR69 101 nt2.23□□□□□ -2.05
RPP1BP10622 YML054C-AYML054C-A 159 nt2.23□□□□□ -2.05
RPP1BP10622 HER1YOR227W 3741 nt2.22□□□□□ -2.05
RPP1BP10622 SEC8YPR055W 3198 nt2.22□□□□□ -2.05
RPP1BP10622 MSN5YDR335W 3675 nt2.22□□□□□ -2.05
RPP1BP10622 NUP170YBL079W 4509 nt2.21□□□□□ -2.06
RPP1BP10622 YOL098CYOL098C 3114 nt2.2□□□□□ -2.06
RPP1BP10622 BNI1YNL271C 5862 nt2.2□□□□□ -2.06
RPP1BP10622 NIP1YMR309C 2439 nt2.2□□□□□ -2.06
RPP1BP10622 RPL41AYDL184C 78 nt2.19□□□□□ -2.06
RPP1BP10622 CDC25YLR310C 4770 nt2.18□□□□□ -2.06
RPP1BP10622 BEM3YPL115C 3387 nt2.18□□□□□ -2.06
RPP1BP10622 YSP1YHR155W 3687 nt2.16□□□□□ -2.06
RPP1BP10622 SWI4YER111C 3282 nt2.16□□□□□ -2.06
RPP1BP10622 YLR399W-AYLR399W-A 105 nt2.16□□□□□ -2.06
RPP1BP10622 YBR296C-AYBR296C-A 120 nt2.16□□□□□ -2.06
RPP1BP10622 CSE1YGL238W 2883 nt2.16□□□□□ -2.06
RPP1BP10622 PMD1YER132C 5262 nt2.15□□□□□ -2.06
RPP1BP10622 YHR180C-BYHR180C-B 105 nt2.15□□□□□ -2.07
RPP1BP10622 SKI7YOR076C 2244 nt2.15□□□□□ -2.07
RPP1BP10622 YGR122C-AYGR122C-A 129 nt2.13□□□□□ -2.07
RPP1BP10622 UTP22YGR090W 3714 nt2.13□□□□□ -2.07
RPP1BP10622 CDC39YCR093W 6327 nt2.13□□□□□ -2.07
RPP1BP10622 TOR2YKL203C 7425 nt2.12□□□□□ -2.07
RPP1BP10622 RDS3YPR094W 324 nt2.12□□□□□ -2.07
RPP1BP10622 SEC31YDL195W 3822 nt2.11□□□□□ -2.07
RPP1BP10622 YNL054W-BYNL054W-B 5250 nt2.09□□□□□ -2.07
RPP1BP10622 INO80YGL150C 4470 nt2.08□□□□□ -2.08
RPP1BP10622 FKS1YLR342W 5631 nt2.08□□□□□ -2.08
RPP1BP10622 NUP188YML103C 4968 nt2.07□□□□□ -2.08
RPP1BP10622 PEP1YBL017C 4740 nt2.05□□□□□ -2.08
RPP1BP10622 UBP2YOR124C 3819 nt2.03□□□□□ -2.08
RPP1BP10622 NUP145YGL092W 3954 nt2.03□□□□□ -2.08
RPP1BP10622 DGR1YNL130C-A 147 nt2.03□□□□□ -2.08
RPP1BP10622 SXM1YDR395W 2835 nt2.02□□□□□ -2.09
RPP1BP10622 SPP41YDR464W 4308 nt2.02□□□□□ -2.09
RPP1BP10622 YHR180W-AYHR180W-A 183 nt2□□□□□ -2.09
RPP1BP10622 REV3YPL167C 4515 nt1.98□□□□□ -2.09
RPP1BP10622 PAU12YGR294W 363 nt1.98□□□□□ -2.09
RPP1BP10622 YHR214C-BYHR214C-B 5382 nt1.97□□□□□ -2.09
RPP1BP10622 SPC110YDR356W 2835 nt1.97□□□□□ -2.09
RPP1BP10622 LAA1YJL207C 6045 nt1.97□□□□□ -2.09
RPP1BP10622 MYO1YHR023W 5787 nt1.96□□□□□ -2.1
RPP1BP10622 CFT1YDR301W 4074 nt1.95□□□□□ -2.1
RPP1BP10622 HUG1YML058W-A 207 nt1.95□□□□□ -2.1
RPP1BP10622 BUL2YML111W 2763 nt1.93□□□□□ -2.1
RPP1BP10622 NUP192YJL039C 5052 nt1.91□□□□□ -2.1
RPP1BP10622 EST2YLR318W 2655 nt1.91□□□□□ -2.1
RPP1BP10622 YJL077W-AYJL077W-A 87 nt1.91□□□□□ -2.1
RPP1BP10622 PET111YMR257C 2403 nt1.9□□□□□ -2.11
RPP1BP10622 SIP4YJL089W 2490 nt1.9□□□□□ -2.11
RPP1BP10622 FAB1YFR019W 6837 nt1.89□□□□□ -2.11
Retrieved 100 of 7,029 protein–RNA pairs in 29.6 ms