Protein–RNA interactions for Protein: Q07953

SDO1, Ribosome maturation protein SDO1, yeastyeast

Known RBP Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SDO1Q07953 OST4YDL232W 111 nt0.24□□□□□ -2.37
SDO1Q07953 YAL067W-AYAL067W-A 228 nt0.23□□□□□ -2.37
SDO1Q07953 YMR321CYMR321C 318 nt0.23□□□□□ -2.37
SDO1Q07953 PRP42YDR235W 1635 nt0.23□□□□□ -2.37
SDO1Q07953 YOL014WYOL014W 375 nt0.22□□□□□ -2.37
SDO1Q07953 HAL9YOL089C 3093 nt0.22□□□□□ -2.37
SDO1Q07953 TRS65YGR166W 1683 nt0.21□□□□□ -2.38
SDO1Q07953 STE5YDR103W 2754 nt0.21□□□□□ -2.38
SDO1Q07953 YLR334CYLR334C 381 nt0.21□□□□□ -2.38
SDO1Q07953 YPL225WYPL225W 441 nt0.21□□□□□ -2.38
SDO1Q07953 YBL100W-BYBL100W-B 5313 nt0.21□□□□□ -2.38
SDO1Q07953 YNL054W-BYNL054W-B 5250 nt0.21□□□□□ -2.38
SDO1Q07953 SGF11YPL047W 300 nt0.2□□□□□ -2.38
SDO1Q07953 YOR192C-BYOR192C-B 5313 nt0.19□□□□□ -2.38
SDO1Q07953 TAR1YLR154W-C 375 nt0.19□□□□□ -2.38
SDO1Q07953 RPS25BYLR333C 327 nt0.19□□□□□ -2.38
SDO1Q07953 VPS20YMR077C 666 nt0.19□□□□□ -2.38
SDO1Q07953 MLP2YIL149C 5040 nt0.19□□□□□ -2.38
SDO1Q07953 YLR434CYLR434C 384 nt0.18□□□□□ -2.38
SDO1Q07953 YOL013W-AYOL013W-A 192 nt0.18□□□□□ -2.38
SDO1Q07953 BIR1YJR089W 2865 nt0.18□□□□□ -2.38
SDO1Q07953 IQG1YPL242C 4488 nt0.16□□□□□ -2.38
SDO1Q07953 QCR9YGR183C 201 nt0.16□□□□□ -2.38
SDO1Q07953 YJL007CYJL007C 315 nt0.16□□□□□ -2.38
SDO1Q07953 YJL120WYJL120W 324 nt0.16□□□□□ -2.38
SDO1Q07953 YKL063CYKL063C 504 nt0.16□□□□□ -2.38
SDO1Q07953 snR190snR190 190 nt0.16□□□□□ -2.38
SDO1Q07953 YCR018C-AYCR018C-A 255 nt0.15□□□□□ -2.39
SDO1Q07953 YLR406C-AYLR406C-A 150 nt0.15□□□□□ -2.39
SDO1Q07953 THO2YNL139C 4794 nt0.15□□□□□ -2.39
SDO1Q07953 YMR307C-AYMR307C-A 195 nt0.14□□□□□ -2.39
SDO1Q07953 YDL185C-AYDL185C-A 228 nt0.13□□□□□ -2.39
SDO1Q07953 YHR007C-AYHR007C-A 216 nt0.13□□□□□ -2.39
SDO1Q07953 YHR138CYHR138C 345 nt0.12□□□□□ -2.39
SDO1Q07953 YAR029WYAR029W 225 nt0.12□□□□□ -2.39
SDO1Q07953 YOR345CYOR345C 351 nt0.12□□□□□ -2.39
SDO1Q07953 ESP1YGR098C 4893 nt0.11□□□□□ -2.39
SDO1Q07953 CSN9YDR179C 489 nt0.1□□□□□ -2.39
SDO1Q07953 YDR371C-AYDR371C-A 105 nt0.1□□□□□ -2.39
SDO1Q07953 YLR202CYLR202C 327 nt0.1□□□□□ -2.39
SDO1Q07953 YOR032W-AYOR032W-A 201 nt0.1□□□□□ -2.39
SDO1Q07953 NNF2YGR089W 2811 nt0.09□□□□□ -2.39
SDO1Q07953 ORC3YLL004W 1851 nt0.09□□□□□ -2.4
SDO1Q07953 RPS26AYGL189C 360 nt0.08□□□□□ -2.4
SDO1Q07953 COX12YLR038C 252 nt0.08□□□□□ -2.4
SDO1Q07953 LEE1YPL054W 906 nt0.08□□□□□ -2.4
SDO1Q07953 tN(GUU)QtN(GUU)Q 71 nt0.07□□□□□ -2.4
SDO1Q07953 YPL205CYPL205C 345 nt0.07□□□□□ -2.4
SDO1Q07953 YER078W-AYER078W-A 165 nt0.06□□□□□ -2.4
SDO1Q07953 YNL146WYNL146W 303 nt0.05□□□□□ -2.4
SDO1Q07953 RCO1YMR075W 2055 nt0.05□□□□□ -2.4
SDO1Q07953 YOR186C-AYOR186C-A 210 nt0.04□□□□□ -2.4
SDO1Q07953 YKL136WYKL136W 399 nt0.02□□□□□ -2.41
SDO1Q07953 HTB2YBL002W 396 nt0.02□□□□□ -2.41
SDO1Q07953 NIP1YMR309C 2439 nt0.01□□□□□ -2.41
SDO1Q07953 YBR285WYBR285W 435 nt0.01□□□□□ -2.41
SDO1Q07953 YCR022CYCR022C 345 nt0□□□□□ -2.41
SDO1Q07953 YLR282CYLR282C 342 nt0□□□□□ -2.41
SDO1Q07953 YDR354C-AYDR354C-A 144 nt-0.01□□□□□ -2.41
SDO1Q07953 YER137W-AYER137W-A 306 nt-0.01□□□□□ -2.41
SDO1Q07953 YOR121CYOR121C 306 nt-0.01□□□□□ -2.41
SDO1Q07953 RPL35AYDL191W 363 nt-0.02□□□□□ -2.41
SDO1Q07953 ULI1YFR026C 510 nt-0.02□□□□□ -2.41
SDO1Q07953 YAR053WYAR053W 297 nt-0.02□□□□□ -2.41
SDO1Q07953 PRM3YPL192C 402 nt-0.02□□□□□ -2.41
SDO1Q07953 YPR092WYPR092W 306 nt-0.02□□□□□ -2.41
SDO1Q07953 SSS1YDR086C 243 nt-0.03□□□□□ -2.41
SDO1Q07953 YER079WYER079W 633 nt-0.03□□□□□ -2.41
SDO1Q07953 YNL324WYNL324W 396 nt-0.03□□□□□ -2.41
SDO1Q07953 YHR131W-AYHR131W-A 246 nt-0.04□□□□□ -2.42
SDO1Q07953 YJL026C-AYJL026C-A 222 nt-0.04□□□□□ -2.42
SDO1Q07953 COG8YML071C 1824 nt-0.05□□□□□ -2.42
SDO1Q07953 AGA2YGL032C 264 nt-0.05□□□□□ -2.42
SDO1Q07953 YLL006W-AYLL006W-A 177 nt-0.05□□□□□ -2.42
SDO1Q07953 COY1YKL179C 2040 nt-0.06□□□□□ -2.42
SDO1Q07953 RPS27BYHR021C 249 nt-0.06□□□□□ -2.42
SDO1Q07953 YKU70YMR284W 1809 nt-0.07□□□□□ -2.42
SDO1Q07953 CSE2YNR010W 450 nt-0.07□□□□□ -2.42
SDO1Q07953 snR45snR45 172 nt-0.08□□□□□ -2.42
SDO1Q07953 YEL020C-BYEL020C-B 198 nt-0.09□□□□□ -2.42
SDO1Q07953 YMR001C-AYMR001C-A 231 nt-0.09□□□□□ -2.42
SDO1Q07953 BUL2YML111W 2763 nt-0.09□□□□□ -2.42
SDO1Q07953 tW(UCA)QtW(UCA)Q 74 nt-0.11□□□□□ -2.43
SDO1Q07953 YIL115W-AYIL115W-A 372 nt-0.11□□□□□ -2.43
SDO1Q07953 BLI1YKL061W 342 nt-0.11□□□□□ -2.43
SDO1Q07953 BIL1YOR304C-A 231 nt-0.11□□□□□ -2.43
SDO1Q07953 Q0017Q0017 162 nt-0.11□□□□□ -2.43
SDO1Q07953 YDR048CYDR048C 315 nt-0.12□□□□□ -2.43
SDO1Q07953 YKL100W-AYKL100W-A 90 nt-0.12□□□□□ -2.43
SDO1Q07953 YOR161W-AYOR161W-A 81 nt-0.12□□□□□ -2.43
SDO1Q07953 YGL123C-AYGL123C-A 231 nt-0.13□□□□□ -2.43
SDO1Q07953 YLR264C-AYLR264C-A 117 nt-0.13□□□□□ -2.43
SDO1Q07953 YLR232WYLR232W 348 nt-0.14□□□□□ -2.43
SDO1Q07953 SNU13YEL026W 381 nt-0.15□□□□□ -2.43
SDO1Q07953 YEL073CYEL073C 324 nt-0.16□□□□□ -2.44
SDO1Q07953 YJR157WYJR157W 363 nt-0.16□□□□□ -2.44
SDO1Q07953 YLR041WYLR041W 321 nt-0.16□□□□□ -2.44
SDO1Q07953 YAL068W-AYAL068W-A 255 nt-0.17□□□□□ -2.44
SDO1Q07953 PRP39YML046W 1890 nt-0.17□□□□□ -2.44
SDO1Q07953 SOV1YMR066W 2697 nt-0.18□□□□□ -2.44
Retrieved 100 of 7,029 protein–RNA pairs in 34.5 ms