Protein–RNA interactions for Protein: Q06147

LCB5, Sphingoid long chain base kinase 5, yeastyeast

Known RBP Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LCB5Q06147 UFD2YDL190C 2886 nt2.68□□□□□ -1.98
LCB5Q06147 FAR11YNL127W 2862 nt2.68□□□□□ -1.98
LCB5Q06147 PKH2YOL100W 3246 nt2.67□□□□□ -1.98
LCB5Q06147 YLR041WYLR041W 321 nt2.67□□□□□ -1.98
LCB5Q06147 RPS29AYLR388W 171 nt2.67□□□□□ -1.98
LCB5Q06147 TOR1YJR066W 7413 nt2.67□□□□□ -1.98
LCB5Q06147 SPF1YEL031W 3648 nt2.66□□□□□ -1.98
LCB5Q06147 YKL100W-AYKL100W-A 90 nt2.65□□□□□ -1.99
LCB5Q06147 YBL005W-BYBL005W-B 5268 nt2.65□□□□□ -1.99
LCB5Q06147 ARP8YOR141C 2646 nt2.65□□□□□ -1.99
LCB5Q06147 SEC26YDR238C 2922 nt2.64□□□□□ -1.99
LCB5Q06147 RTP1YMR185W 2946 nt2.64□□□□□ -1.99
LCB5Q06147 ISW1YBR245C 3390 nt2.64□□□□□ -1.99
LCB5Q06147 TIM9YEL020W-A 264 nt2.64□□□□□ -1.99
LCB5Q06147 TRS130YMR218C 3309 nt2.63□□□□□ -1.99
LCB5Q06147 CDC53YDL132W 2448 nt2.63□□□□□ -1.99
LCB5Q06147 TRA1YHR099W 11235 nt2.63□□□□□ -1.99
LCB5Q06147 MMS22YLR320W 4365 nt2.61□□□□□ -1.99
LCB5Q06147 RPO41YFL036W 4056 nt2.61□□□□□ -1.99
LCB5Q06147 SAP185YJL098W 3177 nt2.61□□□□□ -1.99
LCB5Q06147 NUP100YKL068W 2880 nt2.61□□□□□ -1.99
LCB5Q06147 UBR1YGR184C 5853 nt2.61□□□□□ -1.99
LCB5Q06147 TBS1YBR150C 3285 nt2.6□□□□□ -1.99
LCB5Q06147 KRE33YNL132W 3171 nt2.59□□□□□ -1.99
LCB5Q06147 YJR039WYJR039W 3366 nt2.59□□□□□ -2
LCB5Q06147 PDR1YGL013C 3207 nt2.58□□□□□ -2
LCB5Q06147 SEC10YLR166C 2616 nt2.56□□□□□ -2
LCB5Q06147 SEC21YNL287W 2808 nt2.56□□□□□ -2
LCB5Q06147 UBP3YER151C 2739 nt2.55□□□□□ -2
LCB5Q06147 RSM22YKL155C 1887 nt2.54□□□□□ -2
LCB5Q06147 PSD2YGR170W 3417 nt2.54□□□□□ -2
LCB5Q06147 SLI15YBR156C 2097 nt2.53□□□□□ -2
LCB5Q06147 CDC60YPL160W 3273 nt2.53□□□□□ -2
LCB5Q06147 YOR055WYOR055W 435 nt2.53□□□□□ -2
LCB5Q06147 MET18YIL128W 3099 nt2.53□□□□□ -2
LCB5Q06147 FRK1YPL141C 2598 nt2.53□□□□□ -2.01
LCB5Q06147 POL5YEL055C 3069 nt2.52□□□□□ -2.01
LCB5Q06147 RAV1YJR033C 4074 nt2.51□□□□□ -2.01
LCB5Q06147 SMC6YLR383W 3345 nt2.51□□□□□ -2.01
LCB5Q06147 ADR1YDR216W 3972 nt2.51□□□□□ -2.01
LCB5Q06147 YEF3YLR249W 3135 nt2.5□□□□□ -2.01
LCB5Q06147 MSH5YDL154W 2706 nt2.5□□□□□ -2.01
LCB5Q06147 SKI7YOR076C 2244 nt2.5□□□□□ -2.01
LCB5Q06147 GIP3YPL137C 3831 nt2.49□□□□□ -2.01
LCB5Q06147 YGR122C-AYGR122C-A 129 nt2.49□□□□□ -2.01
LCB5Q06147 PIK1YNL267W 3201 nt2.49□□□□□ -2.01
LCB5Q06147 AZF1YOR113W 2745 nt2.48□□□□□ -2.01
LCB5Q06147 PDR11YIL013C 4236 nt2.48□□□□□ -2.01
LCB5Q06147 COA6YMR244C-A 315 nt2.48□□□□□ -2.01
LCB5Q06147 YBR200W-AYBR200W-A 165 nt2.48□□□□□ -2.01
LCB5Q06147 RPM2YML091C 3609 nt2.48□□□□□ -2.01
LCB5Q06147 IRA2YOL081W 9240 nt2.48□□□□□ -2.01
LCB5Q06147 YOL098CYOL098C 3114 nt2.47□□□□□ -2.01
LCB5Q06147 NUP170YBL079W 4509 nt2.47□□□□□ -2.01
LCB5Q06147 UFD4YKL010C 4452 nt2.47□□□□□ -2.01
LCB5Q06147 SCP160YJL080C 3669 nt2.47□□□□□ -2.01
LCB5Q06147 YER172C-AYER172C-A 381 nt2.47□□□□□ -2.01
LCB5Q06147 MGA2YIR033W 3342 nt2.47□□□□□ -2.01
LCB5Q06147 VPS13YLL040C 9435 nt2.46□□□□□ -2.02
LCB5Q06147 DNF1YER166W 4716 nt2.46□□□□□ -2.02
LCB5Q06147 BUD2YKL092C 3315 nt2.46□□□□□ -2.02
LCB5Q06147 TOF1YNL273W 3717 nt2.44□□□□□ -2.02
LCB5Q06147 TUS1YLR425W 3924 nt2.43□□□□□ -2.02
LCB5Q06147 HSL1YKL101W 4557 nt2.42□□□□□ -2.02
LCB5Q06147 WAR1YML076C 2835 nt2.42□□□□□ -2.02
LCB5Q06147 VPS8YAL002W 3825 nt2.42□□□□□ -2.02
LCB5Q06147 BEM3YPL115C 3387 nt2.42□□□□□ -2.02
LCB5Q06147 AGC1YPR021C 2709 nt2.42□□□□□ -2.02
LCB5Q06147 SEY1YOR165W 2331 nt2.42□□□□□ -2.02
LCB5Q06147 BRE1YDL074C 2103 nt2.42□□□□□ -2.02
LCB5Q06147 TRL1YJL087C 2484 nt2.42□□□□□ -2.02
LCB5Q06147 AI1Q0050 2505 nt2.41□□□□□ -2.02
LCB5Q06147 YPR097WYPR097W 3222 nt2.41□□□□□ -2.02
LCB5Q06147 RPL26BYGR034W 384 nt2.41□□□□□ -2.02
LCB5Q06147 STH1YIL126W 4080 nt2.41□□□□□ -2.02
LCB5Q06147 YLR299C-AYLR299C-A 93 nt2.4□□□□□ -2.03
LCB5Q06147 snR38snR38 95 nt2.4□□□□□ -2.03
LCB5Q06147 SFB2YNL049C 2631 nt2.4□□□□□ -2.03
LCB5Q06147 RGA1YOR127W 3024 nt2.4□□□□□ -2.03
LCB5Q06147 INO80YGL150C 4470 nt2.4□□□□□ -2.03
LCB5Q06147 MSB1YOR188W 3414 nt2.39□□□□□ -2.03
LCB5Q06147 RPL41AYDL184C 78 nt2.39□□□□□ -2.03
LCB5Q06147 YOR343W-BYOR343W-B 5313 nt2.38□□□□□ -2.03
LCB5Q06147 ALY2YJL084C 3141 nt2.38□□□□□ -2.03
LCB5Q06147 REV3YPL167C 4515 nt2.38□□□□□ -2.03
LCB5Q06147 SMC1YFL008W 3678 nt2.37□□□□□ -2.03
LCB5Q06147 CHC1YGL206C 4962 nt2.37□□□□□ -2.03
LCB5Q06147 BNI1YNL271C 5862 nt2.37□□□□□ -2.03
LCB5Q06147 NNF2YGR089W 2811 nt2.36□□□□□ -2.03
LCB5Q06147 tD(GUC)QtD(GUC)Q 75 nt2.36□□□□□ -2.03
LCB5Q06147 RTT101YJL047C 2529 nt2.36□□□□□ -2.03
LCB5Q06147 YDL073WYDL073W 2955 nt2.36□□□□□ -2.03
LCB5Q06147 RAD9YDR217C 3930 nt2.35□□□□□ -2.03
LCB5Q06147 SYH1YPL105C 2550 nt2.35□□□□□ -2.03
LCB5Q06147 SPP41YDR464W 4308 nt2.34□□□□□ -2.03
LCB5Q06147 SCD5YOR329C 2619 nt2.34□□□□□ -2.03
LCB5Q06147 ANS1YHR126C 480 nt2.32□□□□□ -2.04
LCB5Q06147 YHR180W-AYHR180W-A 183 nt2.32□□□□□ -2.04
LCB5Q06147 SPO24YPR036W-A 204 nt2.32□□□□□ -2.04
LCB5Q06147 YBR296C-AYBR296C-A 120 nt2.32□□□□□ -2.04
Retrieved 100 of 7,029 protein–RNA pairs in 11 ms