Protein–RNA interactions for Protein: Q03834

MSH6, DNA mismatch repair protein MSH6, yeastyeast

Predictions only

Length 1,242 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH6Q03834 snR81snR81 201 nt2.3□□□□□ -2.04
MSH6Q03834 YIL002W-AYIL002W-A 210 nt2.3□□□□□ -2.04
MSH6Q03834 SAP185YJL098W 3177 nt2.3□□□□□ -2.04
MSH6Q03834 MSH6YDR097C 3729 nt2.3□□□□□ -2.04
MSH6Q03834 MDS3YGL197W 4464 nt2.29□□□□□ -2.04
MSH6Q03834 YJL052C-AYJL052C-A 120 nt2.29□□□□□ -2.04
MSH6Q03834 SIR4YDR227W 4077 nt2.29□□□□□ -2.04
MSH6Q03834 YPR097WYPR097W 3222 nt2.29□□□□□ -2.04
MSH6Q03834 TFC3YAL001C 3483 nt2.28□□□□□ -2.04
MSH6Q03834 snR62snR62 100 nt2.28□□□□□ -2.04
MSH6Q03834 YHR131W-AYHR131W-A 246 nt2.28□□□□□ -2.04
MSH6Q03834 YAL067W-AYAL067W-A 228 nt2.28□□□□□ -2.04
MSH6Q03834 ADR1YDR216W 3972 nt2.27□□□□□ -2.05
MSH6Q03834 BRE1YDL074C 2103 nt2.27□□□□□ -2.05
MSH6Q03834 YMR045CYMR045C 5268 nt2.26□□□□□ -2.05
MSH6Q03834 SLX4YLR135W 2247 nt2.26□□□□□ -2.05
MSH6Q03834 UTP22YGR090W 3714 nt2.26□□□□□ -2.05
MSH6Q03834 SFB2YNL049C 2631 nt2.25□□□□□ -2.05
MSH6Q03834 TOR2YKL203C 7425 nt2.25□□□□□ -2.05
MSH6Q03834 YGL182CYGL182C 324 nt2.25□□□□□ -2.05
MSH6Q03834 snR39BsnR39B 96 nt2.25□□□□□ -2.05
MSH6Q03834 HER1YOR227W 3741 nt2.25□□□□□ -2.05
MSH6Q03834 USO1YDL058W 5373 nt2.24□□□□□ -2.05
MSH6Q03834 SEY1YOR165W 2331 nt2.24□□□□□ -2.05
MSH6Q03834 COG6YNL041C 2520 nt2.24□□□□□ -2.05
MSH6Q03834 RGA1YOR127W 3024 nt2.24□□□□□ -2.05
MSH6Q03834 UBR2YLR024C 5619 nt2.23□□□□□ -2.05
MSH6Q03834 IST2YBR086C 2841 nt2.23□□□□□ -2.05
MSH6Q03834 YDL206WYDL206W 2289 nt2.22□□□□□ -2.05
MSH6Q03834 YJR039WYJR039W 3366 nt2.22□□□□□ -2.05
MSH6Q03834 SPO24YPR036W-A 204 nt2.22□□□□□ -2.05
MSH6Q03834 MYO4YAL029C 4416 nt2.22□□□□□ -2.05
MSH6Q03834 QCR9YGR183C 201 nt2.21□□□□□ -2.06
MSH6Q03834 LHS1YKL073W 2646 nt2.21□□□□□ -2.06
MSH6Q03834 PDR8YLR266C 2106 nt2.21□□□□□ -2.06
MSH6Q03834 UTP21YLR409C 2820 nt2.21□□□□□ -2.06
MSH6Q03834 SPP41YDR464W 4308 nt2.2□□□□□ -2.06
MSH6Q03834 UTP8YGR128C 2142 nt2.2□□□□□ -2.06
MSH6Q03834 UBP2YOR124C 3819 nt2.19□□□□□ -2.06
MSH6Q03834 YER172C-AYER172C-A 381 nt2.19□□□□□ -2.06
MSH6Q03834 DGR1YNL130C-A 147 nt2.19□□□□□ -2.06
MSH6Q03834 EAF1YDR359C 2949 nt2.19□□□□□ -2.06
MSH6Q03834 FAB1YFR019W 6837 nt2.19□□□□□ -2.06
MSH6Q03834 YGL123C-AYGL123C-A 231 nt2.17□□□□□ -2.06
MSH6Q03834 YBL039C-AYBL039C-A 84 nt2.17□□□□□ -2.06
MSH6Q03834 RAD50YNL250W 3939 nt2.17□□□□□ -2.06
MSH6Q03834 YHR214C-BYHR214C-B 5382 nt2.17□□□□□ -2.06
MSH6Q03834 YAL037C-AYAL037C-A 93 nt2.16□□□□□ -2.06
MSH6Q03834 GCN2YDR283C 4980 nt2.15□□□□□ -2.06
MSH6Q03834 UFD2YDL190C 2886 nt2.15□□□□□ -2.07
MSH6Q03834 COA6YMR244C-A 315 nt2.14□□□□□ -2.07
MSH6Q03834 TDA9YML081W 3756 nt2.14□□□□□ -2.07
MSH6Q03834 POL5YEL055C 3069 nt2.14□□□□□ -2.07
MSH6Q03834 RSM22YKL155C 1887 nt2.14□□□□□ -2.07
MSH6Q03834 BFR2YDR299W 1605 nt2.13□□□□□ -2.07
MSH6Q03834 YLL020CYLL020C 306 nt2.13□□□□□ -2.07
MSH6Q03834 SMC1YFL008W 3678 nt2.13□□□□□ -2.07
MSH6Q03834 NEO1YIL048W 3456 nt2.12□□□□□ -2.07
MSH6Q03834 SAC3YDR159W 3906 nt2.12□□□□□ -2.07
MSH6Q03834 YOR161W-AYOR161W-A 81 nt2.11□□□□□ -2.07
MSH6Q03834 GYP5YPL249C 2685 nt2.1□□□□□ -2.07
MSH6Q03834 NUP157YER105C 4176 nt2.1□□□□□ -2.07
MSH6Q03834 NUT1YGL151W 3399 nt2.1□□□□□ -2.07
MSH6Q03834 YLR419WYLR419W 4308 nt2.09□□□□□ -2.07
MSH6Q03834 MYO2YOR326W 4725 nt2.09□□□□□ -2.07
MSH6Q03834 YKL100W-AYKL100W-A 90 nt2.09□□□□□ -2.07
MSH6Q03834 MMS4YBR098W 2076 nt2.09□□□□□ -2.07
MSH6Q03834 EMC5YIL027C 426 nt2.08□□□□□ -2.08
MSH6Q03834 SEC31YDL195W 3822 nt2.07□□□□□ -2.08
MSH6Q03834 TRM3YDL112W 4311 nt2.07□□□□□ -2.08
MSH6Q03834 KIP1YBL063W 3336 nt2.07□□□□□ -2.08
MSH6Q03834 SMC4YLR086W 4257 nt2.06□□□□□ -2.08
MSH6Q03834 YMR247W-AYMR247W-A 144 nt2.06□□□□□ -2.08
MSH6Q03834 TAH1YCR060W 336 nt2.05□□□□□ -2.08
MSH6Q03834 YBR072C-AYBR072C-A 162 nt2.05□□□□□ -2.08
MSH6Q03834 SET3YKR029C 2256 nt2.05□□□□□ -2.08
MSH6Q03834 KAP120YPL125W 3099 nt2.04□□□□□ -2.08
MSH6Q03834 YDR210WYDR210W 228 nt2.04□□□□□ -2.08
MSH6Q03834 COX5BYIL111W 456 nt2.04□□□□□ -2.08
MSH6Q03834 YAR009CYAR009C 3591 nt2.04□□□□□ -2.08
MSH6Q03834 ALY2YJL084C 3141 nt2.04□□□□□ -2.08
MSH6Q03834 REV3YPL167C 4515 nt2.03□□□□□ -2.08
MSH6Q03834 TBS1YBR150C 3285 nt2.03□□□□□ -2.08
MSH6Q03834 TMA7YLR262C-A 195 nt2.03□□□□□ -2.08
MSH6Q03834 snR14snR14 160 nt2.03□□□□□ -2.08
MSH6Q03834 PAN2YGL094C 3348 nt2.03□□□□□ -2.08
MSH6Q03834 BIR1YJR089W 2865 nt2.03□□□□□ -2.08
MSH6Q03834 YBL071C-BYBL071C-B 99 nt2.02□□□□□ -2.09
MSH6Q03834 MGA2YIR033W 3342 nt2.02□□□□□ -2.09
MSH6Q03834 YOR093CYOR093C 4947 nt2.01□□□□□ -2.09
MSH6Q03834 YNL266WYNL266W 420 nt2.01□□□□□ -2.09
MSH6Q03834 RTP1YMR185W 2946 nt2.01□□□□□ -2.09
MSH6Q03834 ATG9YDL149W 2994 nt2□□□□□ -2.09
MSH6Q03834 YOL083C-AYOL083C-A 141 nt2□□□□□ -2.09
MSH6Q03834 YML002WYML002W 2214 nt2□□□□□ -2.09
MSH6Q03834 YDR034C-AYDR034C-A 177 nt1.99□□□□□ -2.09
MSH6Q03834 SEC1YDR164C 2175 nt1.99□□□□□ -2.09
MSH6Q03834 tM(CAU)Q2tM(CAU)Q2 78 nt1.98□□□□□ -2.09
MSH6Q03834 SEC21YNL287W 2808 nt1.97□□□□□ -2.09
MSH6Q03834 PEP1YBL017C 4740 nt1.96□□□□□ -2.09
Retrieved 100 of 7,029 protein–RNA pairs in 60.5 ms