Protein–RNA interactions for Protein: P49588

AARS, Alanine--tRNA ligase, cytoplasmic, humanhuman

Known RBP eCLIP

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AARSP49588 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.364e-7■■□□□ 12.2
AARSP49588 HNRNPM-208ENST00000597270 1147 ntTSL 222.06■■□□□ 1.124e-7■■□□□ 12.2
AARSP49588 HNRNPM-214ENST00000600806 2373 ntTSL 520.21■□□□□ 0.834e-7■■□□□ 12.2
AARSP49588 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.824e-7■■□□□ 12.2
AARSP49588 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.684e-7■■□□□ 12.2
AARSP49588 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC15.11■□□□□ 0.015e-6■■□□□ 12.2
AARSP49588 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC14.3□□□□□ -0.125e-6■■□□□ 12.2
AARSP49588 EIF4G1-221ENST00000441154 4311 ntTSL 5 BASIC11.23□□□□□ -0.615e-6■■□□□ 12.2
AARSP49588 DAZAP1-207ENST00000589484 3414 ntTSL 214.08□□□□□ -0.162e-6■■□□□ 12.1
AARSP49588 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.13e-6■■□□□ 12.1
AARSP49588 UBR5-206ENST00000519528 325 ntTSL 311.51□□□□□ -0.579e-11■■□□□ 12.1
AARSP49588 EFTUD2-217ENST00000590124 899 ntTSL 321.59■■□□□ 1.055e-7■■□□□ 12
AARSP49588 EFTUD2-214ENST00000589769 689 ntTSL 316.14■□□□□ 0.175e-7■■□□□ 12
AARSP49588 EFTUD2-202ENST00000426333 4548 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.545e-7■■□□□ 12
AARSP49588 EFTUD2-201ENST00000402521 3045 ntTSL 2 BASIC10.52□□□□□ -0.725e-7■■□□□ 12
AARSP49588 EFTUD2-219ENST00000590977 2422 ntTSL 210.41□□□□□ -0.745e-7■■□□□ 12
AARSP49588 EFTUD2-223ENST00000592576 3364 ntTSL 2 BASIC9.8□□□□□ -0.845e-7■■□□□ 12
AARSP49588 EFTUD2-205ENST00000586276 3678 ntTSL 29.29□□□□□ -0.925e-7■■□□□ 12
AARSP49588 EFTUD2-218ENST00000590367 3638 ntTSL 28.74□□□□□ -1.015e-7■■□□□ 12
AARSP49588 EFTUD2-220ENST00000591382 3675 ntAPPRIS P1 TSL 2 BASIC8.47□□□□□ -1.055e-7■■□□□ 12
AARSP49588 DGCR8-209ENST00000495826 4695 ntTSL 1 (best)15.32■□□□□ 0.044e-6■■□□□ 12
AARSP49588 DGCR8-203ENST00000407755 4129 ntTSL 1 (best) BASIC13.31□□□□□ -0.284e-6■■□□□ 12
AARSP49588 DGCR8-210ENST00000498171 3661 ntTSL 1 (best)13.14□□□□□ -0.314e-6■■□□□ 12
AARSP49588 PDLIM7-206ENST00000463411 1015 ntTSL 224.06■■□□□ 1.444e-9■■□□□ 11.9
AARSP49588 PDLIM7-204ENST00000393546 671 ntTSL 320.51■□□□□ 0.874e-9■■□□□ 11.9
AARSP49588 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.87■□□□□ 0.774e-9■■□□□ 11.9
AARSP49588 PDLIM7-216ENST00000506537 636 ntTSL 219.75■□□□□ 0.754e-9■■□□□ 11.9
AARSP49588 PDLIM7-209ENST00000503346 669 ntTSL 219.74■□□□□ 0.754e-9■■□□□ 11.9
AARSP49588 PDLIM7-207ENST00000486828 1904 ntTSL 1 (best)19.69■□□□□ 0.744e-9■■□□□ 11.9
AARSP49588 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.744e-9■■□□□ 11.9
AARSP49588 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.674e-9■■□□□ 11.9
AARSP49588 PDLIM7-208ENST00000493815 1686 ntTSL 1 (best)19.25■□□□□ 0.674e-9■■□□□ 11.9
AARSP49588 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC18.2■□□□□ 0.54e-9■■□□□ 11.9
AARSP49588 PDLIM7-215ENST00000506161 759 ntTSL 318.2■□□□□ 0.54e-9■■□□□ 11.9
AARSP49588 PDLIM7-213ENST00000505074 931 ntTSL 317.29■□□□□ 0.364e-9■■□□□ 11.9
AARSP49588 PDLIM7-210ENST00000503827 451 ntTSL 517.19■□□□□ 0.344e-9■■□□□ 11.9
AARSP49588 PDLIM7-211ENST00000504318 597 ntTSL 315.28■□□□□ 0.044e-9■■□□□ 11.9
AARSP49588 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC16.15■□□□□ 0.184e-80■■□□□ 11.9
AARSP49588 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC15.48■□□□□ 0.074e-80■■□□□ 11.9
AARSP49588 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.452e-6■■□□□ 11.9
AARSP49588 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC15.58■□□□□ 0.082e-6■■□□□ 11.9
AARSP49588 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC15.03■□□□□ -02e-6■■□□□ 11.9
AARSP49588 AC105402.3-202ENST00000446781 2592 ntTSL 5 BASIC14.37□□□□□ -0.111e-323■■□□□ 11.9
AARSP49588 AC105402.3-201ENST00000601658 784 ntTSL 5 BASIC11.96□□□□□ -0.491e-323■■□□□ 11.9
AARSP49588 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.672e-11■■□□□ 11.8
AARSP49588 GMPR-203ENST00000543191 675 ntTSL 211.03□□□□□ -0.642e-11■■□□□ 11.8
AARSP49588 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.213e-6■■□□□ 11.8
AARSP49588 FASN-207ENST00000635197 627 ntTSL 317.25■□□□□ 0.353e-14■■□□□ 11.8
AARSP49588 FASN-213ENST00000637693 100 ntTSL 510.23□□□□□ -0.773e-14■■□□□ 11.8
AARSP49588 NSD2-219ENST00000508803 4251 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.943e-6■■□□□ 11.7
AARSP49588 NCL-210ENST00000494618 910 ntTSL 25.69□□□□□ -1.55e-7■■□□□ 11.7
AARSP49588 ARFGAP2-210ENST00000526342 474 ntTSL 510.16□□□□□ -0.786e-6■■□□□ 11.7
AARSP49588 THRAP3-201ENST00000354618 4432 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.414e-6■■□□□ 11.7
AARSP49588 FUS-209ENST00000566605 1787 ntTSL 1 (best)27.46■■□□□ 1.994e-6■■□□□ 11.7
AARSP49588 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.774e-6■■□□□ 11.7
AARSP49588 FUS-203ENST00000474990 827 ntTSL 324.56■■□□□ 1.524e-6■■□□□ 11.7
AARSP49588 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.464e-6■■□□□ 11.7
AARSP49588 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.244e-6■■□□□ 11.7
AARSP49588 FUS-206ENST00000487509 4920 ntTSL 214.61□□□□□ -0.074e-6■■□□□ 11.7
AARSP49588 ANP32B-201ENST00000339399 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.242e-32■■□□□ 11.7
AARSP49588 ARF3-205ENST00000536283 537 ntTSL 424.07■■□□□ 1.442e-7■■□□□ 11.6
AARSP49588 ARF3-206ENST00000539611 576 ntTSL 523.15■■□□□ 1.32e-7■■□□□ 11.6
AARSP49588 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC22.57■■□□□ 1.22e-7■■□□□ 11.6
AARSP49588 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.982e-7■■□□□ 11.6
AARSP49588 ARF3-204ENST00000485410 563 ntTSL 320.95■□□□□ 0.942e-7■■□□□ 11.6
AARSP49588 HSPG2-210ENST00000481644 839 ntTSL 220.28■□□□□ 0.841e-9■■□□□ 11.6
AARSP49588 RABL6-208ENST00000464941 3361 ntTSL 218.02■□□□□ 0.481e-11■■□□□ 11.6
AARSP49588 PPIL2-205ENST00000446951 1926 ntTSL 1 (best)15.98■□□□□ 0.155e-6■■□□□ 11.6
AARSP49588 TARS-203ENST00000502508 552 ntTSL 515.85■□□□□ 0.132e-7■■□□□ 11.6
AARSP49588 NAP1L4-206ENST00000469089 707 ntTSL 315.37■□□□□ 0.052e-7■■□□□ 11.6
AARSP49588 ARF3-201ENST00000256682 4105 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.282e-7■■□□□ 11.6
AARSP49588 TARS-213ENST00000513066 656 ntTSL 311.41□□□□□ -0.582e-7■■□□□ 11.6
AARSP49588 TARS-202ENST00000455217 2523 ntTSL 2 BASIC10.9□□□□□ -0.672e-7■■□□□ 11.6
AARSP49588 TARS-210ENST00000508361 2481 ntTSL 210.73□□□□□ -0.692e-7■■□□□ 11.6
AARSP49588 TARS-216ENST00000627006 171 ntTSL 5 BASIC10.71□□□□□ -0.692e-7■■□□□ 11.6
AARSP49588 TARS-212ENST00000509731 2170 ntTSL 1 (best)10.15□□□□□ -0.782e-7■■□□□ 11.6
AARSP49588 AC073610.3-201ENST00000398092 939 ntAPPRIS P1 TSL 3 BASIC9.99□□□□□ -0.812e-7■■□□□ 11.6
AARSP49588 TARS-207ENST00000505012 608 ntTSL 49.91□□□□□ -0.822e-7■■□□□ 11.6
AARSP49588 TARS-204ENST00000502553 2534 ntAPPRIS P1 TSL 2 BASIC9.83□□□□□ -0.842e-7■■□□□ 11.6
AARSP49588 TARS-208ENST00000506040 755 ntTSL 59.45□□□□□ -0.92e-7■■□□□ 11.6
AARSP49588 TARS-209ENST00000507716 2475 ntTSL 28.98□□□□□ -0.972e-7■■□□□ 11.6
AARSP49588 TARS-201ENST00000265112 4314 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.992e-7■■□□□ 11.6
AARSP49588 TARS-214ENST00000514259 466 ntTSL 44.68□□□□□ -1.662e-7■■□□□ 11.6
AARSP49588 TARS-215ENST00000626210 201 ntTSL 5 BASIC-2.31□□□□□ -2.782e-7■■□□□ 11.6
AARSP49588 AC004687.1-201ENST00000579003 1625 ntBASIC23.65■■□□□ 1.382e-7■■□□□ 11.6
AARSP49588 FBXO18-208ENST00000470089 979 ntTSL 531.71■■■□□ 2.674e-6■■□□□ 11.6
AARSP49588 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC27.97■■■□□ 2.074e-6■■□□□ 11.6
AARSP49588 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC26.74■■□□□ 1.874e-6■■□□□ 11.6
AARSP49588 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC26.52■■□□□ 1.844e-6■■□□□ 11.6
AARSP49588 C11orf80-209ENST00000527368 812 ntTSL 525.04■■□□□ 1.64e-6■■□□□ 11.6
AARSP49588 C11orf80-202ENST00000524551 548 ntAPPRIS ALT2 TSL 521.62■■□□□ 1.054e-6■■□□□ 11.6
AARSP49588 STX5-205ENST00000486437 560 ntTSL 421.06■□□□□ 0.964e-6■■□□□ 11.6
AARSP49588 C11orf80-217ENST00000534325 583 ntAPPRIS ALT2 TSL 320.54■□□□□ 0.884e-6■■□□□ 11.6
AARSP49588 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.834e-6■■□□□ 11.6
AARSP49588 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC19.22■□□□□ 0.674e-6■■□□□ 11.6
AARSP49588 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.654e-6■■□□□ 11.6
AARSP49588 STX5-206ENST00000488303 604 ntTSL 517.92■□□□□ 0.464e-6■■□□□ 11.6
AARSP49588 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.38■□□□□ 0.374e-6■■□□□ 11.6
AARSP49588 WSB1-214ENST00000583742 544 ntTSL 416.67■□□□□ 0.264e-6■■□□□ 11.6
AARSP49588 WSB1-206ENST00000578312 692 ntTSL 416.67■□□□□ 0.264e-6■■□□□ 11.6
Retrieved 100 of 8,200 protein–RNA pairs in 101.2 ms