Protein–RNA interactions for Protein: P47180

PGU1, Polygalacturonase, yeastyeast

Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PGU1P47180 YEL020C-BYEL020C-B 198 nt0.99□□□□□ -2.25
PGU1P47180 STF2YGR008C 255 nt0.99□□□□□ -2.25
PGU1P47180 YJL120WYJL120W 324 nt0.99□□□□□ -2.25
PGU1P47180 YLR120W-AYLR120W-A 102 nt0.99□□□□□ -2.25
PGU1P47180 HUG1YML058W-A 207 nt0.99□□□□□ -2.25
PGU1P47180 YMR307C-AYMR307C-A 195 nt0.99□□□□□ -2.25
PGU1P47180 NUP145YGL092W 3954 nt0.99□□□□□ -2.25
PGU1P47180 EAF1YDR359C 2949 nt0.99□□□□□ -2.25
PGU1P47180 SET3YKR029C 2256 nt0.98□□□□□ -2.25
PGU1P47180 YLL020CYLL020C 306 nt0.98□□□□□ -2.25
PGU1P47180 SGF11YPL047W 300 nt0.98□□□□□ -2.25
PGU1P47180 YBR206WYBR206W 324 nt0.98□□□□□ -2.25
PGU1P47180 SPT7YBR081C 3999 nt0.98□□□□□ -2.25
PGU1P47180 SWI4YER111C 3282 nt0.97□□□□□ -2.25
PGU1P47180 NUP188YML103C 4968 nt0.97□□□□□ -2.25
PGU1P47180 RAD9YDR217C 3930 nt0.96□□□□□ -2.26
PGU1P47180 YMR172C-AYMR172C-A 384 nt0.96□□□□□ -2.26
PGU1P47180 YNL284C-BYNL284C-B 5268 nt0.96□□□□□ -2.26
PGU1P47180 NST1YNL091W 3723 nt0.96□□□□□ -2.26
PGU1P47180 ALY2YJL084C 3141 nt0.95□□□□□ -2.26
PGU1P47180 OLI1Q0130 231 nt0.95□□□□□ -2.26
PGU1P47180 YIL020C-AYIL020C-A 339 nt0.95□□□□□ -2.26
PGU1P47180 YOR015WYOR015W 360 nt0.95□□□□□ -2.26
PGU1P47180 PAN2YGL094C 3348 nt0.94□□□□□ -2.26
PGU1P47180 YGL041CYGL041C 204 nt0.94□□□□□ -2.26
PGU1P47180 YMR158W-BYMR158W-B 321 nt0.94□□□□□ -2.26
PGU1P47180 ABF2YMR072W 552 nt0.93□□□□□ -2.26
PGU1P47180 PAA1YDR071C 576 nt0.92□□□□□ -2.26
PGU1P47180 YLL019W-AYLL019W-A 93 nt0.92□□□□□ -2.26
PGU1P47180 APL1YJR005W 2103 nt0.92□□□□□ -2.26
PGU1P47180 ROM2YLR371W 4071 nt0.91□□□□□ -2.26
PGU1P47180 YBR182C-AYBR182C-A 195 nt0.9□□□□□ -2.27
PGU1P47180 snR74snR74 88 nt0.89□□□□□ -2.27
PGU1P47180 YDR354C-AYDR354C-A 144 nt0.89□□□□□ -2.27
PGU1P47180 YNL211CYNL211C 261 nt0.89□□□□□ -2.27
PGU1P47180 YPL044CYPL044C 549 nt0.89□□□□□ -2.27
PGU1P47180 YKU70YMR284W 1809 nt0.89□□□□□ -2.27
PGU1P47180 snR80snR80 171 nt0.88□□□□□ -2.27
PGU1P47180 ISD11YER048W-A 285 nt0.88□□□□□ -2.27
PGU1P47180 ULI1YFR026C 510 nt0.88□□□□□ -2.27
PGU1P47180 CMC4YMR194C-B 222 nt0.88□□□□□ -2.27
PGU1P47180 VAM6YDL077C 3150 nt0.88□□□□□ -2.27
PGU1P47180 MDS3YGL197W 4464 nt0.87□□□□□ -2.27
PGU1P47180 YCR018C-AYCR018C-A 255 nt0.87□□□□□ -2.27
PGU1P47180 YJR029WYJR029W 5268 nt0.86□□□□□ -2.27
PGU1P47180 YPR137C-BYPR137C-B 5268 nt0.86□□□□□ -2.27
PGU1P47180 tF(GAA)QtF(GAA)Q 75 nt0.86□□□□□ -2.27
PGU1P47180 YDL196WYDL196W 330 nt0.85□□□□□ -2.27
PGU1P47180 SPG3YDR504C 384 nt0.85□□□□□ -2.27
PGU1P47180 RPL26BYGR034W 384 nt0.85□□□□□ -2.27
PGU1P47180 NOP9YJL010C 2001 nt0.85□□□□□ -2.27
PGU1P47180 YEL014CYEL014C 306 nt0.84□□□□□ -2.27
PGU1P47180 YIR030W-AYIR030W-A 384 nt0.84□□□□□ -2.27
PGU1P47180 BEM2YER155C 6504 nt0.84□□□□□ -2.28
PGU1P47180 YAL067W-AYAL067W-A 228 nt0.83□□□□□ -2.28
PGU1P47180 STB6YKL072W 2301 nt0.83□□□□□ -2.28
PGU1P47180 YPR117WYPR117W 7470 nt0.82□□□□□ -2.28
PGU1P47180 PAM16YJL104W 450 nt0.82□□□□□ -2.28
PGU1P47180 YKL100W-AYKL100W-A 90 nt0.82□□□□□ -2.28
PGU1P47180 PRP16YKR086W 3216 nt0.82□□□□□ -2.28
PGU1P47180 DOP1YDR141C 5097 nt0.81□□□□□ -2.28
PGU1P47180 NPR2YEL062W 1848 nt0.81□□□□□ -2.28
PGU1P47180 EMT1tM(CAU)D 73 nt0.81□□□□□ -2.28
PGU1P47180 EMT5tM(CAU)J1 73 nt0.81□□□□□ -2.28
PGU1P47180 EMT3tM(CAU)J2 73 nt0.81□□□□□ -2.28
PGU1P47180 EMT4tM(CAU)M 73 nt0.81□□□□□ -2.28
PGU1P47180 EMT2tM(CAU)O2 73 nt0.81□□□□□ -2.28
PGU1P47180 BLI1YKL061W 342 nt0.81□□□□□ -2.28
PGU1P47180 RPS30BYOR182C 192 nt0.81□□□□□ -2.28
PGU1P47180 UBP3YER151C 2739 nt0.81□□□□□ -2.28
PGU1P47180 NUP157YER105C 4176 nt0.81□□□□□ -2.28
PGU1P47180 UTP8YGR128C 2142 nt0.8□□□□□ -2.28
PGU1P47180 SCC2YDR180W 4482 nt0.8□□□□□ -2.28
PGU1P47180 YDR406W-AYDR406W-A 246 nt0.8□□□□□ -2.28
PGU1P47180 YJL026C-AYJL026C-A 222 nt0.8□□□□□ -2.28
PGU1P47180 YOR345CYOR345C 351 nt0.8□□□□□ -2.28
PGU1P47180 COY1YKL179C 2040 nt0.79□□□□□ -2.28
PGU1P47180 CDC39YCR093W 6327 nt0.79□□□□□ -2.28
PGU1P47180 YGL123C-AYGL123C-A 231 nt0.79□□□□□ -2.28
PGU1P47180 tM(CAU)Q1tM(CAU)Q1 76 nt0.79□□□□□ -2.28
PGU1P47180 YMR046W-AYMR046W-A 129 nt0.79□□□□□ -2.28
PGU1P47180 YBR131C-AYBR131C-A 90 nt0.79□□□□□ -2.28
PGU1P47180 PAU24YBR301W 363 nt0.79□□□□□ -2.28
PGU1P47180 JLP2YMR132C 627 nt0.78□□□□□ -2.28
PGU1P47180 KAP120YPL125W 3099 nt0.78□□□□□ -2.29
PGU1P47180 YIL142C-AYIL142C-A 333 nt0.77□□□□□ -2.29
PGU1P47180 YOR302WYOR302W 78 nt0.77□□□□□ -2.29
PGU1P47180 snR190snR190 190 nt0.77□□□□□ -2.29
PGU1P47180 YML002WYML002W 2214 nt0.77□□□□□ -2.29
PGU1P47180 YCR038W-AYCR038W-A 126 nt0.76□□□□□ -2.29
PGU1P47180 YLR282CYLR282C 342 nt0.76□□□□□ -2.29
PGU1P47180 BEM3YPL115C 3387 nt0.75□□□□□ -2.29
PGU1P47180 SEC8YPR055W 3198 nt0.75□□□□□ -2.29
PGU1P47180 YDL073WYDL073W 2955 nt0.75□□□□□ -2.29
PGU1P47180 YFR012W-AYFR012W-A 87 nt0.74□□□□□ -2.29
PGU1P47180 YDL185C-AYDL185C-A 228 nt0.73□□□□□ -2.29
PGU1P47180 COX5BYIL111W 456 nt0.73□□□□□ -2.29
PGU1P47180 COX12YLR038C 252 nt0.73□□□□□ -2.29
PGU1P47180 YOR161W-AYOR161W-A 81 nt0.73□□□□□ -2.29
PGU1P47180 BUD3YCL014W 4911 nt0.72□□□□□ -2.29
Retrieved 100 of 7,029 protein–RNA pairs in 79.3 ms