Protein–RNA interactions for Protein: P40016

RPN3, 26S proteasome regulatory subunit RPN3, yeastyeast

Known RBP Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN3P40016 YNL211CYNL211C 261 nt2.07□□□□□ -2.08
RPN3P40016 SPO24YPR036W-A 204 nt2.07□□□□□ -2.08
RPN3P40016 SFB2YNL049C 2631 nt2.07□□□□□ -2.08
RPN3P40016 RGA1YOR127W 3024 nt2.07□□□□□ -2.08
RPN3P40016 ADR1YDR216W 3972 nt2.06□□□□□ -2.08
RPN3P40016 FAB1YFR019W 6837 nt2.06□□□□□ -2.08
RPN3P40016 IST2YBR086C 2841 nt2.04□□□□□ -2.08
RPN3P40016 YPR097WYPR097W 3222 nt2.04□□□□□ -2.08
RPN3P40016 NUP157YER105C 4176 nt2.04□□□□□ -2.08
RPN3P40016 YDL206WYDL206W 2289 nt2.04□□□□□ -2.08
RPN3P40016 LHS1YKL073W 2646 nt2.04□□□□□ -2.08
RPN3P40016 YMR272W-BYMR272W-B 108 nt2.04□□□□□ -2.08
RPN3P40016 SEY1YOR165W 2331 nt2.04□□□□□ -2.08
RPN3P40016 MYO4YAL029C 4416 nt2.04□□□□□ -2.08
RPN3P40016 HER1YOR227W 3741 nt2.03□□□□□ -2.08
RPN3P40016 OST4YDL232W 111 nt2.03□□□□□ -2.08
RPN3P40016 UTP21YLR409C 2820 nt2.02□□□□□ -2.09
RPN3P40016 SEC31YDL195W 3822 nt2.02□□□□□ -2.09
RPN3P40016 YAL067W-AYAL067W-A 228 nt2.02□□□□□ -2.09
RPN3P40016 TUS1YLR425W 3924 nt2.02□□□□□ -2.09
RPN3P40016 CHS6YJL099W 2241 nt2.02□□□□□ -2.09
RPN3P40016 FIG2YCR089W 4830 nt2.02□□□□□ -2.09
RPN3P40016 SEC63YOR254C 1992 nt2.01□□□□□ -2.09
RPN3P40016 RAD50YNL250W 3939 nt2□□□□□ -2.09
RPN3P40016 YGL182CYGL182C 324 nt2□□□□□ -2.09
RPN3P40016 YHR217CYHR217C 462 nt2□□□□□ -2.09
RPN3P40016 YGL123C-AYGL123C-A 231 nt1.99□□□□□ -2.09
RPN3P40016 COA6YMR244C-A 315 nt1.99□□□□□ -2.09
RPN3P40016 SIR4YDR227W 4077 nt1.99□□□□□ -2.09
RPN3P40016 UFD2YDL190C 2886 nt1.98□□□□□ -2.09
RPN3P40016 NEO1YIL048W 3456 nt1.97□□□□□ -2.09
RPN3P40016 SOM1YEL059C-A 225 nt1.97□□□□□ -2.09
RPN3P40016 UTP8YGR128C 2142 nt1.97□□□□□ -2.09
RPN3P40016 DNF3YMR162C 4971 nt1.96□□□□□ -2.1
RPN3P40016 snR61snR61 90 nt1.96□□□□□ -2.1
RPN3P40016 YOR161W-AYOR161W-A 81 nt1.96□□□□□ -2.1
RPN3P40016 NUT1YGL151W 3399 nt1.95□□□□□ -2.1
RPN3P40016 YLR282CYLR282C 342 nt1.95□□□□□ -2.1
RPN3P40016 YNL067W-BYNL067W-B 141 nt1.95□□□□□ -2.1
RPN3P40016 STB6YKL072W 2301 nt1.95□□□□□ -2.1
RPN3P40016 UBP2YOR124C 3819 nt1.94□□□□□ -2.1
RPN3P40016 POL5YEL055C 3069 nt1.94□□□□□ -2.1
RPN3P40016 BFR2YDR299W 1605 nt1.94□□□□□ -2.1
RPN3P40016 SMC4YLR086W 4257 nt1.94□□□□□ -2.1
RPN3P40016 YBL039C-AYBL039C-A 84 nt1.93□□□□□ -2.1
RPN3P40016 snR14snR14 160 nt1.93□□□□□ -2.1
RPN3P40016 YLR422WYLR422W 5799 nt1.93□□□□□ -2.1
RPN3P40016 PEP1YBL017C 4740 nt1.92□□□□□ -2.1
RPN3P40016 MON2YNL297C 4911 nt1.92□□□□□ -2.1
RPN3P40016 MYO2YOR326W 4725 nt1.92□□□□□ -2.1
RPN3P40016 QCR9YGR183C 201 nt1.92□□□□□ -2.1
RPN3P40016 EMC5YIL027C 426 nt1.92□□□□□ -2.1
RPN3P40016 YLL020CYLL020C 306 nt1.92□□□□□ -2.1
RPN3P40016 RSM22YKL155C 1887 nt1.92□□□□□ -2.1
RPN3P40016 SLX4YLR135W 2247 nt1.91□□□□□ -2.1
RPN3P40016 GCN2YDR283C 4980 nt1.9□□□□□ -2.1
RPN3P40016 PDR8YLR266C 2106 nt1.9□□□□□ -2.1
RPN3P40016 YJR039WYJR039W 3366 nt1.9□□□□□ -2.11
RPN3P40016 YDL247W-AYDL247W-A 75 nt1.9□□□□□ -2.11
RPN3P40016 MMS4YBR098W 2076 nt1.89□□□□□ -2.11
RPN3P40016 SMC1YFL008W 3678 nt1.89□□□□□ -2.11
RPN3P40016 YAR009CYAR009C 3591 nt1.89□□□□□ -2.11
RPN3P40016 snR39BsnR39B 96 nt1.89□□□□□ -2.11
RPN3P40016 KIP1YBL063W 3336 nt1.89□□□□□ -2.11
RPN3P40016 ALY2YJL084C 3141 nt1.88□□□□□ -2.11
RPN3P40016 TAH1YCR060W 336 nt1.88□□□□□ -2.11
RPN3P40016 EAF1YDR359C 2949 nt1.87□□□□□ -2.11
RPN3P40016 YHR131W-AYHR131W-A 246 nt1.87□□□□□ -2.11
RPN3P40016 COX5BYIL111W 456 nt1.87□□□□□ -2.11
RPN3P40016 YKL100W-AYKL100W-A 90 nt1.87□□□□□ -2.11
RPN3P40016 TRM3YDL112W 4311 nt1.87□□□□□ -2.11
RPN3P40016 ATG9YDL149W 2994 nt1.86□□□□□ -2.11
RPN3P40016 PAN2YGL094C 3348 nt1.86□□□□□ -2.11
RPN3P40016 IRC20YLR247C 4671 nt1.85□□□□□ -2.11
RPN3P40016 MGA2YIR033W 3342 nt1.85□□□□□ -2.11
RPN3P40016 YGL041C-BYGL041C-B 183 nt1.85□□□□□ -2.11
RPN3P40016 CFT1YDR301W 4074 nt1.85□□□□□ -2.11
RPN3P40016 RTP1YMR185W 2946 nt1.84□□□□□ -2.12
RPN3P40016 TBS1YBR150C 3285 nt1.83□□□□□ -2.12
RPN3P40016 PMD1YER132C 5262 nt1.83□□□□□ -2.12
RPN3P40016 SBH1YER087C-B 249 nt1.82□□□□□ -2.12
RPN3P40016 ANS1YHR126C 480 nt1.82□□□□□ -2.12
RPN3P40016 VPS15YBR097W 4365 nt1.82□□□□□ -2.12
RPN3P40016 SKI3YPR189W 4299 nt1.81□□□□□ -2.12
RPN3P40016 YML002WYML002W 2214 nt1.81□□□□□ -2.12
RPN3P40016 SEC21YNL287W 2808 nt1.81□□□□□ -2.12
RPN3P40016 BRR2YER172C 6492 nt1.8□□□□□ -2.12
RPN3P40016 TDA9YML081W 3756 nt1.8□□□□□ -2.12
RPN3P40016 GEA2YEL022W 4380 nt1.8□□□□□ -2.12
RPN3P40016 STO1YMR125W 2586 nt1.8□□□□□ -2.12
RPN3P40016 STF2YGR008C 255 nt1.79□□□□□ -2.12
RPN3P40016 KAP122YGL016W 3246 nt1.79□□□□□ -2.12
RPN3P40016 SET3YKR029C 2256 nt1.78□□□□□ -2.13
RPN3P40016 RCO1YMR075W 2055 nt1.78□□□□□ -2.13
RPN3P40016 FYV10YIL097W 1551 nt1.77□□□□□ -2.13
RPN3P40016 tM(CAU)Q2tM(CAU)Q2 78 nt1.77□□□□□ -2.13
RPN3P40016 TMA7YLR262C-A 195 nt1.77□□□□□ -2.13
RPN3P40016 NOP9YJL010C 2001 nt1.77□□□□□ -2.13
RPN3P40016 KCS1YDR017C 3153 nt1.75□□□□□ -2.13
RPN3P40016 NUP192YJL039C 5052 nt1.74□□□□□ -2.13
Retrieved 100 of 7,029 protein–RNA pairs in 37.9 ms