Protein–RNA interactions for Protein: P39940

RSP5, E3 ubiquitin-protein ligase RSP5, yeastyeast

Known RBP Predictions only

Length 809 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RSP5P39940 SBE22YHR103W 2559 nt1.92□□□□□ -2.1
RSP5P39940 PKH3YDR466W 2697 nt1.92□□□□□ -2.1
RSP5P39940 SLX4YLR135W 2247 nt1.91□□□□□ -2.1
RSP5P39940 YDL247W-AYDL247W-A 75 nt1.91□□□□□ -2.1
RSP5P39940 YLL019W-AYLL019W-A 93 nt1.91□□□□□ -2.1
RSP5P39940 AHC1YOR023C 1701 nt1.91□□□□□ -2.1
RSP5P39940 SMC4YLR086W 4257 nt1.9□□□□□ -2.11
RSP5P39940 YDL196WYDL196W 330 nt1.89□□□□□ -2.11
RSP5P39940 YJL022WYJL022W 309 nt1.89□□□□□ -2.11
RSP5P39940 HAL9YOL089C 3093 nt1.89□□□□□ -2.11
RSP5P39940 YNL103W-AYNL103W-A 90 nt1.88□□□□□ -2.11
RSP5P39940 FIG4YNL325C 2640 nt1.88□□□□□ -2.11
RSP5P39940 YLR422WYLR422W 5799 nt1.87□□□□□ -2.11
RSP5P39940 YHR214C-BYHR214C-B 5382 nt1.87□□□□□ -2.11
RSP5P39940 YER053C-AYER053C-A 114 nt1.86□□□□□ -2.11
RSP5P39940 YOR314W-AYOR314W-A 111 nt1.86□□□□□ -2.11
RSP5P39940 GYP5YPL249C 2685 nt1.85□□□□□ -2.11
RSP5P39940 YOR102WYOR102W 351 nt1.85□□□□□ -2.11
RSP5P39940 YGR109W-BYGR109W-B 4644 nt1.85□□□□□ -2.11
RSP5P39940 KAP122YGL016W 3246 nt1.85□□□□□ -2.11
RSP5P39940 YOR019WYOR019W 2193 nt1.84□□□□□ -2.11
RSP5P39940 PMP2YEL017C-A 132 nt1.84□□□□□ -2.11
RSP5P39940 BST1YFL025C 3090 nt1.84□□□□□ -2.12
RSP5P39940 BPH1YCR032W 6504 nt1.83□□□□□ -2.12
RSP5P39940 YHL015W-AYHL015W-A 84 nt1.82□□□□□ -2.12
RSP5P39940 YBR221W-AYBR221W-A 105 nt1.82□□□□□ -2.12
RSP5P39940 PEP1YBL017C 4740 nt1.82□□□□□ -2.12
RSP5P39940 APL1YJR005W 2103 nt1.81□□□□□ -2.12
RSP5P39940 YAR009CYAR009C 3591 nt1.8□□□□□ -2.12
RSP5P39940 VPS15YBR097W 4365 nt1.8□□□□□ -2.12
RSP5P39940 IRC20YLR247C 4671 nt1.8□□□□□ -2.12
RSP5P39940 MON2YNL297C 4911 nt1.8□□□□□ -2.12
RSP5P39940 YDR354C-AYDR354C-A 144 nt1.8□□□□□ -2.12
RSP5P39940 CLU1YMR012W 3834 nt1.79□□□□□ -2.12
RSP5P39940 RTP1YMR185W 2946 nt1.79□□□□□ -2.12
RSP5P39940 snR61snR61 90 nt1.79□□□□□ -2.12
RSP5P39940 PAA1YDR071C 576 nt1.79□□□□□ -2.12
RSP5P39940 YJL026C-AYJL026C-A 222 nt1.79□□□□□ -2.12
RSP5P39940 snR14snR14 160 nt1.79□□□□□ -2.12
RSP5P39940 YPL044CYPL044C 549 nt1.79□□□□□ -2.12
RSP5P39940 SWI4YER111C 3282 nt1.78□□□□□ -2.12
RSP5P39940 SBH1YER087C-B 249 nt1.78□□□□□ -2.12
RSP5P39940 YFR012W-AYFR012W-A 87 nt1.78□□□□□ -2.12
RSP5P39940 YIL134C-AYIL134C-A 204 nt1.78□□□□□ -2.12
RSP5P39940 CDC31YOR257W 486 nt1.78□□□□□ -2.12
RSP5P39940 YBR099CYBR099C 384 nt1.78□□□□□ -2.12
RSP5P39940 SMC1YFL008W 3678 nt1.78□□□□□ -2.13
RSP5P39940 MYO2YOR326W 4725 nt1.77□□□□□ -2.13
RSP5P39940 tT(UGU)HtT(UGU)H 72 nt1.77□□□□□ -2.13
RSP5P39940 ROM2YLR371W 4071 nt1.77□□□□□ -2.13
RSP5P39940 YCR095W-AYCR095W-A 159 nt1.76□□□□□ -2.13
RSP5P39940 tL(UAA)QtL(UAA)Q 85 nt1.76□□□□□ -2.13
RSP5P39940 YNL067W-BYNL067W-B 141 nt1.76□□□□□ -2.13
RSP5P39940 CDC25YLR310C 4770 nt1.76□□□□□ -2.13
RSP5P39940 POL5YEL055C 3069 nt1.75□□□□□ -2.13
RSP5P39940 SET3YKR029C 2256 nt1.75□□□□□ -2.13
RSP5P39940 NUP145YGL092W 3954 nt1.74□□□□□ -2.13
RSP5P39940 YAL067W-AYAL067W-A 228 nt1.74□□□□□ -2.13
RSP5P39940 RSM22YKL155C 1887 nt1.73□□□□□ -2.13
RSP5P39940 STO1YMR125W 2586 nt1.73□□□□□ -2.13
RSP5P39940 AZF1YOR113W 2745 nt1.73□□□□□ -2.13
RSP5P39940 TTI1YKL033W 3117 nt1.73□□□□□ -2.13
RSP5P39940 EST2YLR318W 2655 nt1.73□□□□□ -2.13
RSP5P39940 OST4YDL232W 111 nt1.72□□□□□ -2.13
RSP5P39940 YNL211CYNL211C 261 nt1.72□□□□□ -2.13
RSP5P39940 YLR419WYLR419W 4308 nt1.72□□□□□ -2.13
RSP5P39940 COA6YMR244C-A 315 nt1.71□□□□□ -2.14
RSP5P39940 EAF1YDR359C 2949 nt1.7□□□□□ -2.14
RSP5P39940 SXM1YDR395W 2835 nt1.7□□□□□ -2.14
RSP5P39940 YLR282CYLR282C 342 nt1.7□□□□□ -2.14
RSP5P39940 APL3YBL037W 3078 nt1.7□□□□□ -2.14
RSP5P39940 RPS30BYOR182C 192 nt1.7□□□□□ -2.14
RSP5P39940 IRA1YBR140C 9279 nt1.7□□□□□ -2.14
RSP5P39940 YOR093CYOR093C 4947 nt1.7□□□□□ -2.14
RSP5P39940 MEC1YBR136W 7107 nt1.69□□□□□ -2.14
RSP5P39940 WAR1YML076C 2835 nt1.69□□□□□ -2.14
RSP5P39940 MDS3YGL197W 4464 nt1.69□□□□□ -2.14
RSP5P39940 YMR272W-BYMR272W-B 108 nt1.69□□□□□ -2.14
RSP5P39940 YBR200W-AYBR200W-A 165 nt1.69□□□□□ -2.14
RSP5P39940 MSN5YDR335W 3675 nt1.68□□□□□ -2.14
RSP5P39940 BRR2YER172C 6492 nt1.68□□□□□ -2.14
RSP5P39940 YCR038W-AYCR038W-A 126 nt1.67□□□□□ -2.14
RSP5P39940 COX12YLR038C 252 nt1.67□□□□□ -2.14
RSP5P39940 YMR247W-AYMR247W-A 144 nt1.67□□□□□ -2.14
RSP5P39940 FIG2YCR089W 4830 nt1.66□□□□□ -2.14
RSP5P39940 CFT1YDR301W 4074 nt1.66□□□□□ -2.14
RSP5P39940 YGL041C-BYGL041C-B 183 nt1.66□□□□□ -2.14
RSP5P39940 YIL142C-AYIL142C-A 333 nt1.66□□□□□ -2.14
RSP5P39940 CMC4YMR194C-B 222 nt1.66□□□□□ -2.14
RSP5P39940 SEC3YER008C 4011 nt1.65□□□□□ -2.15
RSP5P39940 YLL020CYLL020C 306 nt1.65□□□□□ -2.15
RSP5P39940 YKL100W-AYKL100W-A 90 nt1.64□□□□□ -2.15
RSP5P39940 NOP9YJL010C 2001 nt1.64□□□□□ -2.15
RSP5P39940 DNF3YMR162C 4971 nt1.63□□□□□ -2.15
RSP5P39940 NUP188YML103C 4968 nt1.62□□□□□ -2.15
RSP5P39940 PMD1YER132C 5262 nt1.62□□□□□ -2.15
RSP5P39940 SOM1YEL059C-A 225 nt1.62□□□□□ -2.15
RSP5P39940 YIL002W-AYIL002W-A 210 nt1.62□□□□□ -2.15
RSP5P39940 TRM732YMR259C 4263 nt1.61□□□□□ -2.15
RSP5P39940 tS(GCU)Q1tS(GCU)Q1 86 nt1.61□□□□□ -2.15
Retrieved 100 of 7,029 protein–RNA pairs in 9.8 ms