Protein–RNA interactions for Protein: P36534

MRPL40, 54S ribosomal protein L40, mitochondrial, yeastyeast

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MRPL40P36534 YPR160W-AYPR160W-A 81 nt0.37□□□□□ -2.35
MRPL40P36534 YOR192C-BYOR192C-B 5313 nt0.36□□□□□ -2.35
MRPL40P36534 YER078W-AYER078W-A 165 nt0.36□□□□□ -2.35
MRPL40P36534 SBH1YER087C-B 249 nt0.36□□□□□ -2.35
MRPL40P36534 YFR012W-AYFR012W-A 87 nt0.36□□□□□ -2.35
MRPL40P36534 YKL063CYKL063C 504 nt0.36□□□□□ -2.35
MRPL40P36534 YNL211CYNL211C 261 nt0.36□□□□□ -2.35
MRPL40P36534 YPL068CYPL068C 882 nt0.36□□□□□ -2.35
MRPL40P36534 HAL9YOL089C 3093 nt0.36□□□□□ -2.35
MRPL40P36534 YHL046W-AYHL046W-A 327 nt0.35□□□□□ -2.35
MRPL40P36534 COX5BYIL111W 456 nt0.35□□□□□ -2.35
MRPL40P36534 YJL007CYJL007C 315 nt0.35□□□□□ -2.35
MRPL40P36534 YLR399W-AYLR399W-A 105 nt0.35□□□□□ -2.35
MRPL40P36534 UTP8YGR128C 2142 nt0.35□□□□□ -2.35
MRPL40P36534 MLP2YIL149C 5040 nt0.35□□□□□ -2.35
MRPL40P36534 VIK1YPL253C 1944 nt0.34□□□□□ -2.35
MRPL40P36534 YLR406C-AYLR406C-A 150 nt0.34□□□□□ -2.36
MRPL40P36534 YLR434CYLR434C 384 nt0.34□□□□□ -2.36
MRPL40P36534 VPS20YMR077C 666 nt0.34□□□□□ -2.36
MRPL40P36534 YAL067W-AYAL067W-A 228 nt0.33□□□□□ -2.36
MRPL40P36534 YLR334CYLR334C 381 nt0.33□□□□□ -2.36
MRPL40P36534 PRP5YBR237W 2550 nt0.32□□□□□ -2.36
MRPL40P36534 OST4YDL232W 111 nt0.31□□□□□ -2.36
MRPL40P36534 ESP1YGR098C 4893 nt0.31□□□□□ -2.36
MRPL40P36534 YPL225WYPL225W 441 nt0.3□□□□□ -2.36
MRPL40P36534 RPS25BYLR333C 327 nt0.29□□□□□ -2.36
MRPL40P36534 PRP42YDR235W 1635 nt0.28□□□□□ -2.36
MRPL40P36534 YJL120WYJL120W 324 nt0.28□□□□□ -2.36
MRPL40P36534 TAR1YLR154W-C 375 nt0.28□□□□□ -2.36
MRPL40P36534 YNL054W-BYNL054W-B 5250 nt0.27□□□□□ -2.37
MRPL40P36534 SGF11YPL047W 300 nt0.26□□□□□ -2.37
MRPL40P36534 YPL205CYPL205C 345 nt0.25□□□□□ -2.37
MRPL40P36534 YLR202CYLR202C 327 nt0.24□□□□□ -2.37
MRPL40P36534 snR190snR190 190 nt0.24□□□□□ -2.37
MRPL40P36534 CSN9YDR179C 489 nt0.23□□□□□ -2.37
MRPL40P36534 YMR307C-AYMR307C-A 195 nt0.23□□□□□ -2.37
MRPL40P36534 YDL185C-AYDL185C-A 228 nt0.22□□□□□ -2.37
MRPL40P36534 YHR007C-AYHR007C-A 216 nt0.22□□□□□ -2.37
MRPL40P36534 YOL013W-AYOL013W-A 192 nt0.22□□□□□ -2.37
MRPL40P36534 YAR029WYAR029W 225 nt0.21□□□□□ -2.38
MRPL40P36534 YCR018C-AYCR018C-A 255 nt0.2□□□□□ -2.38
MRPL40P36534 YHR138CYHR138C 345 nt0.2□□□□□ -2.38
MRPL40P36534 PRP39YML046W 1890 nt0.2□□□□□ -2.38
MRPL40P36534 YOR345CYOR345C 351 nt0.19□□□□□ -2.38
MRPL40P36534 PRM3YPL192C 402 nt0.17□□□□□ -2.38
MRPL40P36534 YBL100W-BYBL100W-B 5313 nt0.17□□□□□ -2.38
MRPL40P36534 YER079WYER079W 633 nt0.16□□□□□ -2.38
MRPL40P36534 YNL324WYNL324W 396 nt0.16□□□□□ -2.38
MRPL40P36534 YBR285WYBR285W 435 nt0.16□□□□□ -2.38
MRPL40P36534 NNF2YGR089W 2811 nt0.14□□□□□ -2.39
MRPL40P36534 YDR371C-AYDR371C-A 105 nt0.14□□□□□ -2.39
MRPL40P36534 YER137W-AYER137W-A 306 nt0.14□□□□□ -2.39
MRPL40P36534 tN(GUU)QtN(GUU)Q 71 nt0.14□□□□□ -2.39
MRPL40P36534 HTB2YBL002W 396 nt0.14□□□□□ -2.39
MRPL40P36534 YOR121CYOR121C 306 nt0.14□□□□□ -2.39
MRPL40P36534 LEE1YPL054W 906 nt0.14□□□□□ -2.39
MRPL40P36534 ORC3YLL004W 1851 nt0.14□□□□□ -2.39
MRPL40P36534 AGA2YGL032C 264 nt0.13□□□□□ -2.39
MRPL40P36534 RPL35AYDL191W 363 nt0.12□□□□□ -2.39
MRPL40P36534 RPS26AYGL189C 360 nt0.12□□□□□ -2.39
MRPL40P36534 Q0017Q0017 162 nt0.12□□□□□ -2.39
MRPL40P36534 RCO1YMR075W 2055 nt0.12□□□□□ -2.39
MRPL40P36534 SSS1YDR086C 243 nt0.1□□□□□ -2.39
MRPL40P36534 YAR053WYAR053W 297 nt0.1□□□□□ -2.39
MRPL40P36534 COG8YML071C 1824 nt0.1□□□□□ -2.39
MRPL40P36534 YDR354C-AYDR354C-A 144 nt0.09□□□□□ -2.4
MRPL40P36534 YNL146WYNL146W 303 nt0.09□□□□□ -2.4
MRPL40P36534 YJR157WYJR157W 363 nt0.08□□□□□ -2.4
MRPL40P36534 YKL136WYKL136W 399 nt0.08□□□□□ -2.4
MRPL40P36534 COX12YLR038C 252 nt0.08□□□□□ -2.4
MRPL40P36534 snR45snR45 172 nt0.08□□□□□ -2.4
MRPL40P36534 YCR022CYCR022C 345 nt0.07□□□□□ -2.4
MRPL40P36534 tW(UCA)QtW(UCA)Q 74 nt0.07□□□□□ -2.4
MRPL40P36534 YJL026C-AYJL026C-A 222 nt0.07□□□□□ -2.4
MRPL40P36534 YLR282CYLR282C 342 nt0.07□□□□□ -2.4
MRPL40P36534 YOR186C-AYOR186C-A 210 nt0.07□□□□□ -2.4
MRPL40P36534 YPR092WYPR092W 306 nt0.07□□□□□ -2.4
MRPL40P36534 NIP1YMR309C 2439 nt0.06□□□□□ -2.4
MRPL40P36534 ULI1YFR026C 510 nt0.06□□□□□ -2.4
MRPL40P36534 YIL115W-AYIL115W-A 372 nt0.05□□□□□ -2.4
MRPL40P36534 YLR264C-AYLR264C-A 117 nt0.05□□□□□ -2.4
MRPL40P36534 YMR001C-AYMR001C-A 231 nt0.05□□□□□ -2.4
MRPL40P36534 CSE1YGL238W 2883 nt0.03□□□□□ -2.41
MRPL40P36534 RPS27BYHR021C 249 nt0.02□□□□□ -2.41
MRPL40P36534 COY1YKL179C 2040 nt0.02□□□□□ -2.41
MRPL40P36534 MYO1YHR023W 5787 nt0.01□□□□□ -2.41
MRPL40P36534 YDR048CYDR048C 315 nt0.01□□□□□ -2.41
MRPL40P36534 BIL1YOR304C-A 231 nt0.01□□□□□ -2.41
MRPL40P36534 CSE2YNR010W 450 nt0□□□□□ -2.41
MRPL40P36534 YOR161W-AYOR161W-A 81 nt0□□□□□ -2.41
MRPL40P36534 YHR131W-AYHR131W-A 246 nt-0.01□□□□□ -2.41
MRPL40P36534 YAL068W-AYAL068W-A 255 nt-0.01□□□□□ -2.41
MRPL40P36534 YEL020C-BYEL020C-B 198 nt-0.02□□□□□ -2.41
MRPL40P36534 YLL006W-AYLL006W-A 177 nt-0.02□□□□□ -2.41
MRPL40P36534 YKU70YMR284W 1809 nt-0.03□□□□□ -2.41
MRPL40P36534 TAH1YCR060W 336 nt-0.03□□□□□ -2.41
MRPL40P36534 YGR035CYGR035C 351 nt-0.04□□□□□ -2.42
MRPL40P36534 YKL100W-AYKL100W-A 90 nt-0.04□□□□□ -2.42
MRPL40P36534 YAL063C-AYAL063C-A 291 nt-0.04□□□□□ -2.42
MRPL40P36534 SOV1YMR066W 2697 nt-0.05□□□□□ -2.42
Retrieved 100 of 7,029 protein–RNA pairs in 29.4 ms