Protein–RNA interactions for Protein: P17536

TPM1, Tropomyosin-1, yeastyeast

Known RBP Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TPM1P17536 TRS65YGR166W 1683 nt0.38□□□□□ -2.35
TPM1P17536 QCR9YGR183C 201 nt0.38□□□□□ -2.35
TPM1P17536 YHL046W-AYHL046W-A 327 nt0.38□□□□□ -2.35
TPM1P17536 YLR434CYLR434C 384 nt0.38□□□□□ -2.35
TPM1P17536 YOR032W-AYOR032W-A 201 nt0.38□□□□□ -2.35
TPM1P17536 YPR160W-AYPR160W-A 81 nt0.38□□□□□ -2.35
TPM1P17536 YSP1YHR155W 3687 nt0.37□□□□□ -2.35
TPM1P17536 PAU12YGR294W 363 nt0.37□□□□□ -2.35
TPM1P17536 YHR007C-AYHR007C-A 216 nt0.37□□□□□ -2.35
TPM1P17536 YFR012W-AYFR012W-A 87 nt0.36□□□□□ -2.35
TPM1P17536 RPS25BYLR333C 327 nt0.36□□□□□ -2.35
TPM1P17536 YLR334CYLR334C 381 nt0.36□□□□□ -2.35
TPM1P17536 IQG1YPL242C 4488 nt0.36□□□□□ -2.35
TPM1P17536 YAL067W-AYAL067W-A 228 nt0.35□□□□□ -2.35
TPM1P17536 YMR321CYMR321C 318 nt0.35□□□□□ -2.35
TPM1P17536 SGF11YPL047W 300 nt0.35□□□□□ -2.35
TPM1P17536 BIR1YJR089W 2865 nt0.33□□□□□ -2.36
TPM1P17536 YPL225WYPL225W 441 nt0.33□□□□□ -2.36
TPM1P17536 OST4YDL232W 111 nt0.32□□□□□ -2.36
TPM1P17536 ASE1YOR058C 2658 nt0.32□□□□□ -2.36
TPM1P17536 PRP42YDR235W 1635 nt0.31□□□□□ -2.36
TPM1P17536 PRP5YBR237W 2550 nt0.31□□□□□ -2.36
TPM1P17536 YCR018C-AYCR018C-A 255 nt0.31□□□□□ -2.36
TPM1P17536 YHR138CYHR138C 345 nt0.31□□□□□ -2.36
TPM1P17536 YAR029WYAR029W 225 nt0.31□□□□□ -2.36
TPM1P17536 ABF2YMR072W 552 nt0.3□□□□□ -2.36
TPM1P17536 snR190snR190 190 nt0.3□□□□□ -2.36
TPM1P17536 HAL9YOL089C 3093 nt0.29□□□□□ -2.36
TPM1P17536 TAR1YLR154W-C 375 nt0.29□□□□□ -2.36
TPM1P17536 YMR307C-AYMR307C-A 195 nt0.29□□□□□ -2.36
TPM1P17536 Q0017Q0017 162 nt0.29□□□□□ -2.36
TPM1P17536 MLP2YIL149C 5040 nt0.29□□□□□ -2.36
TPM1P17536 STE5YDR103W 2754 nt0.28□□□□□ -2.36
TPM1P17536 YBL100W-BYBL100W-B 5313 nt0.28□□□□□ -2.36
TPM1P17536 YBR285WYBR285W 435 nt0.28□□□□□ -2.36
TPM1P17536 YJL120WYJL120W 324 nt0.27□□□□□ -2.37
TPM1P17536 YNL324WYNL324W 396 nt0.27□□□□□ -2.37
TPM1P17536 YOR192C-BYOR192C-B 5313 nt0.27□□□□□ -2.37
TPM1P17536 CSN9YDR179C 489 nt0.26□□□□□ -2.37
TPM1P17536 HTB2YBL002W 396 nt0.23□□□□□ -2.37
TPM1P17536 YOR121CYOR121C 306 nt0.23□□□□□ -2.37
TPM1P17536 YAR053WYAR053W 297 nt0.22□□□□□ -2.37
TPM1P17536 YNL054W-BYNL054W-B 5250 nt0.22□□□□□ -2.37
TPM1P17536 PRM3YPL192C 402 nt0.21□□□□□ -2.38
TPM1P17536 YER137W-AYER137W-A 306 nt0.2□□□□□ -2.38
TPM1P17536 YOL013W-AYOL013W-A 192 nt0.2□□□□□ -2.38
TPM1P17536 YDL185C-AYDL185C-A 228 nt0.19□□□□□ -2.38
TPM1P17536 AGA2YGL032C 264 nt0.19□□□□□ -2.38
TPM1P17536 LEE1YPL054W 906 nt0.19□□□□□ -2.38
TPM1P17536 NNF2YGR089W 2811 nt0.19□□□□□ -2.38
TPM1P17536 YKL136WYKL136W 399 nt0.17□□□□□ -2.38
TPM1P17536 YDR371C-AYDR371C-A 105 nt0.16□□□□□ -2.38
TPM1P17536 YER079WYER079W 633 nt0.16□□□□□ -2.38
TPM1P17536 THO2YNL139C 4794 nt0.16□□□□□ -2.38
TPM1P17536 YLR264C-AYLR264C-A 117 nt0.15□□□□□ -2.39
TPM1P17536 YMR001C-AYMR001C-A 231 nt0.15□□□□□ -2.39
TPM1P17536 CSE2YNR010W 450 nt0.14□□□□□ -2.39
TPM1P17536 BIL1YOR304C-A 231 nt0.14□□□□□ -2.39
TPM1P17536 YOR345CYOR345C 351 nt0.14□□□□□ -2.39
TPM1P17536 RPL35AYDL191W 363 nt0.13□□□□□ -2.39
TPM1P17536 RPS26AYGL189C 360 nt0.13□□□□□ -2.39
TPM1P17536 tN(GUU)QtN(GUU)Q 71 nt0.13□□□□□ -2.39
TPM1P17536 ORC3YLL004W 1851 nt0.12□□□□□ -2.39
TPM1P17536 YER078W-AYER078W-A 165 nt0.12□□□□□ -2.39
TPM1P17536 YLR282CYLR282C 342 nt0.12□□□□□ -2.39
TPM1P17536 YOR186C-AYOR186C-A 210 nt0.12□□□□□ -2.39
TPM1P17536 COX12YLR038C 252 nt0.11□□□□□ -2.39
TPM1P17536 SSS1YDR086C 243 nt0.1□□□□□ -2.39
TPM1P17536 RPS27BYHR021C 249 nt0.1□□□□□ -2.39
TPM1P17536 ESP1YGR098C 4893 nt0.1□□□□□ -2.39
TPM1P17536 YDR354C-AYDR354C-A 144 nt0.09□□□□□ -2.4
TPM1P17536 YJR157WYJR157W 363 nt0.09□□□□□ -2.4
TPM1P17536 YAL063C-AYAL063C-A 291 nt0.08□□□□□ -2.4
TPM1P17536 YDR048CYDR048C 315 nt0.07□□□□□ -2.4
TPM1P17536 YNL146WYNL146W 303 nt0.07□□□□□ -2.4
TPM1P17536 YLL006W-AYLL006W-A 177 nt0.06□□□□□ -2.4
TPM1P17536 COY1YKL179C 2040 nt0.06□□□□□ -2.4
TPM1P17536 COG8YML071C 1824 nt0.06□□□□□ -2.4
TPM1P17536 NIP1YMR309C 2439 nt0.05□□□□□ -2.4
TPM1P17536 tW(UCA)QtW(UCA)Q 74 nt0.05□□□□□ -2.4
TPM1P17536 YAL068W-AYAL068W-A 255 nt0.05□□□□□ -2.4
TPM1P17536 RCO1YMR075W 2055 nt0.04□□□□□ -2.4
TPM1P17536 YCR022CYCR022C 345 nt0.04□□□□□ -2.4
TPM1P17536 ULI1YFR026C 510 nt0.04□□□□□ -2.4
TPM1P17536 YKL100W-AYKL100W-A 90 nt0.04□□□□□ -2.4
TPM1P17536 YPR092WYPR092W 306 nt0.04□□□□□ -2.4
TPM1P17536 YHR131W-AYHR131W-A 246 nt0.03□□□□□ -2.4
TPM1P17536 BLI1YKL061W 342 nt0.01□□□□□ -2.41
TPM1P17536 YEL020C-BYEL020C-B 198 nt0□□□□□ -2.41
TPM1P17536 YJL026C-AYJL026C-A 222 nt0□□□□□ -2.41
TPM1P17536 YGL123C-AYGL123C-A 231 nt-0.01□□□□□ -2.41
TPM1P17536 YIL115W-AYIL115W-A 372 nt-0.01□□□□□ -2.41
TPM1P17536 YGR035CYGR035C 351 nt-0.02□□□□□ -2.41
TPM1P17536 YOR293C-AYOR293C-A 150 nt-0.04□□□□□ -2.42
TPM1P17536 BUL2YML111W 2763 nt-0.06□□□□□ -2.42
TPM1P17536 YOR161W-AYOR161W-A 81 nt-0.06□□□□□ -2.42
TPM1P17536 YKU70YMR284W 1809 nt-0.06□□□□□ -2.42
TPM1P17536 YDR366CYDR366C 399 nt-0.07□□□□□ -2.42
TPM1P17536 YLR154W-FYLR154W-F 141 nt-0.07□□□□□ -2.42
TPM1P17536 SNU13YEL026W 381 nt-0.09□□□□□ -2.42
Retrieved 100 of 7,029 protein–RNA pairs in 66.8 ms