Protein–RNA interactions for Protein: P15179

MSD1, Aspartate--tRNA ligase, mitochondrial, yeastyeast

Known RBP Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSD1P15179 SLX4YLR135W 2247 nt1.87□□□□□ -2.11
MSD1P15179 MYO2YOR326W 4725 nt1.86□□□□□ -2.11
MSD1P15179 YMR247W-AYMR247W-A 144 nt1.86□□□□□ -2.11
MSD1P15179 FIG2YCR089W 4830 nt1.86□□□□□ -2.11
MSD1P15179 RTP1YMR185W 2946 nt1.86□□□□□ -2.11
MSD1P15179 PAA1YDR071C 576 nt1.85□□□□□ -2.11
MSD1P15179 YNL170WYNL170W 396 nt1.84□□□□□ -2.11
MSD1P15179 YBR221W-AYBR221W-A 105 nt1.84□□□□□ -2.11
MSD1P15179 TTI1YKL033W 3117 nt1.84□□□□□ -2.12
MSD1P15179 YJL022WYJL022W 309 nt1.83□□□□□ -2.12
MSD1P15179 CFT1YDR301W 4074 nt1.83□□□□□ -2.12
MSD1P15179 YLR422WYLR422W 5799 nt1.83□□□□□ -2.12
MSD1P15179 PMD1YER132C 5262 nt1.82□□□□□ -2.12
MSD1P15179 SMC4YLR086W 4257 nt1.82□□□□□ -2.12
MSD1P15179 COX12YLR038C 252 nt1.82□□□□□ -2.12
MSD1P15179 HUG1YML058W-A 207 nt1.82□□□□□ -2.12
MSD1P15179 YNL211CYNL211C 261 nt1.82□□□□□ -2.12
MSD1P15179 RPS30BYOR182C 192 nt1.82□□□□□ -2.12
MSD1P15179 CHS1YNL192W 3396 nt1.82□□□□□ -2.12
MSD1P15179 tT(UGU)HtT(UGU)H 72 nt1.81□□□□□ -2.12
MSD1P15179 STF2YGR008C 255 nt1.8□□□□□ -2.12
MSD1P15179 POL5YEL055C 3069 nt1.8□□□□□ -2.12
MSD1P15179 YIL134C-AYIL134C-A 204 nt1.79□□□□□ -2.12
MSD1P15179 YAL067W-AYAL067W-A 228 nt1.79□□□□□ -2.12
MSD1P15179 COA6YMR244C-A 315 nt1.79□□□□□ -2.12
MSD1P15179 YPL044CYPL044C 549 nt1.79□□□□□ -2.12
MSD1P15179 YAR009CYAR009C 3591 nt1.79□□□□□ -2.12
MSD1P15179 PKH3YDR466W 2697 nt1.78□□□□□ -2.12
MSD1P15179 RSM22YKL155C 1887 nt1.78□□□□□ -2.12
MSD1P15179 YGR164WYGR164W 336 nt1.78□□□□□ -2.12
MSD1P15179 SMC1YFL008W 3678 nt1.78□□□□□ -2.13
MSD1P15179 SDH6YDR379C-A 240 nt1.77□□□□□ -2.13
MSD1P15179 YCR038W-AYCR038W-A 126 nt1.76□□□□□ -2.13
MSD1P15179 SNU13YEL026W 381 nt1.76□□□□□ -2.13
MSD1P15179 snR14snR14 160 nt1.76□□□□□ -2.13
MSD1P15179 KAP122YGL016W 3246 nt1.76□□□□□ -2.13
MSD1P15179 MDS3YGL197W 4464 nt1.75□□□□□ -2.13
MSD1P15179 YIL002W-AYIL002W-A 210 nt1.75□□□□□ -2.13
MSD1P15179 MSH3YCR092C 3057 nt1.75□□□□□ -2.13
MSD1P15179 CAT8YMR280C 4302 nt1.74□□□□□ -2.13
MSD1P15179 PRP42YDR235W 1635 nt1.74□□□□□ -2.13
MSD1P15179 CDC31YOR257W 486 nt1.74□□□□□ -2.13
MSD1P15179 SXM1YDR395W 2835 nt1.73□□□□□ -2.13
MSD1P15179 YKL100W-AYKL100W-A 90 nt1.73□□□□□ -2.13
MSD1P15179 BST1YFL025C 3090 nt1.73□□□□□ -2.13
MSD1P15179 MON2YNL297C 4911 nt1.72□□□□□ -2.13
MSD1P15179 STO1YMR125W 2586 nt1.71□□□□□ -2.14
MSD1P15179 SET3YKR029C 2256 nt1.71□□□□□ -2.14
MSD1P15179 BRR2YER172C 6492 nt1.71□□□□□ -2.14
MSD1P15179 CDC25YLR310C 4770 nt1.71□□□□□ -2.14
MSD1P15179 EAF1YDR359C 2949 nt1.71□□□□□ -2.14
MSD1P15179 YOR019WYOR019W 2193 nt1.71□□□□□ -2.14
MSD1P15179 ROM2YLR371W 4071 nt1.71□□□□□ -2.14
MSD1P15179 MEC1YBR136W 7107 nt1.7□□□□□ -2.14
MSD1P15179 VPS15YBR097W 4365 nt1.7□□□□□ -2.14
MSD1P15179 SWI4YER111C 3282 nt1.7□□□□□ -2.14
MSD1P15179 YLR419WYLR419W 4308 nt1.69□□□□□ -2.14
MSD1P15179 YGL123C-AYGL123C-A 231 nt1.69□□□□□ -2.14
MSD1P15179 PRP5YBR237W 2550 nt1.68□□□□□ -2.14
MSD1P15179 CLU1YMR012W 3834 nt1.68□□□□□ -2.14
MSD1P15179 NUP145YGL092W 3954 nt1.67□□□□□ -2.14
MSD1P15179 YHL015W-AYHL015W-A 84 nt1.67□□□□□ -2.14
MSD1P15179 CMC4YMR194C-B 222 nt1.67□□□□□ -2.14
MSD1P15179 YOR102WYOR102W 351 nt1.67□□□□□ -2.14
MSD1P15179 YGR130CYGR130C 2451 nt1.67□□□□□ -2.14
MSD1P15179 WAR1YML076C 2835 nt1.67□□□□□ -2.14
MSD1P15179 CCH1YGR217W 6120 nt1.67□□□□□ -2.14
MSD1P15179 SSK2YNR031C 4740 nt1.66□□□□□ -2.14
MSD1P15179 APL3YBL037W 3078 nt1.65□□□□□ -2.15
MSD1P15179 UTP8YGR128C 2142 nt1.65□□□□□ -2.15
MSD1P15179 NOP9YJL010C 2001 nt1.65□□□□□ -2.15
MSD1P15179 YER053C-AYER053C-A 114 nt1.64□□□□□ -2.15
MSD1P15179 COX5BYIL111W 456 nt1.64□□□□□ -2.15
MSD1P15179 YBR200W-AYBR200W-A 165 nt1.64□□□□□ -2.15
MSD1P15179 AZF1YOR113W 2745 nt1.64□□□□□ -2.15
MSD1P15179 EST2YLR318W 2655 nt1.62□□□□□ -2.15
MSD1P15179 YOR314W-AYOR314W-A 111 nt1.62□□□□□ -2.15
MSD1P15179 BFR2YDR299W 1605 nt1.62□□□□□ -2.15
MSD1P15179 IRA1YBR140C 9279 nt1.61□□□□□ -2.15
MSD1P15179 YLL020CYLL020C 306 nt1.61□□□□□ -2.15
MSD1P15179 YLR282CYLR282C 342 nt1.61□□□□□ -2.15
MSD1P15179 YBL053WYBL053W 375 nt1.61□□□□□ -2.15
MSD1P15179 snR48snR48 113 nt1.61□□□□□ -2.15
MSD1P15179 YOR161W-AYOR161W-A 81 nt1.6□□□□□ -2.15
MSD1P15179 YML002WYML002W 2214 nt1.6□□□□□ -2.15
MSD1P15179 RPL26BYGR034W 384 nt1.59□□□□□ -2.15
MSD1P15179 SEC3YER008C 4011 nt1.58□□□□□ -2.16
MSD1P15179 LAA1YJL207C 6045 nt1.57□□□□□ -2.16
MSD1P15179 MSN5YDR335W 3675 nt1.57□□□□□ -2.16
MSD1P15179 NUP188YML103C 4968 nt1.57□□□□□ -2.16
MSD1P15179 TRM732YMR259C 4263 nt1.57□□□□□ -2.16
MSD1P15179 YGL182CYGL182C 324 nt1.55□□□□□ -2.16
MSD1P15179 YIL020C-AYIL020C-A 339 nt1.55□□□□□ -2.16
MSD1P15179 PIK1YNL267W 3201 nt1.55□□□□□ -2.16
MSD1P15179 snR190snR190 190 nt1.54□□□□□ -2.16
MSD1P15179 IML1YJR138W 4755 nt1.54□□□□□ -2.16
MSD1P15179 GEA2YEL022W 4380 nt1.53□□□□□ -2.16
MSD1P15179 NUP157YER105C 4176 nt1.52□□□□□ -2.17
MSD1P15179 tQ(UUG)E2tQ(UUG)E2 72 nt1.52□□□□□ -2.17
MSD1P15179 YFR012W-AYFR012W-A 87 nt1.51□□□□□ -2.17
Retrieved 100 of 7,029 protein–RNA pairs in 50.1 ms