Protein–RNA interactions for Protein: P07703

RPC40, DNA-directed RNA polymerases I and III subunit RPAC1, yeastyeast

Known RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPC40P07703 ABF2YMR072W 552 nt0.41□□□□□ -2.34
RPC40P07703 SEC8YPR055W 3198 nt0.41□□□□□ -2.34
RPC40P07703 YHR138CYHR138C 345 nt0.4□□□□□ -2.35
RPC40P07703 YMR001C-AYMR001C-A 231 nt0.4□□□□□ -2.35
RPC40P07703 YHL046W-AYHL046W-A 327 nt0.39□□□□□ -2.35
RPC40P07703 YJL120WYJL120W 324 nt0.39□□□□□ -2.35
RPC40P07703 RPS25BYLR333C 327 nt0.39□□□□□ -2.35
RPC40P07703 YPL225WYPL225W 441 nt0.39□□□□□ -2.35
RPC40P07703 YPR160W-AYPR160W-A 81 nt0.39□□□□□ -2.35
RPC40P07703 PET111YMR257C 2403 nt0.38□□□□□ -2.35
RPC40P07703 COX5BYIL111W 456 nt0.37□□□□□ -2.35
RPC40P07703 YAR029WYAR029W 225 nt0.37□□□□□ -2.35
RPC40P07703 TAR1YLR154W-C 375 nt0.37□□□□□ -2.35
RPC40P07703 YAR053WYAR053W 297 nt0.37□□□□□ -2.35
RPC40P07703 YLR399W-AYLR399W-A 105 nt0.37□□□□□ -2.35
RPC40P07703 SGF11YPL047W 300 nt0.37□□□□□ -2.35
RPC40P07703 HAL9YOL089C 3093 nt0.37□□□□□ -2.35
RPC40P07703 FMP27YLR454W 7887 nt0.37□□□□□ -2.35
RPC40P07703 ULP2YIL031W 3105 nt0.37□□□□□ -2.35
RPC40P07703 ESP1YGR098C 4893 nt0.36□□□□□ -2.35
RPC40P07703 SBH1YER087C-B 249 nt0.36□□□□□ -2.35
RPC40P07703 LEE1YPL054W 906 nt0.36□□□□□ -2.35
RPC40P07703 YAL068W-AYAL068W-A 255 nt0.35□□□□□ -2.35
RPC40P07703 HTB2YBL002W 396 nt0.35□□□□□ -2.35
RPC40P07703 PRP5YBR237W 2550 nt0.35□□□□□ -2.35
RPC40P07703 VIK1YPL253C 1944 nt0.34□□□□□ -2.35
RPC40P07703 PAU12YGR294W 363 nt0.34□□□□□ -2.36
RPC40P07703 YHR007C-AYHR007C-A 216 nt0.34□□□□□ -2.36
RPC40P07703 RPL35AYDL191W 363 nt0.33□□□□□ -2.36
RPC40P07703 OST4YDL232W 111 nt0.33□□□□□ -2.36
RPC40P07703 YAL067W-AYAL067W-A 228 nt0.33□□□□□ -2.36
RPC40P07703 YMR321CYMR321C 318 nt0.33□□□□□ -2.36
RPC40P07703 Q0144Q0144 330 nt0.32□□□□□ -2.36
RPC40P07703 YOR293C-AYOR293C-A 150 nt0.32□□□□□ -2.36
RPC40P07703 BIL1YOR304C-A 231 nt0.32□□□□□ -2.36
RPC40P07703 PRP42YDR235W 1635 nt0.31□□□□□ -2.36
RPC40P07703 tF(GAA)BtF(GAA)B 73 nt0.31□□□□□ -2.36
RPC40P07703 tF(GAA)FtF(GAA)F 73 nt0.31□□□□□ -2.36
RPC40P07703 tF(GAA)GtF(GAA)G 73 nt0.31□□□□□ -2.36
RPC40P07703 tF(GAA)H1tF(GAA)H1 73 nt0.31□□□□□ -2.36
RPC40P07703 tF(GAA)H2tF(GAA)H2 73 nt0.31□□□□□ -2.36
RPC40P07703 tF(GAA)MtF(GAA)M 73 nt0.31□□□□□ -2.36
RPC40P07703 tF(GAA)P1tF(GAA)P1 73 nt0.31□□□□□ -2.36
RPC40P07703 tF(GAA)P2tF(GAA)P2 73 nt0.31□□□□□ -2.36
RPC40P07703 YLR154W-FYLR154W-F 141 nt0.31□□□□□ -2.36
RPC40P07703 tW(UCA)QtW(UCA)Q 74 nt0.3□□□□□ -2.36
RPC40P07703 YLR222C-AYLR222C-A 231 nt0.3□□□□□ -2.36
RPC40P07703 YOR192C-BYOR192C-B 5313 nt0.3□□□□□ -2.36
RPC40P07703 YCR018C-AYCR018C-A 255 nt0.29□□□□□ -2.36
RPC40P07703 YDL185C-AYDL185C-A 228 nt0.29□□□□□ -2.36
RPC40P07703 YAL063C-AYAL063C-A 291 nt0.29□□□□□ -2.36
RPC40P07703 YMR307C-AYMR307C-A 195 nt0.29□□□□□ -2.36
RPC40P07703 snR190snR190 190 nt0.29□□□□□ -2.36
RPC40P07703 SSS1YDR086C 243 nt0.28□□□□□ -2.36
RPC40P07703 YKL145W-AYKL145W-A 93 nt0.28□□□□□ -2.36
RPC40P07703 YGR035CYGR035C 351 nt0.26□□□□□ -2.37
RPC40P07703 COG8YML071C 1824 nt0.24□□□□□ -2.37
RPC40P07703 AI1Q0050 2505 nt0.24□□□□□ -2.37
RPC40P07703 YDR048CYDR048C 315 nt0.24□□□□□ -2.37
RPC40P07703 YDR354C-AYDR354C-A 144 nt0.23□□□□□ -2.37
RPC40P07703 YIL115W-AYIL115W-A 372 nt0.23□□□□□ -2.37
RPC40P07703 YOR345CYOR345C 351 nt0.23□□□□□ -2.37
RPC40P07703 YDR157WYDR157W 402 nt0.22□□□□□ -2.37
RPC40P07703 RPS27BYHR021C 249 nt0.22□□□□□ -2.37
RPC40P07703 YOL013W-AYOL013W-A 192 nt0.22□□□□□ -2.37
RPC40P07703 VAR1Q0140 1197 nt0.21□□□□□ -2.38
RPC40P07703 tN(GUU)QtN(GUU)Q 71 nt0.21□□□□□ -2.38
RPC40P07703 YNL054W-BYNL054W-B 5250 nt0.2□□□□□ -2.38
RPC40P07703 YJL026C-AYJL026C-A 222 nt0.2□□□□□ -2.38
RPC40P07703 YKL136WYKL136W 399 nt0.2□□□□□ -2.38
RPC40P07703 YLR282CYLR282C 342 nt0.2□□□□□ -2.38
RPC40P07703 CSE2YNR010W 450 nt0.2□□□□□ -2.38
RPC40P07703 TRS65YGR166W 1683 nt0.2□□□□□ -2.38
RPC40P07703 NNF2YGR089W 2811 nt0.19□□□□□ -2.38
RPC40P07703 BIR1YJR089W 2865 nt0.18□□□□□ -2.38
RPC40P07703 YDR371C-AYDR371C-A 105 nt0.18□□□□□ -2.38
RPC40P07703 YBL100W-BYBL100W-B 5313 nt0.18□□□□□ -2.38
RPC40P07703 YCR022CYCR022C 345 nt0.17□□□□□ -2.38
RPC40P07703 ULI1YFR026C 510 nt0.17□□□□□ -2.38
RPC40P07703 RPS26AYGL189C 360 nt0.17□□□□□ -2.38
RPC40P07703 ORC3YLL004W 1851 nt0.17□□□□□ -2.38
RPC40P07703 QCR9YGR183C 201 nt0.16□□□□□ -2.38
RPC40P07703 YOL014WYOL014W 375 nt0.16□□□□□ -2.38
RPC40P07703 YPR016W-AYPR016W-A 261 nt0.16□□□□□ -2.38
RPC40P07703 COY1YKL179C 2040 nt0.16□□□□□ -2.38
RPC40P07703 YEL020C-BYEL020C-B 198 nt0.15□□□□□ -2.39
RPC40P07703 RCO1YMR075W 2055 nt0.15□□□□□ -2.39
RPC40P07703 YNL146WYNL146W 303 nt0.14□□□□□ -2.39
RPC40P07703 YPR092WYPR092W 306 nt0.14□□□□□ -2.39
RPC40P07703 NIP1YMR309C 2439 nt0.14□□□□□ -2.39
RPC40P07703 HTL1YCR020W-B 237 nt0.12□□□□□ -2.39
RPC40P07703 snR60snR60 104 nt0.12□□□□□ -2.39
RPC40P07703 YGL123C-AYGL123C-A 231 nt0.12□□□□□ -2.39
RPC40P07703 YOR161W-AYOR161W-A 81 nt0.12□□□□□ -2.39
RPC40P07703 YDR118W-AYDR118W-A 117 nt0.11□□□□□ -2.39
RPC40P07703 YJL197C-AYJL197C-A 282 nt0.11□□□□□ -2.39
RPC40P07703 YKL100W-AYKL100W-A 90 nt0.11□□□□□ -2.39
RPC40P07703 BUL2YML111W 2763 nt0.11□□□□□ -2.39
RPC40P07703 YDR102CYDR102C 333 nt0.1□□□□□ -2.39
RPC40P07703 YFL063WYFL063W 456 nt0.1□□□□□ -2.39
Retrieved 100 of 7,029 protein–RNA pairs in 8.1 ms