Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC14.54□□□□□ -0.08
TRGV1A0A0A0MS02 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRGV1A0A0A0MS02 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC14.54□□□□□ -0.08
TRGV1A0A0A0MS02 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRGV1A0A0A0MS02 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRGV1A0A0A0MS02 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRGV1A0A0A0MS02 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRGV1A0A0A0MS02 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRGV1A0A0A0MS02 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
TRGV1A0A0A0MS02 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRGV1A0A0A0MS02 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC14.54□□□□□ -0.08
TRGV1A0A0A0MS02 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC14.54□□□□□ -0.08
TRGV1A0A0A0MS02 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRGV1A0A0A0MS02 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC14.54□□□□□ -0.08
TRGV1A0A0A0MS02 MAZ-216ENST00000616501 991 ntTSL 5 BASIC14.54□□□□□ -0.08
TRGV1A0A0A0MS02 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC14.54□□□□□ -0.08
TRGV1A0A0A0MS02 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC14.54□□□□□ -0.08
TRGV1A0A0A0MS02 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
TRGV1A0A0A0MS02 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRGV1A0A0A0MS02 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRGV1A0A0A0MS02 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
TRGV1A0A0A0MS02 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
TRGV1A0A0A0MS02 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC14.54□□□□□ -0.08
TRGV1A0A0A0MS02 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRGV1A0A0A0MS02 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRGV1A0A0A0MS02 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRGV1A0A0A0MS02 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
TRGV1A0A0A0MS02 SLC25A24-204ENST00000569674 2357 ntBASIC14.54□□□□□ -0.08
TRGV1A0A0A0MS02 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRGV1A0A0A0MS02 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC14.54□□□□□ -0.08
TRGV1A0A0A0MS02 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRGV1A0A0A0MS02 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRGV1A0A0A0MS02 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRGV1A0A0A0MS02 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRGV1A0A0A0MS02 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRGV1A0A0A0MS02 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC14.53□□□□□ -0.08
TRGV1A0A0A0MS02 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRGV1A0A0A0MS02 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC14.53□□□□□ -0.08
TRGV1A0A0A0MS02 STK25-205ENST00000405883 1904 ntTSL 2 BASIC14.53□□□□□ -0.08
TRGV1A0A0A0MS02 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRGV1A0A0A0MS02 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRGV1A0A0A0MS02 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRGV1A0A0A0MS02 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRGV1A0A0A0MS02 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRGV1A0A0A0MS02 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC14.53□□□□□ -0.08
TRGV1A0A0A0MS02 MCRIP2P1-201ENST00000394346 511 ntBASIC14.53□□□□□ -0.08
TRGV1A0A0A0MS02 AC004911.1-201ENST00000416316 871 ntBASIC14.53□□□□□ -0.08
TRGV1A0A0A0MS02 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC14.53□□□□□ -0.08
TRGV1A0A0A0MS02 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC14.53□□□□□ -0.08
TRGV1A0A0A0MS02 IKBKGP1-201ENST00000612193 1073 ntBASIC14.53□□□□□ -0.08
TRGV1A0A0A0MS02 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC14.53□□□□□ -0.08
TRGV1A0A0A0MS02 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC14.53□□□□□ -0.08
TRGV1A0A0A0MS02 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRGV1A0A0A0MS02 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
TRGV1A0A0A0MS02 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRGV1A0A0A0MS02 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC14.53□□□□□ -0.08
TRGV1A0A0A0MS02 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRGV1A0A0A0MS02 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC14.52□□□□□ -0.08
TRGV1A0A0A0MS02 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.08
TRGV1A0A0A0MS02 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
TRGV1A0A0A0MS02 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRGV1A0A0A0MS02 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRGV1A0A0A0MS02 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRGV1A0A0A0MS02 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TRGV1A0A0A0MS02 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRGV1A0A0A0MS02 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
TRGV1A0A0A0MS02 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TRGV1A0A0A0MS02 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
TRGV1A0A0A0MS02 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
TRGV1A0A0A0MS02 AC005181.1-201ENST00000604782 1256 ntBASIC14.52□□□□□ -0.09
TRGV1A0A0A0MS02 AC080038.1-201ENST00000611274 1154 ntBASIC14.52□□□□□ -0.09
TRGV1A0A0A0MS02 PARP1-210ENST00000629232 477 ntTSL 5 BASIC14.52□□□□□ -0.09
TRGV1A0A0A0MS02 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC14.52□□□□□ -0.09
TRGV1A0A0A0MS02 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.09
TRGV1A0A0A0MS02 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC14.52□□□□□ -0.09
TRGV1A0A0A0MS02 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRGV1A0A0A0MS02 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TRGV1A0A0A0MS02 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRGV1A0A0A0MS02 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRGV1A0A0A0MS02 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRGV1A0A0A0MS02 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
TRGV1A0A0A0MS02 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRGV1A0A0A0MS02 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC14.52□□□□□ -0.09
TRGV1A0A0A0MS02 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRGV1A0A0A0MS02 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRGV1A0A0A0MS02 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC14.51□□□□□ -0.09
TRGV1A0A0A0MS02 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC14.51□□□□□ -0.09
TRGV1A0A0A0MS02 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
TRGV1A0A0A0MS02 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRGV1A0A0A0MS02 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC14.51□□□□□ -0.09
TRGV1A0A0A0MS02 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRGV1A0A0A0MS02 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRGV1A0A0A0MS02 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRGV1A0A0A0MS02 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRGV1A0A0A0MS02 AC112907.3-201ENST00000577781 2400 ntBASIC14.51□□□□□ -0.09
TRGV1A0A0A0MS02 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC14.51□□□□□ -0.09
TRGV1A0A0A0MS02 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC14.51□□□□□ -0.09
TRGV1A0A0A0MS02 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRGV1A0A0A0MS02 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRGV1A0A0A0MS02 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms