Protein–RNA interactions for Protein: Q3E827

LSO1, Protein LSO1, yeastyeast

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSO1Q3E827 YBR206WYBR206W 324 nt2.49□□□□□ -2.01
LSO1Q3E827 YNL144CYNL144C 2223 nt2.49□□□□□ -2.01
LSO1Q3E827 SSD1YDR293C 3753 nt2.48□□□□□ -2.01
LSO1Q3E827 CTF4YPR135W 2784 nt2.48□□□□□ -2.01
LSO1Q3E827 YCR038W-AYCR038W-A 126 nt2.47□□□□□ -2.01
LSO1Q3E827 KOG1YHR186C 4674 nt2.46□□□□□ -2.02
LSO1Q3E827 YDL118WYDL118W 381 nt2.46□□□□□ -2.02
LSO1Q3E827 YHR180W-AYHR180W-A 183 nt2.46□□□□□ -2.02
LSO1Q3E827 SCP160YJL080C 3669 nt2.45□□□□□ -2.02
LSO1Q3E827 PAA1YDR071C 576 nt2.45□□□□□ -2.02
LSO1Q3E827 YJL026C-AYJL026C-A 222 nt2.45□□□□□ -2.02
LSO1Q3E827 YOL098CYOL098C 3114 nt2.45□□□□□ -2.02
LSO1Q3E827 YGR109W-BYGR109W-B 4644 nt2.45□□□□□ -2.02
LSO1Q3E827 IST2YBR086C 2841 nt2.44□□□□□ -2.02
LSO1Q3E827 COX12YLR038C 252 nt2.44□□□□□ -2.02
LSO1Q3E827 HIR3YJR140C 4947 nt2.44□□□□□ -2.02
LSO1Q3E827 YPR097WYPR097W 3222 nt2.44□□□□□ -2.02
LSO1Q3E827 SEY1YOR165W 2331 nt2.43□□□□□ -2.02
LSO1Q3E827 YOR296WYOR296W 3870 nt2.43□□□□□ -2.02
LSO1Q3E827 SAP185YJL098W 3177 nt2.43□□□□□ -2.02
LSO1Q3E827 YER053C-AYER053C-A 114 nt2.43□□□□□ -2.02
LSO1Q3E827 TTI1YKL033W 3117 nt2.43□□□□□ -2.02
LSO1Q3E827 NAB6YML117W 3405 nt2.42□□□□□ -2.02
LSO1Q3E827 YBL109WYBL109W 336 nt2.42□□□□□ -2.02
LSO1Q3E827 HER1YOR227W 3741 nt2.42□□□□□ -2.02
LSO1Q3E827 SEC26YDR238C 2922 nt2.41□□□□□ -2.02
LSO1Q3E827 ADR1YDR216W 3972 nt2.41□□□□□ -2.02
LSO1Q3E827 APL1YJR005W 2103 nt2.41□□□□□ -2.02
LSO1Q3E827 SFB2YNL049C 2631 nt2.41□□□□□ -2.02
LSO1Q3E827 RGA1YOR127W 3024 nt2.4□□□□□ -2.03
LSO1Q3E827 YPL150WYPL150W 2706 nt2.4□□□□□ -2.03
LSO1Q3E827 SEC63YOR254C 1992 nt2.39□□□□□ -2.03
LSO1Q3E827 CSF1YLR087C 8877 nt2.38□□□□□ -2.03
LSO1Q3E827 MSH6YDR097C 3729 nt2.38□□□□□ -2.03
LSO1Q3E827 PRP5YBR237W 2550 nt2.38□□□□□ -2.03
LSO1Q3E827 YIL002W-AYIL002W-A 210 nt2.38□□□□□ -2.03
LSO1Q3E827 DBP10YDL031W 2988 nt2.38□□□□□ -2.03
LSO1Q3E827 FKS3YMR306W 5358 nt2.38□□□□□ -2.03
LSO1Q3E827 SPO24YPR036W-A 204 nt2.37□□□□□ -2.03
LSO1Q3E827 YOR019WYOR019W 2193 nt2.37□□□□□ -2.03
LSO1Q3E827 UTP21YLR409C 2820 nt2.36□□□□□ -2.03
LSO1Q3E827 STH1YIL126W 4080 nt2.36□□□□□ -2.03
LSO1Q3E827 YPL216WYPL216W 3309 nt2.36□□□□□ -2.03
LSO1Q3E827 YFR012W-AYFR012W-A 87 nt2.36□□□□□ -2.03
LSO1Q3E827 YNL211CYNL211C 261 nt2.36□□□□□ -2.03
LSO1Q3E827 SVL3YPL032C 2478 nt2.36□□□□□ -2.03
LSO1Q3E827 TDA9YML081W 3756 nt2.34□□□□□ -2.03
LSO1Q3E827 YDL206WYDL206W 2289 nt2.34□□□□□ -2.03
LSO1Q3E827 ARP8YOR141C 2646 nt2.34□□□□□ -2.03
LSO1Q3E827 YGL063C-AYGL063C-A 150 nt2.34□□□□□ -2.03
LSO1Q3E827 tL(UAA)QtL(UAA)Q 85 nt2.34□□□□□ -2.03
LSO1Q3E827 CDC31YOR257W 486 nt2.34□□□□□ -2.03
LSO1Q3E827 GCN2YDR283C 4980 nt2.34□□□□□ -2.03
LSO1Q3E827 BNI1YNL271C 5862 nt2.34□□□□□ -2.04
LSO1Q3E827 PDR11YIL013C 4236 nt2.33□□□□□ -2.04
LSO1Q3E827 IRC8YJL051W 2469 nt2.33□□□□□ -2.04
LSO1Q3E827 MYO4YAL029C 4416 nt2.33□□□□□ -2.04
LSO1Q3E827 YIL071W-AYIL071W-A 477 nt2.32□□□□□ -2.04
LSO1Q3E827 YBR099CYBR099C 384 nt2.32□□□□□ -2.04
LSO1Q3E827 MDS3YGL197W 4464 nt2.31□□□□□ -2.04
LSO1Q3E827 YDR544CYDR544C 429 nt2.31□□□□□ -2.04
LSO1Q3E827 CMC4YMR194C-B 222 nt2.31□□□□□ -2.04
LSO1Q3E827 HSL1YKL101W 4557 nt2.31□□□□□ -2.04
LSO1Q3E827 VPS13YLL040C 9435 nt2.3□□□□□ -2.04
LSO1Q3E827 YCR095W-AYCR095W-A 159 nt2.3□□□□□ -2.04
LSO1Q3E827 TFB5YDR079C-A 219 nt2.3□□□□□ -2.04
LSO1Q3E827 YER172C-AYER172C-A 381 nt2.3□□□□□ -2.04
LSO1Q3E827 YAL067W-AYAL067W-A 228 nt2.3□□□□□ -2.04
LSO1Q3E827 DNF1YER166W 4716 nt2.29□□□□□ -2.04
LSO1Q3E827 TRM3YDL112W 4311 nt2.29□□□□□ -2.04
LSO1Q3E827 PMP2YEL017C-A 132 nt2.29□□□□□ -2.04
LSO1Q3E827 STE11YLR362W 2154 nt2.29□□□□□ -2.04
LSO1Q3E827 YLL054CYLL054C 2532 nt2.28□□□□□ -2.04
LSO1Q3E827 YMR326CYMR326C 309 nt2.28□□□□□ -2.04
LSO1Q3E827 NUT1YGL151W 3399 nt2.28□□□□□ -2.04
LSO1Q3E827 USO1YDL058W 5373 nt2.28□□□□□ -2.04
LSO1Q3E827 RAD50YNL250W 3939 nt2.28□□□□□ -2.04
LSO1Q3E827 CHS6YJL099W 2241 nt2.27□□□□□ -2.05
LSO1Q3E827 PDR1YGL013C 3207 nt2.27□□□□□ -2.05
LSO1Q3E827 YOR055WYOR055W 435 nt2.27□□□□□ -2.05
LSO1Q3E827 UTP8YGR128C 2142 nt2.27□□□□□ -2.05
LSO1Q3E827 YJR039WYJR039W 3366 nt2.27□□□□□ -2.05
LSO1Q3E827 LHS1YKL073W 2646 nt2.26□□□□□ -2.05
LSO1Q3E827 UBP2YOR124C 3819 nt2.26□□□□□ -2.05
LSO1Q3E827 UBR2YLR024C 5619 nt2.26□□□□□ -2.05
LSO1Q3E827 UFD2YDL190C 2886 nt2.26□□□□□ -2.05
LSO1Q3E827 EMC5YIL027C 426 nt2.25□□□□□ -2.05
LSO1Q3E827 RSM22YKL155C 1887 nt2.24□□□□□ -2.05
LSO1Q3E827 OST4YDL232W 111 nt2.24□□□□□ -2.05
LSO1Q3E827 YGL123C-AYGL123C-A 231 nt2.24□□□□□ -2.05
LSO1Q3E827 YGL182CYGL182C 324 nt2.24□□□□□ -2.05
LSO1Q3E827 TOR2YKL203C 7425 nt2.24□□□□□ -2.05
LSO1Q3E827 SIR4YDR227W 4077 nt2.23□□□□□ -2.05
LSO1Q3E827 MMS4YBR098W 2076 nt2.23□□□□□ -2.05
LSO1Q3E827 tW(CCA)G1tW(CCA)G1 72 nt2.23□□□□□ -2.05
LSO1Q3E827 tW(CCA)G2tW(CCA)G2 72 nt2.23□□□□□ -2.05
LSO1Q3E827 tW(CCA)JtW(CCA)J 72 nt2.23□□□□□ -2.05
LSO1Q3E827 tW(CCA)KtW(CCA)K 72 nt2.23□□□□□ -2.05
LSO1Q3E827 tW(CCA)MtW(CCA)M 72 nt2.23□□□□□ -2.05
LSO1Q3E827 tW(CCA)PtW(CCA)P 72 nt2.23□□□□□ -2.05
Retrieved 100 of 7,029 protein–RNA pairs in 47.2 ms