Protein–RNA interactions for Protein: Q04121

NHX1, Endosomal/prevacuolar sodium/hydrogen exchanger, yeastyeast

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NHX1Q04121 YLL007CYLL007C 1998 nt1.99□□□□□ -2.09
NHX1Q04121 SEC31YDL195W 3822 nt1.98□□□□□ -2.09
NHX1Q04121 UTP21YLR409C 2820 nt1.98□□□□□ -2.09
NHX1Q04121 YJL182CYJL182C 318 nt1.98□□□□□ -2.09
NHX1Q04121 UBP2YOR124C 3819 nt1.98□□□□□ -2.09
NHX1Q04121 MGA2YIR033W 3342 nt1.98□□□□□ -2.09
NHX1Q04121 NEO1YIL048W 3456 nt1.96□□□□□ -2.1
NHX1Q04121 YLR035C-AYLR035C-A 3468 nt1.96□□□□□ -2.1
NHX1Q04121 SLI15YBR156C 2097 nt1.95□□□□□ -2.1
NHX1Q04121 YJR039WYJR039W 3366 nt1.95□□□□□ -2.1
NHX1Q04121 ECM12YHR021W-A 456 nt1.95□□□□□ -2.1
NHX1Q04121 ALK1YGL021W 2283 nt1.94□□□□□ -2.1
NHX1Q04121 YDR521WYDR521W 336 nt1.94□□□□□ -2.1
NHX1Q04121 YEL014CYEL014C 306 nt1.94□□□□□ -2.1
NHX1Q04121 YLR466C-BYLR466C-B 117 nt1.94□□□□□ -2.1
NHX1Q04121 YNL097C-BYNL097C-B 123 nt1.94□□□□□ -2.1
NHX1Q04121 COG4YPR105C 2586 nt1.94□□□□□ -2.1
NHX1Q04121 PAU3YCR104W 375 nt1.93□□□□□ -2.1
NHX1Q04121 YLR294CYLR294C 330 nt1.93□□□□□ -2.1
NHX1Q04121 YOR072W-BYOR072W-B 162 nt1.93□□□□□ -2.1
NHX1Q04121 SPO24YPR036W-A 204 nt1.93□□□□□ -2.1
NHX1Q04121 UBR2YLR024C 5619 nt1.92□□□□□ -2.1
NHX1Q04121 EMC5YIL027C 426 nt1.92□□□□□ -2.1
NHX1Q04121 TBS1YBR150C 3285 nt1.92□□□□□ -2.1
NHX1Q04121 PKH2YOL100W 3246 nt1.92□□□□□ -2.1
NHX1Q04121 NUT1YGL151W 3399 nt1.91□□□□□ -2.1
NHX1Q04121 PBY1YBR094W 2262 nt1.91□□□□□ -2.1
NHX1Q04121 YGR151CYGR151C 336 nt1.91□□□□□ -2.1
NHX1Q04121 LHS1YKL073W 2646 nt1.9□□□□□ -2.1
NHX1Q04121 HSL1YKL101W 4557 nt1.9□□□□□ -2.1
NHX1Q04121 IFH1YLR223C 3258 nt1.9□□□□□ -2.11
NHX1Q04121 COF1YLL050C 432 nt1.89□□□□□ -2.11
NHX1Q04121 TMA7YLR262C-A 195 nt1.89□□□□□ -2.11
NHX1Q04121 PIP2YOR363C 2991 nt1.89□□□□□ -2.11
NHX1Q04121 YBR206WYBR206W 324 nt1.89□□□□□ -2.11
NHX1Q04121 YJL150WYJL150W 303 nt1.88□□□□□ -2.11
NHX1Q04121 YBR131C-AYBR131C-A 90 nt1.88□□□□□ -2.11
NHX1Q04121 AHC1YOR023C 1701 nt1.88□□□□□ -2.11
NHX1Q04121 GCN2YDR283C 4980 nt1.88□□□□□ -2.11
NHX1Q04121 SKI3YPR189W 4299 nt1.87□□□□□ -2.11
NHX1Q04121 FAB1YFR019W 6837 nt1.87□□□□□ -2.11
NHX1Q04121 ULI1YFR026C 510 nt1.87□□□□□ -2.11
NHX1Q04121 YGL217CYGL217C 342 nt1.87□□□□□ -2.11
NHX1Q04121 YLL019W-AYLL019W-A 93 nt1.87□□□□□ -2.11
NHX1Q04121 YLR140WYLR140W 327 nt1.87□□□□□ -2.11
NHX1Q04121 TRM3YDL112W 4311 nt1.87□□□□□ -2.11
NHX1Q04121 KCS1YDR017C 3153 nt1.86□□□□□ -2.11
NHX1Q04121 LRE1YCL051W 1752 nt1.86□□□□□ -2.11
NHX1Q04121 RAD50YNL250W 3939 nt1.86□□□□□ -2.11
NHX1Q04121 ADR1YDR216W 3972 nt1.85□□□□□ -2.11
NHX1Q04121 YLR342W-AYLR342W-A 174 nt1.85□□□□□ -2.11
NHX1Q04121 YMR272W-BYMR272W-B 108 nt1.85□□□□□ -2.11
NHX1Q04121 snR46snR46 197 nt1.85□□□□□ -2.11
NHX1Q04121 AIM44YPL158C 2277 nt1.84□□□□□ -2.11
NHX1Q04121 NCA2YPR155C 1851 nt1.84□□□□□ -2.11
NHX1Q04121 YMR045CYMR045C 5268 nt1.84□□□□□ -2.11
NHX1Q04121 YDL196WYDL196W 330 nt1.84□□□□□ -2.11
NHX1Q04121 YHR210CYHR210C 1026 nt1.84□□□□□ -2.11
NHX1Q04121 SLD3YGL113W 2007 nt1.84□□□□□ -2.12
NHX1Q04121 ALY2YJL084C 3141 nt1.83□□□□□ -2.12
NHX1Q04121 UFD2YDL190C 2886 nt1.83□□□□□ -2.12
NHX1Q04121 YGR109W-BYGR109W-B 4644 nt1.82□□□□□ -2.12
NHX1Q04121 FIG4YNL325C 2640 nt1.82□□□□□ -2.12
NHX1Q04121 KIP1YBL063W 3336 nt1.81□□□□□ -2.12
NHX1Q04121 YOR345CYOR345C 351 nt1.81□□□□□ -2.12
NHX1Q04121 REV3YPL167C 4515 nt1.81□□□□□ -2.12
NHX1Q04121 PRP39YML046W 1890 nt1.81□□□□□ -2.12
NHX1Q04121 YCS4YLR272C 3531 nt1.81□□□□□ -2.12
NHX1Q04121 PEP1YBL017C 4740 nt1.81□□□□□ -2.12
NHX1Q04121 YLR419WYLR419W 4308 nt1.81□□□□□ -2.12
NHX1Q04121 YDL206WYDL206W 2289 nt1.8□□□□□ -2.12
NHX1Q04121 SLX4YLR135W 2247 nt1.8□□□□□ -2.12
NHX1Q04121 YJL022WYJL022W 309 nt1.79□□□□□ -2.12
NHX1Q04121 BPH1YCR032W 6504 nt1.79□□□□□ -2.12
NHX1Q04121 CTF4YPR135W 2784 nt1.78□□□□□ -2.12
NHX1Q04121 SMC4YLR086W 4257 nt1.78□□□□□ -2.12
NHX1Q04121 RTP1YMR185W 2946 nt1.78□□□□□ -2.12
NHX1Q04121 PAN2YGL094C 3348 nt1.78□□□□□ -2.13
NHX1Q04121 TRS65YGR166W 1683 nt1.77□□□□□ -2.13
NHX1Q04121 SBE22YHR103W 2559 nt1.77□□□□□ -2.13
NHX1Q04121 YDR354C-AYDR354C-A 144 nt1.77□□□□□ -2.13
NHX1Q04121 tT(UGU)HtT(UGU)H 72 nt1.77□□□□□ -2.13
NHX1Q04121 MMS4YBR098W 2076 nt1.77□□□□□ -2.13
NHX1Q04121 YHR214C-BYHR214C-B 5382 nt1.77□□□□□ -2.13
NHX1Q04121 MON2YNL297C 4911 nt1.77□□□□□ -2.13
NHX1Q04121 YLL054CYLL054C 2532 nt1.76□□□□□ -2.13
NHX1Q04121 YNL338WYNL338W 159 nt1.76□□□□□ -2.13
NHX1Q04121 RPL33BYOR234C 324 nt1.76□□□□□ -2.13
NHX1Q04121 IRC20YLR247C 4671 nt1.76□□□□□ -2.13
NHX1Q04121 PKH3YDR466W 2697 nt1.75□□□□□ -2.13
NHX1Q04121 YJL026C-AYJL026C-A 222 nt1.75□□□□□ -2.13
NHX1Q04121 snR52snR52 92 nt1.75□□□□□ -2.13
NHX1Q04121 HAL9YOL089C 3093 nt1.75□□□□□ -2.13
NHX1Q04121 snR14snR14 160 nt1.74□□□□□ -2.13
NHX1Q04121 KAP122YGL016W 3246 nt1.74□□□□□ -2.13
NHX1Q04121 MDS3YGL197W 4464 nt1.73□□□□□ -2.13
NHX1Q04121 CFT1YDR301W 4074 nt1.72□□□□□ -2.13
NHX1Q04121 APL1YJR005W 2103 nt1.7□□□□□ -2.14
NHX1Q04121 YAR009CYAR009C 3591 nt1.7□□□□□ -2.14
NHX1Q04121 COY1YKL179C 2040 nt1.7□□□□□ -2.14
Retrieved 100 of 7,029 protein–RNA pairs in 87.1 ms