Protein–RNA interactions for Protein: Q04062

RPN9, 26S proteasome regulatory subunit RPN9, yeastyeast

Known RBP Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN9Q04062 YHR175W-AYHR175W-A 150 nt1.18□□□□□ -2.22
RPN9Q04062 YBL008W-AYBL008W-A 240 nt1.18□□□□□ -2.22
RPN9Q04062 YPR197CYPR197C 564 nt1.18□□□□□ -2.22
RPN9Q04062 MMS4YBR098W 2076 nt1.18□□□□□ -2.22
RPN9Q04062 YNL284C-BYNL284C-B 5268 nt1.18□□□□□ -2.22
RPN9Q04062 ALY2YJL084C 3141 nt1.18□□□□□ -2.22
RPN9Q04062 SET3YKR029C 2256 nt1.17□□□□□ -2.22
RPN9Q04062 YHL046W-AYHL046W-A 327 nt1.17□□□□□ -2.22
RPN9Q04062 STO1YMR125W 2586 nt1.17□□□□□ -2.22
RPN9Q04062 STB6YKL072W 2301 nt1.17□□□□□ -2.22
RPN9Q04062 TTI1YKL033W 3117 nt1.17□□□□□ -2.22
RPN9Q04062 CLU1YMR012W 3834 nt1.17□□□□□ -2.22
RPN9Q04062 YDL206WYDL206W 2289 nt1.16□□□□□ -2.22
RPN9Q04062 YAR029WYAR029W 225 nt1.16□□□□□ -2.22
RPN9Q04062 HTB2YBL002W 396 nt1.16□□□□□ -2.22
RPN9Q04062 CUL3YGR003W 2235 nt1.15□□□□□ -2.23
RPN9Q04062 YDR169C-AYDR169C-A 150 nt1.15□□□□□ -2.23
RPN9Q04062 GPG1YGL121C 381 nt1.15□□□□□ -2.23
RPN9Q04062 SPO75YLL005C 2607 nt1.15□□□□□ -2.23
RPN9Q04062 APL1YJR005W 2103 nt1.15□□□□□ -2.23
RPN9Q04062 IML1YJR138W 4755 nt1.15□□□□□ -2.23
RPN9Q04062 YIR044CYIR044C 186 nt1.14□□□□□ -2.23
RPN9Q04062 YJR011CYJR011C 786 nt1.14□□□□□ -2.23
RPN9Q04062 YAF9YNL107W 681 nt1.14□□□□□ -2.23
RPN9Q04062 BUD3YCL014W 4911 nt1.14□□□□□ -2.23
RPN9Q04062 NIP100YPL174C 2607 nt1.14□□□□□ -2.23
RPN9Q04062 SIP4YJL089W 2490 nt1.13□□□□□ -2.23
RPN9Q04062 CDC39YCR093W 6327 nt1.13□□□□□ -2.23
RPN9Q04062 YDR048CYDR048C 315 nt1.13□□□□□ -2.23
RPN9Q04062 PDE2YOR360C 1581 nt1.13□□□□□ -2.23
RPN9Q04062 RPL34BYIL052C 366 nt1.12□□□□□ -2.23
RPN9Q04062 YLL007CYLL007C 1998 nt1.12□□□□□ -2.23
RPN9Q04062 tR(ACG)Q2tR(ACG)Q2 74 nt1.11□□□□□ -2.23
RPN9Q04062 YHR007C-AYHR007C-A 216 nt1.11□□□□□ -2.23
RPN9Q04062 YPL038W-AYPL038W-A 192 nt1.11□□□□□ -2.23
RPN9Q04062 YBR200W-AYBR200W-A 165 nt1.11□□□□□ -2.23
RPN9Q04062 IFH1YLR223C 3258 nt1.11□□□□□ -2.23
RPN9Q04062 GEA2YEL022W 4380 nt1.1□□□□□ -2.23
RPN9Q04062 YAR009CYAR009C 3591 nt1.1□□□□□ -2.23
RPN9Q04062 WAR1YML076C 2835 nt1.09□□□□□ -2.23
RPN9Q04062 NST1YNL091W 3723 nt1.09□□□□□ -2.23
RPN9Q04062 PTP2YOR208W 2253 nt1.09□□□□□ -2.24
RPN9Q04062 TAR1YLR154W-C 375 nt1.08□□□□□ -2.24
RPN9Q04062 YCK3YER123W 1575 nt1.08□□□□□ -2.24
RPN9Q04062 OST1YJL002C 1431 nt1.07□□□□□ -2.24
RPN9Q04062 NUP157YER105C 4176 nt1.07□□□□□ -2.24
RPN9Q04062 SPT7YBR081C 3999 nt1.07□□□□□ -2.24
RPN9Q04062 SMC1YFL008W 3678 nt1.07□□□□□ -2.24
RPN9Q04062 YDR102CYDR102C 333 nt1.06□□□□□ -2.24
RPN9Q04062 YDR521WYDR521W 336 nt1.06□□□□□ -2.24
RPN9Q04062 YDL240C-AYDL240C-A 138 nt1.05□□□□□ -2.24
RPN9Q04062 YBR206WYBR206W 324 nt1.05□□□□□ -2.24
RPN9Q04062 ROM2YLR371W 4071 nt1.04□□□□□ -2.24
RPN9Q04062 PAN2YGL094C 3348 nt1.04□□□□□ -2.24
RPN9Q04062 VAM6YDL077C 3150 nt1.03□□□□□ -2.24
RPN9Q04062 YJR029WYJR029W 5268 nt1.02□□□□□ -2.25
RPN9Q04062 YPR137C-BYPR137C-B 5268 nt1.02□□□□□ -2.25
RPN9Q04062 HMRA2YCR096C 360 nt1.02□□□□□ -2.25
RPN9Q04062 SSS1YDR086C 243 nt1.02□□□□□ -2.25
RPN9Q04062 ECM12YHR021W-A 456 nt1.02□□□□□ -2.25
RPN9Q04062 YPL225WYPL225W 441 nt1.02□□□□□ -2.25
RPN9Q04062 snR36snR36 182 nt1.02□□□□□ -2.25
RPN9Q04062 ATP6Q0085 780 nt1.01□□□□□ -2.25
RPN9Q04062 YBR064WYBR064W 429 nt1.01□□□□□ -2.25
RPN9Q04062 DBP6YNR038W 1890 nt1.01□□□□□ -2.25
RPN9Q04062 SCC2YDR180W 4482 nt1□□□□□ -2.25
RPN9Q04062 KAP120YPL125W 3099 nt0.99□□□□□ -2.25
RPN9Q04062 RPS25BYLR333C 327 nt0.99□□□□□ -2.25
RPN9Q04062 YHL042WYHL042W 453 nt0.98□□□□□ -2.25
RPN9Q04062 YIL115W-AYIL115W-A 372 nt0.98□□□□□ -2.25
RPN9Q04062 YOR011W-AYOR011W-A 207 nt0.98□□□□□ -2.25
RPN9Q04062 NHP2YDL208W 471 nt0.97□□□□□ -2.25
RPN9Q04062 OLI1Q0130 231 nt0.97□□□□□ -2.25
RPN9Q04062 EMT1tM(CAU)D 73 nt0.97□□□□□ -2.25
RPN9Q04062 EMT5tM(CAU)J1 73 nt0.97□□□□□ -2.25
RPN9Q04062 EMT3tM(CAU)J2 73 nt0.97□□□□□ -2.25
RPN9Q04062 EMT4tM(CAU)M 73 nt0.97□□□□□ -2.25
RPN9Q04062 EMT2tM(CAU)O2 73 nt0.97□□□□□ -2.25
RPN9Q04062 SPO21YOL091W 1830 nt0.96□□□□□ -2.26
RPN9Q04062 snR60snR60 104 nt0.96□□□□□ -2.26
RPN9Q04062 YDL196WYDL196W 330 nt0.96□□□□□ -2.26
RPN9Q04062 YDR344CYDR344C 444 nt0.96□□□□□ -2.26
RPN9Q04062 YFL032WYFL032W 321 nt0.96□□□□□ -2.26
RPN9Q04062 YJL120WYJL120W 324 nt0.96□□□□□ -2.26
RPN9Q04062 MCM10YIL150C 1716 nt0.95□□□□□ -2.26
RPN9Q04062 HTL1YCR020W-B 237 nt0.94□□□□□ -2.26
RPN9Q04062 YDR413CYDR413C 576 nt0.94□□□□□ -2.26
RPN9Q04062 YIL032CYIL032C 357 nt0.94□□□□□ -2.26
RPN9Q04062 YKL136WYKL136W 399 nt0.94□□□□□ -2.26
RPN9Q04062 BEM2YER155C 6504 nt0.94□□□□□ -2.26
RPN9Q04062 YDR183C-AYDR183C-A 258 nt0.93□□□□□ -2.26
RPN9Q04062 YDR524W-CYDR524W-C 90 nt0.93□□□□□ -2.26
RPN9Q04062 INA22YIR024C 651 nt0.93□□□□□ -2.26
RPN9Q04062 YKL118WYKL118W 312 nt0.93□□□□□ -2.26
RPN9Q04062 YGL149WYGL149W 306 nt0.92□□□□□ -2.26
RPN9Q04062 YMR193C-AYMR193C-A 387 nt0.92□□□□□ -2.26
RPN9Q04062 SGF11YPL047W 300 nt0.92□□□□□ -2.26
RPN9Q04062 COG8YML071C 1824 nt0.92□□□□□ -2.26
RPN9Q04062 YFL063WYFL063W 456 nt0.91□□□□□ -2.26
RPN9Q04062 STF2YGR008C 255 nt0.91□□□□□ -2.26
Retrieved 100 of 7,029 protein–RNA pairs in 43 ms