Protein–RNA interactions for Protein: Q02630

NUP116, Nucleoporin NUP116/NSP116, yeastyeast

Predictions only

Length 1,113 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NUP116Q02630 CDC36YDL165W 576 nt1.25□□□□□ -2.21
NUP116Q02630 YIR044CYIR044C 186 nt1.25□□□□□ -2.21
NUP116Q02630 AHC1YOR023C 1701 nt1.25□□□□□ -2.21
NUP116Q02630 VPS54YDR027C 2670 nt1.25□□□□□ -2.21
NUP116Q02630 SLI15YBR156C 2097 nt1.25□□□□□ -2.21
NUP116Q02630 RSM22YKL155C 1887 nt1.24□□□□□ -2.21
NUP116Q02630 TRM732YMR259C 4263 nt1.24□□□□□ -2.21
NUP116Q02630 ALY2YJL084C 3141 nt1.24□□□□□ -2.21
NUP116Q02630 YMR031W-AYMR031W-A 327 nt1.24□□□□□ -2.21
NUP116Q02630 YMR193C-AYMR193C-A 387 nt1.24□□□□□ -2.21
NUP116Q02630 MSH3YCR092C 3057 nt1.24□□□□□ -2.21
NUP116Q02630 EST2YLR318W 2655 nt1.24□□□□□ -2.21
NUP116Q02630 RAD9YDR217C 3930 nt1.23□□□□□ -2.21
NUP116Q02630 YDL211CYDL211C 1119 nt1.23□□□□□ -2.21
NUP116Q02630 YDR344CYDR344C 444 nt1.23□□□□□ -2.21
NUP116Q02630 YGL149WYGL149W 306 nt1.23□□□□□ -2.21
NUP116Q02630 RPL34BYIL052C 366 nt1.23□□□□□ -2.21
NUP116Q02630 CDC25YLR310C 4770 nt1.22□□□□□ -2.21
NUP116Q02630 YCK3YER123W 1575 nt1.22□□□□□ -2.21
NUP116Q02630 YLL054CYLL054C 2532 nt1.22□□□□□ -2.21
NUP116Q02630 LCD1YDR499W 2244 nt1.21□□□□□ -2.21
NUP116Q02630 LAA1YJL207C 6045 nt1.21□□□□□ -2.21
NUP116Q02630 snR65snR65 100 nt1.21□□□□□ -2.22
NUP116Q02630 tF(GAA)BtF(GAA)B 73 nt1.21□□□□□ -2.22
NUP116Q02630 tF(GAA)FtF(GAA)F 73 nt1.21□□□□□ -2.22
NUP116Q02630 tF(GAA)GtF(GAA)G 73 nt1.21□□□□□ -2.22
NUP116Q02630 tF(GAA)H1tF(GAA)H1 73 nt1.21□□□□□ -2.22
NUP116Q02630 tF(GAA)H2tF(GAA)H2 73 nt1.21□□□□□ -2.22
NUP116Q02630 tF(GAA)MtF(GAA)M 73 nt1.21□□□□□ -2.22
NUP116Q02630 tF(GAA)P1tF(GAA)P1 73 nt1.21□□□□□ -2.22
NUP116Q02630 tF(GAA)P2tF(GAA)P2 73 nt1.21□□□□□ -2.22
NUP116Q02630 YBL008W-AYBL008W-A 240 nt1.21□□□□□ -2.22
NUP116Q02630 YOR161W-BYOR161W-B 261 nt1.21□□□□□ -2.22
NUP116Q02630 snR14snR14 160 nt1.21□□□□□ -2.22
NUP116Q02630 IFH1YLR223C 3258 nt1.21□□□□□ -2.22
NUP116Q02630 AZF1YOR113W 2745 nt1.2□□□□□ -2.22
NUP116Q02630 SSS1YDR086C 243 nt1.2□□□□□ -2.22
NUP116Q02630 YIL032CYIL032C 357 nt1.2□□□□□ -2.22
NUP116Q02630 YIL115W-AYIL115W-A 372 nt1.2□□□□□ -2.22
NUP116Q02630 INA22YIR024C 651 nt1.2□□□□□ -2.22
NUP116Q02630 RRT15YLR162W-A 189 nt1.2□□□□□ -2.22
NUP116Q02630 SPO75YLL005C 2607 nt1.2□□□□□ -2.22
NUP116Q02630 SPT21YMR179W 2277 nt1.2□□□□□ -2.22
NUP116Q02630 CUL3YGR003W 2235 nt1.2□□□□□ -2.22
NUP116Q02630 TTI1YKL033W 3117 nt1.19□□□□□ -2.22
NUP116Q02630 PTP2YOR208W 2253 nt1.18□□□□□ -2.22
NUP116Q02630 YDR521WYDR521W 336 nt1.18□□□□□ -2.22
NUP116Q02630 tH(GUG)E1tH(GUG)E1 72 nt1.18□□□□□ -2.22
NUP116Q02630 tH(GUG)E2tH(GUG)E2 72 nt1.18□□□□□ -2.22
NUP116Q02630 tH(GUG)G1tH(GUG)G1 72 nt1.18□□□□□ -2.22
NUP116Q02630 tH(GUG)G2tH(GUG)G2 72 nt1.18□□□□□ -2.22
NUP116Q02630 tH(GUG)HtH(GUG)H 72 nt1.18□□□□□ -2.22
NUP116Q02630 tH(GUG)KtH(GUG)K 72 nt1.18□□□□□ -2.22
NUP116Q02630 tH(GUG)MtH(GUG)M 72 nt1.18□□□□□ -2.22
NUP116Q02630 YIL020C-AYIL020C-A 339 nt1.18□□□□□ -2.22
NUP116Q02630 MSN5YDR335W 3675 nt1.18□□□□□ -2.22
NUP116Q02630 PKH2YOL100W 3246 nt1.18□□□□□ -2.22
NUP116Q02630 MDS3YGL197W 4464 nt1.18□□□□□ -2.22
NUP116Q02630 SWI4YER111C 3282 nt1.18□□□□□ -2.22
NUP116Q02630 YLL007CYLL007C 1998 nt1.17□□□□□ -2.22
NUP116Q02630 YHL042WYHL042W 453 nt1.17□□□□□ -2.22
NUP116Q02630 YOR231C-AYOR231C-A 201 nt1.17□□□□□ -2.22
NUP116Q02630 YPR010C-AYPR010C-A 219 nt1.17□□□□□ -2.22
NUP116Q02630 MMS4YBR098W 2076 nt1.16□□□□□ -2.22
NUP116Q02630 snR60snR60 104 nt1.16□□□□□ -2.22
NUP116Q02630 HMRA2YCR096C 360 nt1.16□□□□□ -2.22
NUP116Q02630 ALG13YGL047W 609 nt1.16□□□□□ -2.22
NUP116Q02630 YJL120WYJL120W 324 nt1.16□□□□□ -2.22
NUP116Q02630 PAN2YGL094C 3348 nt1.16□□□□□ -2.22
NUP116Q02630 DOP1YDR141C 5097 nt1.15□□□□□ -2.23
NUP116Q02630 GPG1YGL121C 381 nt1.15□□□□□ -2.23
NUP116Q02630 YNL277W-AYNL277W-A 189 nt1.15□□□□□ -2.23
NUP116Q02630 AIM44YPL158C 2277 nt1.15□□□□□ -2.23
NUP116Q02630 SLD3YGL113W 2007 nt1.15□□□□□ -2.23
NUP116Q02630 COG8YML071C 1824 nt1.15□□□□□ -2.23
NUP116Q02630 APL3YBL037W 3078 nt1.14□□□□□ -2.23
NUP116Q02630 YDL206WYDL206W 2289 nt1.14□□□□□ -2.23
NUP116Q02630 NST1YNL091W 3723 nt1.14□□□□□ -2.23
NUP116Q02630 FIG4YNL325C 2640 nt1.14□□□□□ -2.23
NUP116Q02630 RPS25BYLR333C 327 nt1.14□□□□□ -2.23
NUP116Q02630 RPL33BYOR234C 324 nt1.14□□□□□ -2.23
NUP116Q02630 NUP188YML103C 4968 nt1.14□□□□□ -2.23
NUP116Q02630 IML1YJR138W 4755 nt1.14□□□□□ -2.23
NUP116Q02630 VIK1YPL253C 1944 nt1.13□□□□□ -2.23
NUP116Q02630 SPO21YOL091W 1830 nt1.13□□□□□ -2.23
NUP116Q02630 tV(UAC)BtV(UAC)B 74 nt1.13□□□□□ -2.23
NUP116Q02630 tV(UAC)DtV(UAC)D 74 nt1.13□□□□□ -2.23
NUP116Q02630 YMR321CYMR321C 318 nt1.13□□□□□ -2.23
NUP116Q02630 YBR206WYBR206W 324 nt1.13□□□□□ -2.23
NUP116Q02630 SET3YKR029C 2256 nt1.13□□□□□ -2.23
NUP116Q02630 YER181CYER181C 324 nt1.12□□□□□ -2.23
NUP116Q02630 YJR029WYJR029W 5268 nt1.12□□□□□ -2.23
NUP116Q02630 YPR137C-BYPR137C-B 5268 nt1.12□□□□□ -2.23
NUP116Q02630 CSE2YNR010W 450 nt1.11□□□□□ -2.23
NUP116Q02630 YBR221W-AYBR221W-A 105 nt1.11□□□□□ -2.23
NUP116Q02630 RAD61YDR014W 1944 nt1.11□□□□□ -2.23
NUP116Q02630 YAR009CYAR009C 3591 nt1.1□□□□□ -2.23
NUP116Q02630 PDE2YOR360C 1581 nt1.1□□□□□ -2.23
NUP116Q02630 YLL020CYLL020C 306 nt1.1□□□□□ -2.23
NUP116Q02630 STO1YMR125W 2586 nt1.1□□□□□ -2.23
Retrieved 100 of 7,029 protein–RNA pairs in 66.3 ms