Protein–RNA interactions for Protein: P53044

UFD1, Ubiquitin fusion degradation protein 1, yeastyeast

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD1P53044 YPL261CYPL261C 309 nt0.91□□□□□ -2.26
UFD1P53044 RAD34YDR314C 2079 nt0.91□□□□□ -2.26
UFD1P53044 ROM2YLR371W 4071 nt0.9□□□□□ -2.26
UFD1P53044 tW(UCA)QtW(UCA)Q 74 nt0.9□□□□□ -2.27
UFD1P53044 DOP1YDR141C 5097 nt0.9□□□□□ -2.27
UFD1P53044 BUD3YCL014W 4911 nt0.9□□□□□ -2.27
UFD1P53044 BEM2YER155C 6504 nt0.89□□□□□ -2.27
UFD1P53044 EAF1YDR359C 2949 nt0.89□□□□□ -2.27
UFD1P53044 YDL206WYDL206W 2289 nt0.89□□□□□ -2.27
UFD1P53044 MAM33YIL070C 801 nt0.89□□□□□ -2.27
UFD1P53044 RPL38YLR325C 237 nt0.89□□□□□ -2.27
UFD1P53044 YPR170W-AYPR170W-A 186 nt0.89□□□□□ -2.27
UFD1P53044 CDC39YCR093W 6327 nt0.89□□□□□ -2.27
UFD1P53044 GEA2YEL022W 4380 nt0.89□□□□□ -2.27
UFD1P53044 RIM20YOR275C 1986 nt0.88□□□□□ -2.27
UFD1P53044 SEC3YER008C 4011 nt0.88□□□□□ -2.27
UFD1P53044 PDE2YOR360C 1581 nt0.88□□□□□ -2.27
UFD1P53044 NUP145YGL092W 3954 nt0.88□□□□□ -2.27
UFD1P53044 YDR118W-AYDR118W-A 117 nt0.88□□□□□ -2.27
UFD1P53044 GPG1YGL121C 381 nt0.88□□□□□ -2.27
UFD1P53044 PCC1YKR095W-A 267 nt0.88□□□□□ -2.27
UFD1P53044 YBR200W-AYBR200W-A 165 nt0.88□□□□□ -2.27
UFD1P53044 STB6YKL072W 2301 nt0.88□□□□□ -2.27
UFD1P53044 CUL3YGR003W 2235 nt0.87□□□□□ -2.27
UFD1P53044 STF2YGR008C 255 nt0.87□□□□□ -2.27
UFD1P53044 IFH1YLR223C 3258 nt0.87□□□□□ -2.27
UFD1P53044 YGR035CYGR035C 351 nt0.86□□□□□ -2.27
UFD1P53044 BIL1YOR304C-A 231 nt0.86□□□□□ -2.27
UFD1P53044 WAR1YML076C 2835 nt0.86□□□□□ -2.27
UFD1P53044 SMC1YFL008W 3678 nt0.86□□□□□ -2.27
UFD1P53044 YJR011CYJR011C 786 nt0.85□□□□□ -2.27
UFD1P53044 CLU1YMR012W 3834 nt0.85□□□□□ -2.27
UFD1P53044 YAR009CYAR009C 3591 nt0.84□□□□□ -2.27
UFD1P53044 ALY2YJL084C 3141 nt0.84□□□□□ -2.27
UFD1P53044 YLR334CYLR334C 381 nt0.84□□□□□ -2.27
UFD1P53044 HUG1YML058W-A 207 nt0.84□□□□□ -2.27
UFD1P53044 UBP3YER151C 2739 nt0.84□□□□□ -2.28
UFD1P53044 YLL007CYLL007C 1998 nt0.83□□□□□ -2.28
UFD1P53044 RPL35AYDL191W 363 nt0.83□□□□□ -2.28
UFD1P53044 YIR044CYIR044C 186 nt0.83□□□□□ -2.28
UFD1P53044 YAR029WYAR029W 225 nt0.83□□□□□ -2.28
UFD1P53044 YAL063C-AYAL063C-A 291 nt0.82□□□□□ -2.28
UFD1P53044 HTB2YBL002W 396 nt0.82□□□□□ -2.28
UFD1P53044 NIP100YPL174C 2607 nt0.82□□□□□ -2.28
UFD1P53044 PAM16YJL104W 450 nt0.81□□□□□ -2.28
UFD1P53044 YPR012WYPR012W 255 nt0.81□□□□□ -2.28
UFD1P53044 YPR016W-AYPR016W-A 261 nt0.81□□□□□ -2.28
UFD1P53044 PTP2YOR208W 2253 nt0.81□□□□□ -2.28
UFD1P53044 KAP120YPL125W 3099 nt0.8□□□□□ -2.28
UFD1P53044 YOR029WYOR029W 336 nt0.8□□□□□ -2.28
UFD1P53044 YBR206WYBR206W 324 nt0.79□□□□□ -2.28
UFD1P53044 YCK3YER123W 1575 nt0.79□□□□□ -2.28
UFD1P53044 YDR048CYDR048C 315 nt0.78□□□□□ -2.28
UFD1P53044 YDR521WYDR521W 336 nt0.78□□□□□ -2.28
UFD1P53044 ECM12YHR021W-A 456 nt0.77□□□□□ -2.29
UFD1P53044 YBR064WYBR064W 429 nt0.77□□□□□ -2.29
UFD1P53044 PAU24YBR301W 363 nt0.77□□□□□ -2.29
UFD1P53044 NUP157YER105C 4176 nt0.77□□□□□ -2.29
UFD1P53044 YDR344CYDR344C 444 nt0.76□□□□□ -2.29
UFD1P53044 PAN2YGL094C 3348 nt0.76□□□□□ -2.29
UFD1P53044 YPR117WYPR117W 7470 nt0.75□□□□□ -2.29
UFD1P53044 OST1YJL002C 1431 nt0.75□□□□□ -2.29
UFD1P53044 HMRA2YCR096C 360 nt0.75□□□□□ -2.29
UFD1P53044 YDL196WYDL196W 330 nt0.75□□□□□ -2.29
UFD1P53044 YHR007C-AYHR007C-A 216 nt0.75□□□□□ -2.29
UFD1P53044 IES4YOR189W 351 nt0.75□□□□□ -2.29
UFD1P53044 YPR197CYPR197C 564 nt0.75□□□□□ -2.29
UFD1P53044 OLI1Q0130 231 nt0.73□□□□□ -2.29
UFD1P53044 YOR011W-AYOR011W-A 207 nt0.73□□□□□ -2.29
UFD1P53044 DBP6YNR038W 1890 nt0.72□□□□□ -2.29
UFD1P53044 SSS1YDR086C 243 nt0.72□□□□□ -2.29
UFD1P53044 ALG13YGL047W 609 nt0.72□□□□□ -2.29
UFD1P53044 YHL042WYHL042W 453 nt0.72□□□□□ -2.29
UFD1P53044 YAF9YNL107W 681 nt0.72□□□□□ -2.29
UFD1P53044 MCM10YIL150C 1716 nt0.72□□□□□ -2.29
UFD1P53044 RKR1YMR247C 4689 nt0.71□□□□□ -2.3
UFD1P53044 TAR1YLR154W-C 375 nt0.71□□□□□ -2.3
UFD1P53044 RPS25BYLR333C 327 nt0.71□□□□□ -2.3
UFD1P53044 YDL073WYDL073W 2955 nt0.71□□□□□ -2.3
UFD1P53044 GIM4YEL003W 336 nt0.7□□□□□ -2.3
UFD1P53044 ISD11YER048W-A 285 nt0.7□□□□□ -2.3
UFD1P53044 YPL038W-AYPL038W-A 192 nt0.7□□□□□ -2.3
UFD1P53044 BFR2YDR299W 1605 nt0.69□□□□□ -2.3
UFD1P53044 HMRA1YCR097W 381 nt0.69□□□□□ -2.3
UFD1P53044 YHR175W-AYHR175W-A 150 nt0.69□□□□□ -2.3
UFD1P53044 RPS30BYOR182C 192 nt0.69□□□□□ -2.3
UFD1P53044 snR56snR56 88 nt0.68□□□□□ -2.3
UFD1P53044 YDR102CYDR102C 333 nt0.68□□□□□ -2.3
UFD1P53044 YHL046W-AYHL046W-A 327 nt0.68□□□□□ -2.3
UFD1P53044 CMC4YMR194C-B 222 nt0.68□□□□□ -2.3
UFD1P53044 SGF11YPL047W 300 nt0.68□□□□□ -2.3
UFD1P53044 SPO21YOL091W 1830 nt0.67□□□□□ -2.3
UFD1P53044 YJL120WYJL120W 324 nt0.67□□□□□ -2.3
UFD1P53044 YOR282WYOR282W 321 nt0.67□□□□□ -2.3
UFD1P53044 YPL044CYPL044C 549 nt0.67□□□□□ -2.3
UFD1P53044 PRP16YKR086W 3216 nt0.67□□□□□ -2.3
UFD1P53044 SEC1YDR164C 2175 nt0.66□□□□□ -2.3
UFD1P53044 YIL115W-AYIL115W-A 372 nt0.66□□□□□ -2.3
UFD1P53044 YIL142C-AYIL142C-A 333 nt0.66□□□□□ -2.3
UFD1P53044 YPL225WYPL225W 441 nt0.66□□□□□ -2.3
Retrieved 100 of 7,029 protein–RNA pairs in 45.9 ms