Protein–RNA interactions for Protein: P40561

SGN1, RNA-binding protein SGN1, yeastyeast

Known RBP RIP-Chip data

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SGN1P40561 YER097WYER097W 330 nt1.34□□□□□ -2.19
SGN1P40561 YFL063WYFL063W 456 nt1.33□□□□□ -2.2
SGN1P40561 STE5YDR103W 2754 nt1.33□□□□□ -2.2
SGN1P40561 YCK3YER123W 1575 nt1.33□□□□□ -2.2
SGN1P40561 FIG4YNL325C 2640 nt1.33□□□□□ -2.2
SGN1P40561 PDE2YOR360C 1581 nt1.32□□□□□ -2.2
SGN1P40561 DBP6YNR038W 1890 nt1.32□□□□□ -2.2
SGN1P40561 SEC21YNL287W 2808 nt1.32□□□□□ -2.2
SGN1P40561 YDL206WYDL206W 2289 nt1.32□□□□□ -2.2
SGN1P40561 YHL042WYHL042W 453 nt1.31□□□□□ -2.2
SGN1P40561 YLL020CYLL020C 306 nt1.31□□□□□ -2.2
SGN1P40561 YMR193C-AYMR193C-A 387 nt1.31□□□□□ -2.2
SGN1P40561 YNL146WYNL146W 303 nt1.31□□□□□ -2.2
SGN1P40561 CAT8YMR280C 4302 nt1.31□□□□□ -2.2
SGN1P40561 YMR031W-AYMR031W-A 327 nt1.3□□□□□ -2.2
SGN1P40561 YMR321CYMR321C 318 nt1.3□□□□□ -2.2
SGN1P40561 snR14snR14 160 nt1.3□□□□□ -2.2
SGN1P40561 IRA1YBR140C 9279 nt1.3□□□□□ -2.2
SGN1P40561 CDC36YDL165W 576 nt1.29□□□□□ -2.2
SGN1P40561 ALG13YGL047W 609 nt1.29□□□□□ -2.2
SGN1P40561 YIL032CYIL032C 357 nt1.29□□□□□ -2.2
SGN1P40561 RRT15YLR162W-A 189 nt1.29□□□□□ -2.2
SGN1P40561 CDC31YOR257W 486 nt1.29□□□□□ -2.2
SGN1P40561 APL3YBL037W 3078 nt1.29□□□□□ -2.2
SGN1P40561 SPC110YDR356W 2835 nt1.29□□□□□ -2.2
SGN1P40561 PMD1YER132C 5262 nt1.28□□□□□ -2.2
SGN1P40561 PIK1YNL267W 3201 nt1.28□□□□□ -2.2
SGN1P40561 YBR200W-AYBR200W-A 165 nt1.28□□□□□ -2.2
SGN1P40561 RSM22YKL155C 1887 nt1.28□□□□□ -2.2
SGN1P40561 SET3YKR029C 2256 nt1.27□□□□□ -2.21
SGN1P40561 SSS1YDR086C 243 nt1.27□□□□□ -2.21
SGN1P40561 YDR521WYDR521W 336 nt1.27□□□□□ -2.21
SGN1P40561 YBR174CYBR174C 315 nt1.27□□□□□ -2.21
SGN1P40561 STO1YMR125W 2586 nt1.26□□□□□ -2.21
SGN1P40561 YBR221W-AYBR221W-A 105 nt1.26□□□□□ -2.21
SGN1P40561 SMC1YFL008W 3678 nt1.26□□□□□ -2.21
SGN1P40561 YAR009CYAR009C 3591 nt1.25□□□□□ -2.21
SGN1P40561 PFD1YJL179W 330 nt1.25□□□□□ -2.21
SGN1P40561 RPS25BYLR333C 327 nt1.25□□□□□ -2.21
SGN1P40561 YBL008W-AYBL008W-A 240 nt1.25□□□□□ -2.21
SGN1P40561 MSH3YCR092C 3057 nt1.25□□□□□ -2.21
SGN1P40561 NUP188YML103C 4968 nt1.25□□□□□ -2.21
SGN1P40561 YJR029WYJR029W 5268 nt1.24□□□□□ -2.21
SGN1P40561 YPR137C-BYPR137C-B 5268 nt1.24□□□□□ -2.21
SGN1P40561 snR60snR60 104 nt1.24□□□□□ -2.21
SGN1P40561 CSE2YNR010W 450 nt1.24□□□□□ -2.21
SGN1P40561 YOR218CYOR218C 420 nt1.24□□□□□ -2.21
SGN1P40561 HKR1YDR420W 5409 nt1.22□□□□□ -2.21
SGN1P40561 WAR1YML076C 2835 nt1.22□□□□□ -2.21
SGN1P40561 POL5YEL055C 3069 nt1.22□□□□□ -2.21
SGN1P40561 VIK1YPL253C 1944 nt1.22□□□□□ -2.21
SGN1P40561 COG8YML071C 1824 nt1.22□□□□□ -2.21
SGN1P40561 SPO75YLL005C 2607 nt1.21□□□□□ -2.22
SGN1P40561 snR65snR65 100 nt1.21□□□□□ -2.22
SGN1P40561 RPS27BYHR021C 249 nt1.21□□□□□ -2.22
SGN1P40561 YIL115W-AYIL115W-A 372 nt1.21□□□□□ -2.22
SGN1P40561 YJL120WYJL120W 324 nt1.21□□□□□ -2.22
SGN1P40561 SLD3YGL113W 2007 nt1.21□□□□□ -2.22
SGN1P40561 YGR109W-BYGR109W-B 4644 nt1.21□□□□□ -2.22
SGN1P40561 EAF1YDR359C 2949 nt1.2□□□□□ -2.22
SGN1P40561 NUP157YER105C 4176 nt1.2□□□□□ -2.22
SGN1P40561 YDR344CYDR344C 444 nt1.2□□□□□ -2.22
SGN1P40561 YNL028WYNL028W 318 nt1.2□□□□□ -2.22
SGN1P40561 YIL020C-AYIL020C-A 339 nt1.19□□□□□ -2.22
SGN1P40561 YOR011W-AYOR011W-A 207 nt1.19□□□□□ -2.22
SGN1P40561 RAD9YDR217C 3930 nt1.19□□□□□ -2.22
SGN1P40561 YBR206WYBR206W 324 nt1.18□□□□□ -2.22
SGN1P40561 YOR008C-AYOR008C-A 225 nt1.17□□□□□ -2.22
SGN1P40561 STB6YKL072W 2301 nt1.17□□□□□ -2.22
SGN1P40561 PET127YOR017W 2403 nt1.17□□□□□ -2.22
SGN1P40561 SPO21YOL091W 1830 nt1.17□□□□□ -2.22
SGN1P40561 TRM732YMR259C 4263 nt1.16□□□□□ -2.22
SGN1P40561 FYV8YGR196C 2454 nt1.16□□□□□ -2.22
SGN1P40561 PAA1YDR071C 576 nt1.14□□□□□ -2.23
SGN1P40561 tQ(UUG)E2tQ(UUG)E2 72 nt1.14□□□□□ -2.23
SGN1P40561 YLR419WYLR419W 4308 nt1.13□□□□□ -2.23
SGN1P40561 tH(GUG)E1tH(GUG)E1 72 nt1.13□□□□□ -2.23
SGN1P40561 tH(GUG)E2tH(GUG)E2 72 nt1.13□□□□□ -2.23
SGN1P40561 tH(GUG)G1tH(GUG)G1 72 nt1.13□□□□□ -2.23
SGN1P40561 tH(GUG)G2tH(GUG)G2 72 nt1.13□□□□□ -2.23
SGN1P40561 tH(GUG)HtH(GUG)H 72 nt1.13□□□□□ -2.23
SGN1P40561 tH(GUG)KtH(GUG)K 72 nt1.13□□□□□ -2.23
SGN1P40561 tH(GUG)MtH(GUG)M 72 nt1.13□□□□□ -2.23
SGN1P40561 LAA1YJL207C 6045 nt1.12□□□□□ -2.23
SGN1P40561 MCM10YIL150C 1716 nt1.12□□□□□ -2.23
SGN1P40561 OLI1Q0130 231 nt1.12□□□□□ -2.23
SGN1P40561 INA22YIR024C 651 nt1.12□□□□□ -2.23
SGN1P40561 RAD61YDR014W 1944 nt1.12□□□□□ -2.23
SGN1P40561 YGR130CYGR130C 2451 nt1.11□□□□□ -2.23
SGN1P40561 NST1YNL091W 3723 nt1.11□□□□□ -2.23
SGN1P40561 ISD11YER048W-A 285 nt1.11□□□□□ -2.23
SGN1P40561 IES4YOR189W 351 nt1.11□□□□□ -2.23
SGN1P40561 YBR064WYBR064W 429 nt1.11□□□□□ -2.23
SGN1P40561 ECM12YHR021W-A 456 nt1.1□□□□□ -2.23
SGN1P40561 YNL277W-AYNL277W-A 189 nt1.1□□□□□ -2.23
SGN1P40561 YPL044CYPL044C 549 nt1.1□□□□□ -2.23
SGN1P40561 YGR069WYGR069W 336 nt1.09□□□□□ -2.23
SGN1P40561 YOR282WYOR282W 321 nt1.09□□□□□ -2.23
SGN1P40561 NOP9YJL010C 2001 nt1.07□□□□□ -2.24
SGN1P40561 IML1YJR138W 4755 nt1.07□□□□□ -2.24
Retrieved 100 of 7,029 protein–RNA pairs in 31 ms