Protein–RNA interactions for Protein: P40089

LSM5, U6 snRNA-associated Sm-like protein LSm5, yeastyeast

Known RBP Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM5P40089 ROM2YLR371W 4071 nt1.17□□□□□ -2.22
LSM5P40089 SLD3YGL113W 2007 nt1.16□□□□□ -2.22
LSM5P40089 YLL007CYLL007C 1998 nt1.16□□□□□ -2.22
LSM5P40089 tV(UAC)BtV(UAC)B 74 nt1.16□□□□□ -2.22
LSM5P40089 tV(UAC)DtV(UAC)D 74 nt1.16□□□□□ -2.22
LSM5P40089 YPR170W-AYPR170W-A 186 nt1.16□□□□□ -2.22
LSM5P40089 PAN2YGL094C 3348 nt1.16□□□□□ -2.22
LSM5P40089 YGR035CYGR035C 351 nt1.15□□□□□ -2.23
LSM5P40089 YAR009CYAR009C 3591 nt1.15□□□□□ -2.23
LSM5P40089 YDR169C-AYDR169C-A 150 nt1.14□□□□□ -2.23
LSM5P40089 MDS3YGL197W 4464 nt1.14□□□□□ -2.23
LSM5P40089 APL1YJR005W 2103 nt1.13□□□□□ -2.23
LSM5P40089 NUP157YER105C 4176 nt1.12□□□□□ -2.23
LSM5P40089 SIP4YJL089W 2490 nt1.12□□□□□ -2.23
LSM5P40089 NIP100YPL174C 2607 nt1.11□□□□□ -2.23
LSM5P40089 RPL34BYIL052C 366 nt1.11□□□□□ -2.23
LSM5P40089 IML1YJR138W 4755 nt1.1□□□□□ -2.23
LSM5P40089 YJR011CYJR011C 786 nt1.1□□□□□ -2.23
LSM5P40089 YBL008W-AYBL008W-A 240 nt1.1□□□□□ -2.23
LSM5P40089 CDC39YCR093W 6327 nt1.1□□□□□ -2.23
LSM5P40089 CSN9YDR179C 489 nt1.09□□□□□ -2.23
LSM5P40089 LAA1YJL207C 6045 nt1.09□□□□□ -2.24
LSM5P40089 SPO75YLL005C 2607 nt1.08□□□□□ -2.24
LSM5P40089 HMRA2YCR096C 360 nt1.08□□□□□ -2.24
LSM5P40089 HTB2YBL002W 396 nt1.08□□□□□ -2.24
LSM5P40089 YDR118W-AYDR118W-A 117 nt1.07□□□□□ -2.24
LSM5P40089 YAR029WYAR029W 225 nt1.07□□□□□ -2.24
LSM5P40089 YPR012WYPR012W 255 nt1.07□□□□□ -2.24
LSM5P40089 GEA2YEL022W 4380 nt1.06□□□□□ -2.24
LSM5P40089 tW(UCA)QtW(UCA)Q 74 nt1.06□□□□□ -2.24
LSM5P40089 YOR029WYOR029W 336 nt1.06□□□□□ -2.24
LSM5P40089 OST1YJL002C 1431 nt1.06□□□□□ -2.24
LSM5P40089 NST1YNL091W 3723 nt1.05□□□□□ -2.24
LSM5P40089 YJR029WYJR029W 5268 nt1.05□□□□□ -2.24
LSM5P40089 YPR137C-BYPR137C-B 5268 nt1.05□□□□□ -2.24
LSM5P40089 YDR521WYDR521W 336 nt1.04□□□□□ -2.24
LSM5P40089 YHL042WYHL042W 453 nt1.04□□□□□ -2.24
LSM5P40089 SPT7YBR081C 3999 nt1.04□□□□□ -2.24
LSM5P40089 RPL35AYDL191W 363 nt1.03□□□□□ -2.24
LSM5P40089 ISD11YER048W-A 285 nt1.03□□□□□ -2.24
LSM5P40089 YCK3YER123W 1575 nt1.03□□□□□ -2.24
LSM5P40089 VAM6YDL077C 3150 nt1.03□□□□□ -2.24
LSM5P40089 IES4YOR189W 351 nt1.02□□□□□ -2.25
LSM5P40089 KAP120YPL125W 3099 nt1.02□□□□□ -2.25
LSM5P40089 DBP6YNR038W 1890 nt1.01□□□□□ -2.25
LSM5P40089 ALG13YGL047W 609 nt1.01□□□□□ -2.25
LSM5P40089 YHL046W-AYHL046W-A 327 nt1.01□□□□□ -2.25
LSM5P40089 YLR334CYLR334C 381 nt1.01□□□□□ -2.25
LSM5P40089 YOR282WYOR282W 321 nt1.01□□□□□ -2.25
LSM5P40089 SCC2YDR180W 4482 nt1□□□□□ -2.25
LSM5P40089 YDL196WYDL196W 330 nt0.99□□□□□ -2.25
LSM5P40089 HUG1YML058W-A 207 nt0.99□□□□□ -2.25
LSM5P40089 YBR206WYBR206W 324 nt0.99□□□□□ -2.25
LSM5P40089 OLI1Q0130 231 nt0.98□□□□□ -2.25
LSM5P40089 YPR016W-AYPR016W-A 261 nt0.98□□□□□ -2.25
LSM5P40089 SPO21YOL091W 1830 nt0.98□□□□□ -2.25
LSM5P40089 YDR048CYDR048C 315 nt0.97□□□□□ -2.25
LSM5P40089 STF2YGR008C 255 nt0.97□□□□□ -2.25
LSM5P40089 YHR007C-AYHR007C-A 216 nt0.97□□□□□ -2.25
LSM5P40089 YPL038W-AYPL038W-A 192 nt0.97□□□□□ -2.25
LSM5P40089 YBR064WYBR064W 429 nt0.97□□□□□ -2.25
LSM5P40089 TAR1YLR154W-C 375 nt0.96□□□□□ -2.26
LSM5P40089 YOR011W-AYOR011W-A 207 nt0.96□□□□□ -2.26
LSM5P40089 YPL044CYPL044C 549 nt0.96□□□□□ -2.26
LSM5P40089 YPR197CYPR197C 564 nt0.96□□□□□ -2.26
LSM5P40089 RPS25BYLR333C 327 nt0.95□□□□□ -2.26
LSM5P40089 YPR117WYPR117W 7470 nt0.94□□□□□ -2.26
LSM5P40089 PAA1YDR071C 576 nt0.94□□□□□ -2.26
LSM5P40089 ECM12YHR021W-A 456 nt0.94□□□□□ -2.26
LSM5P40089 YDR344CYDR344C 444 nt0.93□□□□□ -2.26
LSM5P40089 EMT1tM(CAU)D 73 nt0.93□□□□□ -2.26
LSM5P40089 EMT5tM(CAU)J1 73 nt0.93□□□□□ -2.26
LSM5P40089 EMT3tM(CAU)J2 73 nt0.93□□□□□ -2.26
LSM5P40089 EMT4tM(CAU)M 73 nt0.93□□□□□ -2.26
LSM5P40089 EMT2tM(CAU)O2 73 nt0.93□□□□□ -2.26
LSM5P40089 PAM16YJL104W 450 nt0.92□□□□□ -2.26
LSM5P40089 CMC4YMR194C-B 222 nt0.91□□□□□ -2.26
LSM5P40089 YMR321CYMR321C 318 nt0.91□□□□□ -2.26
LSM5P40089 NOP9YJL010C 2001 nt0.91□□□□□ -2.26
LSM5P40089 YHR063W-AYHR063W-A 336 nt0.9□□□□□ -2.27
LSM5P40089 MCM10YIL150C 1716 nt0.89□□□□□ -2.27
LSM5P40089 YJL120WYJL120W 324 nt0.88□□□□□ -2.27
LSM5P40089 BEM2YER155C 6504 nt0.88□□□□□ -2.27
LSM5P40089 RPL26BYGR034W 384 nt0.87□□□□□ -2.27
LSM5P40089 PMP1YCR024C-A 123 nt0.86□□□□□ -2.27
LSM5P40089 YPL225WYPL225W 441 nt0.86□□□□□ -2.27
LSM5P40089 PAU24YBR301W 363 nt0.86□□□□□ -2.27
LSM5P40089 BFR2YDR299W 1605 nt0.86□□□□□ -2.27
LSM5P40089 SSS1YDR086C 243 nt0.85□□□□□ -2.27
LSM5P40089 YAF9YNL107W 681 nt0.85□□□□□ -2.27
LSM5P40089 NHP2YDL208W 471 nt0.84□□□□□ -2.27
LSM5P40089 CSE2YNR010W 450 nt0.84□□□□□ -2.27
LSM5P40089 RPS30BYOR182C 192 nt0.84□□□□□ -2.27
LSM5P40089 YOR218CYOR218C 420 nt0.84□□□□□ -2.27
LSM5P40089 YDL240C-AYDL240C-A 138 nt0.83□□□□□ -2.28
LSM5P40089 YDR102CYDR102C 333 nt0.83□□□□□ -2.28
LSM5P40089 SGF11YPL047W 300 nt0.83□□□□□ -2.28
LSM5P40089 RPS27BYHR021C 249 nt0.82□□□□□ -2.28
LSM5P40089 YNL211CYNL211C 261 nt0.82□□□□□ -2.28
LSM5P40089 NPR2YEL062W 1848 nt0.82□□□□□ -2.28
Retrieved 100 of 7,029 protein–RNA pairs in 40.6 ms