Protein–RNA interactions for Protein: A0A0B7P3V8

TY4B-P, Transposon Ty4-P Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY4B-PA0A0B7P3V8 PTP2YOR208W 2253 nt2.58□□□□□ -2
TY4B-PA0A0B7P3V8 HSH155YMR288W 2916 nt2.58□□□□□ -2
TY4B-PA0A0B7P3V8 YNL144CYNL144C 2223 nt2.57□□□□□ -2
TY4B-PA0A0B7P3V8 YDR354C-AYDR354C-A 144 nt2.57□□□□□ -2
TY4B-PA0A0B7P3V8 YHR180W-AYHR180W-A 183 nt2.57□□□□□ -2
TY4B-PA0A0B7P3V8 COX12YLR038C 252 nt2.57□□□□□ -2
TY4B-PA0A0B7P3V8 snR45snR45 172 nt2.57□□□□□ -2
TY4B-PA0A0B7P3V8 DCP2YNL118C 2913 nt2.57□□□□□ -2
TY4B-PA0A0B7P3V8 STF2YGR008C 255 nt2.56□□□□□ -2
TY4B-PA0A0B7P3V8 ENV11YGR071C 2583 nt2.55□□□□□ -2
TY4B-PA0A0B7P3V8 TUS1YLR425W 3924 nt2.55□□□□□ -2
TY4B-PA0A0B7P3V8 RGA1YOR127W 3024 nt2.55□□□□□ -2
TY4B-PA0A0B7P3V8 YPL150WYPL150W 2706 nt2.55□□□□□ -2
TY4B-PA0A0B7P3V8 SEC26YDR238C 2922 nt2.54□□□□□ -2
TY4B-PA0A0B7P3V8 RPO41YFL036W 4056 nt2.54□□□□□ -2
TY4B-PA0A0B7P3V8 SCP160YJL080C 3669 nt2.53□□□□□ -2
TY4B-PA0A0B7P3V8 APL2YKL135C 2181 nt2.53□□□□□ -2
TY4B-PA0A0B7P3V8 PHO91YNR013C 2685 nt2.53□□□□□ -2
TY4B-PA0A0B7P3V8 IFH1YLR223C 3258 nt2.53□□□□□ -2
TY4B-PA0A0B7P3V8 FKS3YMR306W 5358 nt2.53□□□□□ -2.01
TY4B-PA0A0B7P3V8 IST2YBR086C 2841 nt2.52□□□□□ -2.01
TY4B-PA0A0B7P3V8 YIL002W-AYIL002W-A 210 nt2.52□□□□□ -2.01
TY4B-PA0A0B7P3V8 YJL026C-AYJL026C-A 222 nt2.52□□□□□ -2.01
TY4B-PA0A0B7P3V8 RAV1YJR033C 4074 nt2.52□□□□□ -2.01
TY4B-PA0A0B7P3V8 YLL054CYLL054C 2532 nt2.51□□□□□ -2.01
TY4B-PA0A0B7P3V8 YCR087C-AYCR087C-A 462 nt2.51□□□□□ -2.01
TY4B-PA0A0B7P3V8 snR70snR70 164 nt2.51□□□□□ -2.01
TY4B-PA0A0B7P3V8 ATG11YPR049C 3537 nt2.51□□□□□ -2.01
TY4B-PA0A0B7P3V8 UBR1YGR184C 5853 nt2.5□□□□□ -2.01
TY4B-PA0A0B7P3V8 BNI1YNL271C 5862 nt2.5□□□□□ -2.01
TY4B-PA0A0B7P3V8 SAP190YKR028W 3102 nt2.5□□□□□ -2.01
TY4B-PA0A0B7P3V8 SMC6YLR383W 3345 nt2.5□□□□□ -2.01
TY4B-PA0A0B7P3V8 YDR521WYDR521W 336 nt2.5□□□□□ -2.01
TY4B-PA0A0B7P3V8 DNA2YHR164C 4569 nt2.49□□□□□ -2.01
TY4B-PA0A0B7P3V8 ALK1YGL021W 2283 nt2.49□□□□□ -2.01
TY4B-PA0A0B7P3V8 YOL098CYOL098C 3114 nt2.49□□□□□ -2.01
TY4B-PA0A0B7P3V8 IRA2YOL081W 9240 nt2.49□□□□□ -2.01
TY4B-PA0A0B7P3V8 TTI1YKL033W 3117 nt2.48□□□□□ -2.01
TY4B-PA0A0B7P3V8 STE11YLR362W 2154 nt2.47□□□□□ -2.01
TY4B-PA0A0B7P3V8 YGL182CYGL182C 324 nt2.47□□□□□ -2.01
TY4B-PA0A0B7P3V8 NAB6YML117W 3405 nt2.47□□□□□ -2.01
TY4B-PA0A0B7P3V8 BUB1YGR188C 3066 nt2.47□□□□□ -2.01
TY4B-PA0A0B7P3V8 SAP185YJL098W 3177 nt2.47□□□□□ -2.01
TY4B-PA0A0B7P3V8 STH1YIL126W 4080 nt2.47□□□□□ -2.01
TY4B-PA0A0B7P3V8 MMS22YLR320W 4365 nt2.47□□□□□ -2.01
TY4B-PA0A0B7P3V8 MAK10YEL053C 2202 nt2.46□□□□□ -2.02
TY4B-PA0A0B7P3V8 YLR035C-AYLR035C-A 3468 nt2.46□□□□□ -2.02
TY4B-PA0A0B7P3V8 IRC8YJL051W 2469 nt2.45□□□□□ -2.02
TY4B-PA0A0B7P3V8 YAL067W-AYAL067W-A 228 nt2.45□□□□□ -2.02
TY4B-PA0A0B7P3V8 PDR1YGL013C 3207 nt2.45□□□□□ -2.02
TY4B-PA0A0B7P3V8 RCO1YMR075W 2055 nt2.44□□□□□ -2.02
TY4B-PA0A0B7P3V8 MLH3YPL164C 2148 nt2.44□□□□□ -2.02
TY4B-PA0A0B7P3V8 ARP8YOR141C 2646 nt2.43□□□□□ -2.02
TY4B-PA0A0B7P3V8 QCR9YGR183C 201 nt2.43□□□□□ -2.02
TY4B-PA0A0B7P3V8 MET18YIL128W 3099 nt2.43□□□□□ -2.02
TY4B-PA0A0B7P3V8 LHS1YKL073W 2646 nt2.42□□□□□ -2.02
TY4B-PA0A0B7P3V8 RTT107YHR154W 3213 nt2.42□□□□□ -2.02
TY4B-PA0A0B7P3V8 YGR109W-BYGR109W-B 4644 nt2.42□□□□□ -2.02
TY4B-PA0A0B7P3V8 YPP1YGR198W 2454 nt2.42□□□□□ -2.02
TY4B-PA0A0B7P3V8 PDR3YBL005W 2931 nt2.42□□□□□ -2.02
TY4B-PA0A0B7P3V8 APL1YJR005W 2103 nt2.42□□□□□ -2.02
TY4B-PA0A0B7P3V8 RTT101YJL047C 2529 nt2.41□□□□□ -2.02
TY4B-PA0A0B7P3V8 GIP3YPL137C 3831 nt2.41□□□□□ -2.02
TY4B-PA0A0B7P3V8 YHR131W-AYHR131W-A 246 nt2.41□□□□□ -2.02
TY4B-PA0A0B7P3V8 YKR075W-AYKR075W-A 270 nt2.41□□□□□ -2.02
TY4B-PA0A0B7P3V8 HMI1YOL095C 2121 nt2.41□□□□□ -2.02
TY4B-PA0A0B7P3V8 PKH2YOL100W 3246 nt2.4□□□□□ -2.02
TY4B-PA0A0B7P3V8 snR81snR81 201 nt2.4□□□□□ -2.03
TY4B-PA0A0B7P3V8 tW(CCA)G1tW(CCA)G1 72 nt2.4□□□□□ -2.03
TY4B-PA0A0B7P3V8 tW(CCA)G2tW(CCA)G2 72 nt2.4□□□□□ -2.03
TY4B-PA0A0B7P3V8 tW(CCA)JtW(CCA)J 72 nt2.4□□□□□ -2.03
TY4B-PA0A0B7P3V8 tW(CCA)KtW(CCA)K 72 nt2.4□□□□□ -2.03
TY4B-PA0A0B7P3V8 tW(CCA)MtW(CCA)M 72 nt2.4□□□□□ -2.03
TY4B-PA0A0B7P3V8 tW(CCA)PtW(CCA)P 72 nt2.4□□□□□ -2.03
TY4B-PA0A0B7P3V8 BUD2YKL092C 3315 nt2.4□□□□□ -2.03
TY4B-PA0A0B7P3V8 STB6YKL072W 2301 nt2.4□□□□□ -2.03
TY4B-PA0A0B7P3V8 INO80YGL150C 4470 nt2.39□□□□□ -2.03
TY4B-PA0A0B7P3V8 UBP1YDL122W 2430 nt2.39□□□□□ -2.03
TY4B-PA0A0B7P3V8 YOR055WYOR055W 435 nt2.39□□□□□ -2.03
TY4B-PA0A0B7P3V8 UTP8YGR128C 2142 nt2.38□□□□□ -2.03
TY4B-PA0A0B7P3V8 PDR11YIL013C 4236 nt2.38□□□□□ -2.03
TY4B-PA0A0B7P3V8 YIL156W-BYIL156W-B 222 nt2.38□□□□□ -2.03
TY4B-PA0A0B7P3V8 snR39BsnR39B 96 nt2.38□□□□□ -2.03
TY4B-PA0A0B7P3V8 NUP170YBL079W 4509 nt2.38□□□□□ -2.03
TY4B-PA0A0B7P3V8 MSH5YDL154W 2706 nt2.38□□□□□ -2.03
TY4B-PA0A0B7P3V8 ATG9YDL149W 2994 nt2.37□□□□□ -2.03
TY4B-PA0A0B7P3V8 COG4YPR105C 2586 nt2.36□□□□□ -2.03
TY4B-PA0A0B7P3V8 YLL020CYLL020C 306 nt2.36□□□□□ -2.03
TY4B-PA0A0B7P3V8 SVL3YPL032C 2478 nt2.36□□□□□ -2.03
TY4B-PA0A0B7P3V8 VPS8YAL002W 3825 nt2.36□□□□□ -2.03
TY4B-PA0A0B7P3V8 SLI15YBR156C 2097 nt2.35□□□□□ -2.03
TY4B-PA0A0B7P3V8 SEC63YOR254C 1992 nt2.34□□□□□ -2.03
TY4B-PA0A0B7P3V8 VPS13YLL040C 9435 nt2.34□□□□□ -2.03
TY4B-PA0A0B7P3V8 YBL039C-AYBL039C-A 84 nt2.34□□□□□ -2.03
TY4B-PA0A0B7P3V8 TRL1YJL087C 2484 nt2.34□□□□□ -2.04
TY4B-PA0A0B7P3V8 MDS3YGL197W 4464 nt2.34□□□□□ -2.04
TY4B-PA0A0B7P3V8 AGC1YPR021C 2709 nt2.33□□□□□ -2.04
TY4B-PA0A0B7P3V8 YMR175W-AYMR175W-A 195 nt2.33□□□□□ -2.04
TY4B-PA0A0B7P3V8 YOR343W-BYOR343W-B 5313 nt2.32□□□□□ -2.04
TY4B-PA0A0B7P3V8 USO1YDL058W 5373 nt2.32□□□□□ -2.04
Retrieved 100 of 7,029 protein–RNA pairs in 77.9 ms