Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNAP47Q5SQN1 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNAP47Q5SQN1 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
SNAP47Q5SQN1 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNAP47Q5SQN1 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.54■□□□□ 0.72
SNAP47Q5SQN1 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SNAP47Q5SQN1 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SNAP47Q5SQN1 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.54■□□□□ 0.72
SNAP47Q5SQN1 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNAP47Q5SQN1 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SNAP47Q5SQN1 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SNAP47Q5SQN1 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.53■□□□□ 0.72
SNAP47Q5SQN1 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SNAP47Q5SQN1 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
SNAP47Q5SQN1 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SNAP47Q5SQN1 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
SNAP47Q5SQN1 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SNAP47Q5SQN1 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.53■□□□□ 0.72
SNAP47Q5SQN1 POM121L13P-201ENST00000422362 380 ntBASIC19.53■□□□□ 0.72
SNAP47Q5SQN1 UBE2SP1-201ENST00000450587 669 ntBASIC19.53■□□□□ 0.72
SNAP47Q5SQN1 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
SNAP47Q5SQN1 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.53■□□□□ 0.72
SNAP47Q5SQN1 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.53■□□□□ 0.72
SNAP47Q5SQN1 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SNAP47Q5SQN1 RN7SL471P-201ENST00000580476 299 ntBASIC19.53■□□□□ 0.72
SNAP47Q5SQN1 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.53■□□□□ 0.72
SNAP47Q5SQN1 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SNAP47Q5SQN1 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SNAP47Q5SQN1 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SNAP47Q5SQN1 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.53■□□□□ 0.72
SNAP47Q5SQN1 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.53■□□□□ 0.72
SNAP47Q5SQN1 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SNAP47Q5SQN1 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SNAP47Q5SQN1 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SNAP47Q5SQN1 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
SNAP47Q5SQN1 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.52■□□□□ 0.72
SNAP47Q5SQN1 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SNAP47Q5SQN1 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SNAP47Q5SQN1 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
SNAP47Q5SQN1 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SNAP47Q5SQN1 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SNAP47Q5SQN1 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
SNAP47Q5SQN1 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SNAP47Q5SQN1 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
SNAP47Q5SQN1 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SNAP47Q5SQN1 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SNAP47Q5SQN1 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SNAP47Q5SQN1 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
SNAP47Q5SQN1 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SNAP47Q5SQN1 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SNAP47Q5SQN1 AL390719.1-204ENST00000412397 1219 ntBASIC19.52■□□□□ 0.72
SNAP47Q5SQN1 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.52■□□□□ 0.72
SNAP47Q5SQN1 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SNAP47Q5SQN1 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.52■□□□□ 0.72
SNAP47Q5SQN1 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.52■□□□□ 0.72
SNAP47Q5SQN1 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
SNAP47Q5SQN1 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.52■□□□□ 0.72
SNAP47Q5SQN1 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.52■□□□□ 0.71
SNAP47Q5SQN1 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
SNAP47Q5SQN1 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
SNAP47Q5SQN1 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
SNAP47Q5SQN1 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.52■□□□□ 0.71
SNAP47Q5SQN1 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
SNAP47Q5SQN1 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
SNAP47Q5SQN1 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
SNAP47Q5SQN1 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SNAP47Q5SQN1 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.51■□□□□ 0.71
SNAP47Q5SQN1 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.51■□□□□ 0.71
SNAP47Q5SQN1 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.51■□□□□ 0.71
SNAP47Q5SQN1 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SNAP47Q5SQN1 AL596275.1-201ENST00000423464 877 ntBASIC19.51■□□□□ 0.71
SNAP47Q5SQN1 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SNAP47Q5SQN1 AC008550.1-201ENST00000511500 884 ntBASIC19.51■□□□□ 0.71
SNAP47Q5SQN1 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.51■□□□□ 0.71
SNAP47Q5SQN1 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SNAP47Q5SQN1 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SNAP47Q5SQN1 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SNAP47Q5SQN1 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
SNAP47Q5SQN1 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SNAP47Q5SQN1 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SNAP47Q5SQN1 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SNAP47Q5SQN1 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SNAP47Q5SQN1 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.51■□□□□ 0.71
SNAP47Q5SQN1 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SNAP47Q5SQN1 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.51■□□□□ 0.71
SNAP47Q5SQN1 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SNAP47Q5SQN1 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
SNAP47Q5SQN1 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SNAP47Q5SQN1 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SNAP47Q5SQN1 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.5■□□□□ 0.71
SNAP47Q5SQN1 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SNAP47Q5SQN1 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SNAP47Q5SQN1 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.5■□□□□ 0.71
SNAP47Q5SQN1 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
SNAP47Q5SQN1 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
SNAP47Q5SQN1 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SNAP47Q5SQN1 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.5■□□□□ 0.71
SNAP47Q5SQN1 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.5■□□□□ 0.71
SNAP47Q5SQN1 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.5■□□□□ 0.71
SNAP47Q5SQN1 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms