Protein–RNA interactions for Protein: Q06106

MRD1, Multiple RNA-binding domain-containing protein 1, yeast

Known RBP Predictions only

Length 887 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
MRD1	Q06106	MSH3	YCR092C	3057 nt		1.6	□□□□□ -2.15
MRD1	Q06106	PET127	YOR017W	2403 nt		1.59	□□□□□ -2.16
MRD1	Q06106	SEC5	YDR166C	2916 nt		1.58	□□□□□ -2.16
MRD1	Q06106	KCS1	YDR017C	3153 nt		1.58	□□□□□ -2.16
MRD1	Q06106	PAU2	YEL049W	363 nt		1.58	□□□□□ -2.16
MRD1	Q06106	tH(GUG)E1	tH(GUG)E1	72 nt		1.58	□□□□□ -2.16
MRD1	Q06106	tH(GUG)E2	tH(GUG)E2	72 nt		1.58	□□□□□ -2.16
MRD1	Q06106	tH(GUG)G1	tH(GUG)G1	72 nt		1.58	□□□□□ -2.16
MRD1	Q06106	tH(GUG)G2	tH(GUG)G2	72 nt		1.58	□□□□□ -2.16
MRD1	Q06106	tH(GUG)H	tH(GUG)H	72 nt		1.58	□□□□□ -2.16
MRD1	Q06106	tH(GUG)K	tH(GUG)K	72 nt		1.58	□□□□□ -2.16
MRD1	Q06106	tH(GUG)M	tH(GUG)M	72 nt		1.58	□□□□□ -2.16
MRD1	Q06106	EMC5	YIL027C	426 nt		1.58	□□□□□ -2.16
MRD1	Q06106	RPB10	YOR210W	213 nt		1.58	□□□□□ -2.16
MRD1	Q06106	POL5	YEL055C	3069 nt		1.58	□□□□□ -2.16
MRD1	Q06106	YJR011C	YJR011C	786 nt		1.57	□□□□□ -2.16
MRD1	Q06106	snR51	snR51	107 nt		1.57	□□□□□ -2.16
MRD1	Q06106	PIG1	YLR273C	1947 nt		1.57	□□□□□ -2.16
MRD1	Q06106	YGR109W-B	YGR109W-B	4644 nt		1.57	□□□□□ -2.16
MRD1	Q06106	NHP2	YDL208W	471 nt		1.56	□□□□□ -2.16
MRD1	Q06106	YKL136W	YKL136W	399 nt		1.56	□□□□□ -2.16
MRD1	Q06106	RPL40B	YKR094C	387 nt		1.56	□□□□□ -2.16
MRD1	Q06106	MAD1	YGL086W	2250 nt		1.56	□□□□□ -2.16
MRD1	Q06106	CDC25	YLR310C	4770 nt		1.56	□□□□□ -2.16
MRD1	Q06106	RPL35A	YDL191W	363 nt		1.55	□□□□□ -2.16
MRD1	Q06106	YDR102C	YDR102C	333 nt		1.55	□□□□□ -2.16
MRD1	Q06106	YJL022W	YJL022W	309 nt		1.55	□□□□□ -2.16
MRD1	Q06106	YJL135W	YJL135W	318 nt		1.55	□□□□□ -2.16
MRD1	Q06106	LAA1	YJL207C	6045 nt		1.55	□□□□□ -2.16
MRD1	Q06106	YGR130C	YGR130C	2451 nt		1.55	□□□□□ -2.16
MRD1	Q06106	NCA2	YPR155C	1851 nt		1.54	□□□□□ -2.16
MRD1	Q06106	BST1	YFL025C	3090 nt		1.54	□□□□□ -2.16
MRD1	Q06106	tQ(UUG)E2	tQ(UUG)E2	72 nt		1.54	□□□□□ -2.16
MRD1	Q06106	SDH2	YLL041C	801 nt		1.54	□□□□□ -2.16
MRD1	Q06106	COF1	YLL050C	432 nt		1.54	□□□□□ -2.16
MRD1	Q06106	RAD50	YNL250W	3939 nt		1.54	□□□□□ -2.16
MRD1	Q06106	MVP1	YMR004W	1536 nt		1.54	□□□□□ -2.16
MRD1	Q06106	UFD2	YDL190C	2886 nt		1.53	□□□□□ -2.16
MRD1	Q06106	AI5_ALPHA	Q0070	1893 nt		1.53	□□□□□ -2.16
MRD1	Q06106	NOC3	YLR002C	1992 nt		1.53	□□□□□ -2.16
MRD1	Q06106	YLR140W	YLR140W	327 nt		1.53	□□□□□ -2.16
MRD1	Q06106	SPC98	YNL126W	2541 nt		1.53	□□□□□ -2.16
MRD1	Q06106	snR36	snR36	182 nt		1.53	□□□□□ -2.16
MRD1	Q06106	HKR1	YDR420W	5409 nt		1.53	□□□□□ -2.17
MRD1	Q06106	APL2	YKL135C	2181 nt		1.52	□□□□□ -2.17
MRD1	Q06106	YDR413C	YDR413C	576 nt		1.52	□□□□□ -2.17
MRD1	Q06106	YKL118W	YKL118W	312 nt		1.52	□□□□□ -2.17
MRD1	Q06106	RPL38	YLR325C	237 nt		1.52	□□□□□ -2.17
MRD1	Q06106	YML007C-A	YML007C-A	111 nt		1.52	□□□□□ -2.17
MRD1	Q06106	YOR376W	YOR376W	369 nt		1.52	□□□□□ -2.17
MRD1	Q06106	SMC4	YLR086W	4257 nt		1.52	□□□□□ -2.17
MRD1	Q06106	INP2	YMR163C	2118 nt		1.52	□□□□□ -2.17
MRD1	Q06106	ALK1	YGL021W	2283 nt		1.51	□□□□□ -2.17
MRD1	Q06106	ZIP2	YGL249W	2115 nt		1.51	□□□□□ -2.17
MRD1	Q06106	SEC21	YNL287W	2808 nt		1.51	□□□□□ -2.17
MRD1	Q06106	RIM20	YOR275C	1986 nt		1.51	□□□□□ -2.17
MRD1	Q06106	ENV11	YGR071C	2583 nt		1.51	□□□□□ -2.17
MRD1	Q06106	snR72	snR72	98 nt		1.51	□□□□□ -2.17
MRD1	Q06106	YDR426C	YDR426C	378 nt		1.51	□□□□□ -2.17
MRD1	Q06106	YOR108C-A	YOR108C-A	210 nt		1.51	□□□□□ -2.17
MRD1	Q06106	YDR182W-A	YDR182W-A	204 nt		1.5	□□□□□ -2.17
MRD1	Q06106	YFL032W	YFL032W	321 nt		1.5	□□□□□ -2.17
MRD1	Q06106	YHR007C-A	YHR007C-A	216 nt		1.5	□□□□□ -2.17
MRD1	Q06106	YMR242W-A	YMR242W-A	90 nt		1.5	□□□□□ -2.17
MRD1	Q06106	YLL054C	YLL054C	2532 nt		1.49	□□□□□ -2.17
MRD1	Q06106	YDR048C	YDR048C	315 nt		1.49	□□□□□ -2.17
MRD1	Q06106	HTB2	YBL002W	396 nt		1.49	□□□□□ -2.17
MRD1	Q06106	YMR175W-A	YMR175W-A	195 nt		1.49	□□□□□ -2.17
MRD1	Q06106	SLX4	YLR135W	2247 nt		1.48	□□□□□ -2.17
MRD1	Q06106	VPS54	YDR027C	2670 nt		1.48	□□□□□ -2.17
MRD1	Q06106	YER097W	YER097W	330 nt		1.48	□□□□□ -2.17
MRD1	Q06106	YGL217C	YGL217C	342 nt		1.48	□□□□□ -2.17
MRD1	Q06106	VPS55	YJR044C	423 nt		1.48	□□□□□ -2.17
MRD1	Q06106	PCC1	YKR095W-A	267 nt		1.48	□□□□□ -2.17
MRD1	Q06106	YOR199W	YOR199W	330 nt		1.48	□□□□□ -2.17
MRD1	Q06106	YPR002C-A	YPR002C-A	198 nt		1.48	□□□□□ -2.17
MRD1	Q06106	YOL160W	YOL160W	342 nt		1.47	□□□□□ -2.17
MRD1	Q06106	YSY6	YBR162W-A	198 nt		1.47	□□□□□ -2.17
MRD1	Q06106	YNL284C-B	YNL284C-B	5268 nt		1.47	□□□□□ -2.17
MRD1	Q06106	KAP122	YGL016W	3246 nt		1.46	□□□□□ -2.18
MRD1	Q06106	NPC2	YDL046W	522 nt		1.46	□□□□□ -2.18
MRD1	Q06106	YAR029W	YAR029W	225 nt		1.46	□□□□□ -2.18
MRD1	Q06106	YNL146W	YNL146W	303 nt		1.46	□□□□□ -2.18
MRD1	Q06106	SCW11	YGL028C	1629 nt		1.46	□□□□□ -2.18
MRD1	Q06106	TAR1	YLR154W-C	375 nt		1.45	□□□□□ -2.18
MRD1	Q06106	YMR290W-A	YMR290W-A	348 nt		1.45	□□□□□ -2.18
MRD1	Q06106	PBY1	YBR094W	2262 nt		1.45	□□□□□ -2.18
MRD1	Q06106	NUT1	YGL151W	3399 nt		1.44	□□□□□ -2.18
MRD1	Q06106	YDR169C-A	YDR169C-A	150 nt		1.44	□□□□□ -2.18
MRD1	Q06106	YJL015C	YJL015C	285 nt		1.43	□□□□□ -2.18
MRD1	Q06106	TRM732	YMR259C	4263 nt		1.43	□□□□□ -2.18
MRD1	Q06106	EST2	YLR318W	2655 nt		1.43	□□□□□ -2.18
MRD1	Q06106	TTI1	YKL033W	3117 nt		1.42	□□□□□ -2.18
MRD1	Q06106	AZF1	YOR113W	2745 nt		1.42	□□□□□ -2.18
MRD1	Q06106	CDC36	YDL165W	576 nt		1.42	□□□□□ -2.18
MRD1	Q06106	YOR161W-B	YOR161W-B	261 nt		1.42	□□□□□ -2.18
MRD1	Q06106	AIM44	YPL158C	2277 nt		1.42	□□□□□ -2.18
MRD1	Q06106	SLI15	YBR156C	2097 nt		1.41	□□□□□ -2.18
MRD1	Q06106	YMR031W-A	YMR031W-A	327 nt		1.41	□□□□□ -2.18
MRD1	Q06106	RAD9	YDR217C	3930 nt		1.41	□□□□□ -2.18

Retrieved 100 of 7,029 protein–RNA pairs in 12.9 ms