Protein–RNA interactions for Protein: Q04215

TY1A-MR1, Transposon Ty1-MR1 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-MR1Q04215 YPP1YGR198W 2454 nt2.73□□□□□ -1.97
TY1A-MR1Q04215 ALK1YGL021W 2283 nt2.72□□□□□ -1.97
TY1A-MR1Q04215 YLR035C-AYLR035C-A 3468 nt2.72□□□□□ -1.97
TY1A-MR1Q04215 SNQ2YDR011W 4506 nt2.72□□□□□ -1.97
TY1A-MR1Q04215 YPL150WYPL150W 2706 nt2.71□□□□□ -1.98
TY1A-MR1Q04215 VTC3YPL019C 2508 nt2.71□□□□□ -1.98
TY1A-MR1Q04215 tM(CAU)Q2tM(CAU)Q2 78 nt2.71□□□□□ -1.98
TY1A-MR1Q04215 tQ(UUG)BtQ(UUG)B 72 nt2.71□□□□□ -1.98
TY1A-MR1Q04215 APL2YKL135C 2181 nt2.71□□□□□ -1.98
TY1A-MR1Q04215 PMR1YGL167C 2853 nt2.71□□□□□ -1.98
TY1A-MR1Q04215 ATG26YLR189C 3597 nt2.7□□□□□ -1.98
TY1A-MR1Q04215 COG6YNL041C 2520 nt2.7□□□□□ -1.98
TY1A-MR1Q04215 ACB1YGR037C 264 nt2.7□□□□□ -1.98
TY1A-MR1Q04215 YMR122W-AYMR122W-A 255 nt2.7□□□□□ -1.98
TY1A-MR1Q04215 YBL100W-CYBL100W-C 120 nt2.7□□□□□ -1.98
TY1A-MR1Q04215 DCP2YNL118C 2913 nt2.7□□□□□ -1.98
TY1A-MR1Q04215 FLO5YHR211W 3228 nt2.7□□□□□ -1.98
TY1A-MR1Q04215 MET6YER091C 2304 nt2.69□□□□□ -1.98
TY1A-MR1Q04215 UBP1YDL122W 2430 nt2.69□□□□□ -1.98
TY1A-MR1Q04215 BIR1YJR089W 2865 nt2.69□□□□□ -1.98
TY1A-MR1Q04215 YGR109W-BYGR109W-B 4644 nt2.68□□□□□ -1.98
TY1A-MR1Q04215 NMD2YHR077C 3270 nt2.68□□□□□ -1.98
TY1A-MR1Q04215 BFR2YDR299W 1605 nt2.68□□□□□ -1.98
TY1A-MR1Q04215 FLO1YAR050W 4614 nt2.67□□□□□ -1.98
TY1A-MR1Q04215 NET1YJL076W 3570 nt2.67□□□□□ -1.98
TY1A-MR1Q04215 TFC4YGR047C 3078 nt2.67□□□□□ -1.98
TY1A-MR1Q04215 DSE4YNR067C 3354 nt2.66□□□□□ -1.98
TY1A-MR1Q04215 RGR1YLR071C 3249 nt2.66□□□□□ -1.98
TY1A-MR1Q04215 YGR240C-AYGR240C-A 201 nt2.66□□□□□ -1.98
TY1A-MR1Q04215 TAH1YCR060W 336 nt2.65□□□□□ -1.99
TY1A-MR1Q04215 YAL042C-AYAL042C-A 378 nt2.65□□□□□ -1.99
TY1A-MR1Q04215 YMR175W-AYMR175W-A 195 nt2.65□□□□□ -1.99
TY1A-MR1Q04215 KAP120YPL125W 3099 nt2.65□□□□□ -1.99
TY1A-MR1Q04215 MOT1YPL082C 5604 nt2.65□□□□□ -1.99
TY1A-MR1Q04215 AKR1YDR264C 2295 nt2.65□□□□□ -1.99
TY1A-MR1Q04215 UBP15YMR304W 3693 nt2.64□□□□□ -1.99
TY1A-MR1Q04215 SMC2YFR031C 3513 nt2.64□□□□□ -1.99
TY1A-MR1Q04215 tK(UUU)DtK(UUU)D 73 nt2.64□□□□□ -1.99
TY1A-MR1Q04215 tK(UUU)G1tK(UUU)G1 73 nt2.64□□□□□ -1.99
TY1A-MR1Q04215 tK(UUU)G2tK(UUU)G2 73 nt2.64□□□□□ -1.99
TY1A-MR1Q04215 tK(UUU)KtK(UUU)K 73 nt2.64□□□□□ -1.99
TY1A-MR1Q04215 tK(UUU)LtK(UUU)L 73 nt2.64□□□□□ -1.99
TY1A-MR1Q04215 tK(UUU)OtK(UUU)O 73 nt2.64□□□□□ -1.99
TY1A-MR1Q04215 tK(UUU)PtK(UUU)P 73 nt2.64□□□□□ -1.99
TY1A-MR1Q04215 YOL164W-AYOL164W-A 183 nt2.64□□□□□ -1.99
TY1A-MR1Q04215 CDC53YDL132W 2448 nt2.64□□□□□ -1.99
TY1A-MR1Q04215 MDM1YML104C 3384 nt2.64□□□□□ -1.99
TY1A-MR1Q04215 MMS1YPR164W 4224 nt2.63□□□□□ -1.99
TY1A-MR1Q04215 IKI3YLR384C 4050 nt2.63□□□□□ -1.99
TY1A-MR1Q04215 RPL37BYDR500C 267 nt2.63□□□□□ -1.99
TY1A-MR1Q04215 YER078W-AYER078W-A 165 nt2.63□□□□□ -1.99
TY1A-MR1Q04215 YGL123C-AYGL123C-A 231 nt2.63□□□□□ -1.99
TY1A-MR1Q04215 BPT1YLL015W 4680 nt2.63□□□□□ -1.99
TY1A-MR1Q04215 SEC1YDR164C 2175 nt2.63□□□□□ -1.99
TY1A-MR1Q04215 DYN1YKR054C 12279 nt2.62□□□□□ -1.99
TY1A-MR1Q04215 ESL1YIL151C 3357 nt2.62□□□□□ -1.99
TY1A-MR1Q04215 SDC25YLL016W 3147 nt2.62□□□□□ -1.99
TY1A-MR1Q04215 snR64snR64 101 nt2.61□□□□□ -1.99
TY1A-MR1Q04215 YDR210WYDR210W 228 nt2.61□□□□□ -1.99
TY1A-MR1Q04215 YJL127W-AYJL127W-A 117 nt2.61□□□□□ -1.99
TY1A-MR1Q04215 YGR067CYGR067C 2415 nt2.61□□□□□ -1.99
TY1A-MR1Q04215 SEC7YDR170C 6030 nt2.61□□□□□ -1.99
TY1A-MR1Q04215 PKH2YOL100W 3246 nt2.61□□□□□ -1.99
TY1A-MR1Q04215 GLG1YKR058W 1851 nt2.6□□□□□ -1.99
TY1A-MR1Q04215 YLR278CYLR278C 4026 nt2.6□□□□□ -1.99
TY1A-MR1Q04215 RPS26AYGL189C 360 nt2.6□□□□□ -1.99
TY1A-MR1Q04215 PAU11YGL261C 363 nt2.6□□□□□ -1.99
TY1A-MR1Q04215 YBR109W-AYBR109W-A 225 nt2.6□□□□□ -1.99
TY1A-MR1Q04215 SGM1YJR134C 2124 nt2.59□□□□□ -1.99
TY1A-MR1Q04215 ECM29YHL030W 5607 nt2.59□□□□□ -1.99
TY1A-MR1Q04215 snR50snR50 90 nt2.59□□□□□ -1.99
TY1A-MR1Q04215 COG4YPR105C 2586 nt2.59□□□□□ -1.99
TY1A-MR1Q04215 EAF1YDR359C 2949 nt2.59□□□□□ -1.99
TY1A-MR1Q04215 MMS22YLR320W 4365 nt2.58□□□□□ -2
TY1A-MR1Q04215 MDS3YGL197W 4464 nt2.58□□□□□ -2
TY1A-MR1Q04215 TOM1YDR457W 9807 nt2.58□□□□□ -2
TY1A-MR1Q04215 PSK1YAL017W 4071 nt2.58□□□□□ -2
TY1A-MR1Q04215 FIR1YER032W 2631 nt2.57□□□□□ -2
TY1A-MR1Q04215 MAK10YEL053C 2202 nt2.57□□□□□ -2
TY1A-MR1Q04215 VAS1YGR094W 3315 nt2.57□□□□□ -2
TY1A-MR1Q04215 MLH3YPL164C 2148 nt2.57□□□□□ -2
TY1A-MR1Q04215 IST2YBR086C 2841 nt2.56□□□□□ -2
TY1A-MR1Q04215 RTT107YHR154W 3213 nt2.56□□□□□ -2
TY1A-MR1Q04215 ISW1YBR245C 3390 nt2.56□□□□□ -2
TY1A-MR1Q04215 STE6YKL209C 3873 nt2.56□□□□□ -2
TY1A-MR1Q04215 FLO11YIR019C 4104 nt2.56□□□□□ -2
TY1A-MR1Q04215 UFD2YDL190C 2886 nt2.55□□□□□ -2
TY1A-MR1Q04215 NFT1YKR103W 3657 nt2.55□□□□□ -2
TY1A-MR1Q04215 ECM21YBL101C 3354 nt2.55□□□□□ -2
TY1A-MR1Q04215 YOR161W-AYOR161W-A 81 nt2.55□□□□□ -2
TY1A-MR1Q04215 YDL206WYDL206W 2289 nt2.54□□□□□ -2
TY1A-MR1Q04215 TAF2YCR042C 4224 nt2.54□□□□□ -2
TY1A-MR1Q04215 YKL100W-AYKL100W-A 90 nt2.54□□□□□ -2
TY1A-MR1Q04215 snR47snR47 99 nt2.54□□□□□ -2
TY1A-MR1Q04215 YIL169CYIL169C 2988 nt2.54□□□□□ -2
TY1A-MR1Q04215 RAX2YLR084C 3663 nt2.54□□□□□ -2
TY1A-MR1Q04215 RGC1YPR115W 3252 nt2.53□□□□□ -2
TY1A-MR1Q04215 SMC6YLR383W 3345 nt2.53□□□□□ -2
TY1A-MR1Q04215 PNC1YGL037C 651 nt2.53□□□□□ -2
TY1A-MR1Q04215 YLR232WYLR232W 348 nt2.53□□□□□ -2
Retrieved 100 of 7,029 protein–RNA pairs in 36 ms