Protein–RNA interactions for Protein: Q02260

SMD1, Small nuclear ribonucleoprotein Sm D1, yeastyeast

Predicted RBP Predictions only

Length 146 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SMD1Q02260 BST1YFL025C 3090 nt1.11□□□□□ -2.23
SMD1Q02260 NCA2YPR155C 1851 nt1.1□□□□□ -2.23
SMD1Q02260 RPS20YHL015W 366 nt1.1□□□□□ -2.23
SMD1Q02260 YIL102CYIL102C 306 nt1.1□□□□□ -2.23
SMD1Q02260 TMA10YLR327C 261 nt1.1□□□□□ -2.23
SMD1Q02260 YMR175W-AYMR175W-A 195 nt1.1□□□□□ -2.23
SMD1Q02260 YOR199WYOR199W 330 nt1.1□□□□□ -2.23
SMD1Q02260 TIM18YOR297C 579 nt1.1□□□□□ -2.23
SMD1Q02260 YPR197CYPR197C 564 nt1.1□□□□□ -2.23
SMD1Q02260 FIG2YCR089W 4830 nt1.1□□□□□ -2.23
SMD1Q02260 YGR109W-BYGR109W-B 4644 nt1.09□□□□□ -2.23
SMD1Q02260 ENV11YGR071C 2583 nt1.09□□□□□ -2.23
SMD1Q02260 ZIP2YGL249W 2115 nt1.09□□□□□ -2.23
SMD1Q02260 NOC3YLR002C 1992 nt1.09□□□□□ -2.23
SMD1Q02260 APL2YKL135C 2181 nt1.09□□□□□ -2.23
SMD1Q02260 YML007C-AYML007C-A 111 nt1.09□□□□□ -2.23
SMD1Q02260 YMR242W-AYMR242W-A 90 nt1.09□□□□□ -2.23
SMD1Q02260 YCL023CYCL023C 348 nt1.09□□□□□ -2.23
SMD1Q02260 INP2YMR163C 2118 nt1.09□□□□□ -2.24
SMD1Q02260 IRA1YBR140C 9279 nt1.09□□□□□ -2.24
SMD1Q02260 SCW11YGL028C 1629 nt1.08□□□□□ -2.24
SMD1Q02260 YDR426CYDR426C 378 nt1.08□□□□□ -2.24
SMD1Q02260 VPS55YJR044C 423 nt1.08□□□□□ -2.24
SMD1Q02260 snR14snR14 160 nt1.08□□□□□ -2.24
SMD1Q02260 YPR002C-AYPR002C-A 198 nt1.08□□□□□ -2.24
SMD1Q02260 KAP122YGL016W 3246 nt1.07□□□□□ -2.24
SMD1Q02260 MDS3YGL197W 4464 nt1.07□□□□□ -2.24
SMD1Q02260 NPC2YDL046W 522 nt1.06□□□□□ -2.24
SMD1Q02260 RPL35AYDL191W 363 nt1.06□□□□□ -2.24
SMD1Q02260 YHR052W-AYHR052W-A 195 nt1.06□□□□□ -2.24
SMD1Q02260 YHR054W-AYHR054W-A 195 nt1.06□□□□□ -2.24
SMD1Q02260 RPL38YLR325C 237 nt1.06□□□□□ -2.24
SMD1Q02260 YOL160WYOL160W 342 nt1.06□□□□□ -2.24
SMD1Q02260 VPS54YDR027C 2670 nt1.06□□□□□ -2.24
SMD1Q02260 MEC1YBR136W 7107 nt1.06□□□□□ -2.24
SMD1Q02260 RSM22YKL155C 1887 nt1.05□□□□□ -2.24
SMD1Q02260 RIM20YOR275C 1986 nt1.05□□□□□ -2.24
SMD1Q02260 YLL054CYLL054C 2532 nt1.05□□□□□ -2.24
SMD1Q02260 COA6YMR244C-A 315 nt1.05□□□□□ -2.24
SMD1Q02260 KIP1YBL063W 3336 nt1.05□□□□□ -2.24
SMD1Q02260 PBY1YBR094W 2262 nt1.04□□□□□ -2.24
SMD1Q02260 CDC36YDL165W 576 nt1.04□□□□□ -2.24
SMD1Q02260 YDL211CYDL211C 1119 nt1.04□□□□□ -2.24
SMD1Q02260 YJL015CYJL015C 285 nt1.04□□□□□ -2.24
SMD1Q02260 PCC1YKR095W-A 267 nt1.04□□□□□ -2.24
SMD1Q02260 YAF9YNL107W 681 nt1.04□□□□□ -2.24
SMD1Q02260 YOR108C-AYOR108C-A 210 nt1.04□□□□□ -2.24
SMD1Q02260 MAD1YGL086W 2250 nt1.04□□□□□ -2.24
SMD1Q02260 NUP188YML103C 4968 nt1.04□□□□□ -2.24
SMD1Q02260 AZF1YOR113W 2745 nt1.03□□□□□ -2.24
SMD1Q02260 HTB2YBL002W 396 nt1.03□□□□□ -2.24
SMD1Q02260 TRM732YMR259C 4263 nt1.03□□□□□ -2.25
SMD1Q02260 EST2YLR318W 2655 nt1.02□□□□□ -2.25
SMD1Q02260 tQ(UUG)E2tQ(UUG)E2 72 nt1.02□□□□□ -2.25
SMD1Q02260 YBL008W-AYBL008W-A 240 nt1.02□□□□□ -2.25
SMD1Q02260 RAD9YDR217C 3930 nt1.02□□□□□ -2.25
SMD1Q02260 LCD1YDR499W 2244 nt1.01□□□□□ -2.25
SMD1Q02260 RAD34YDR314C 2079 nt1.01□□□□□ -2.25
SMD1Q02260 MPT5YGL178W 2580 nt1.01□□□□□ -2.25
SMD1Q02260 YHR007C-AYHR007C-A 216 nt1.01□□□□□ -2.25
SMD1Q02260 MAM33YIL070C 801 nt1.01□□□□□ -2.25
SMD1Q02260 YAR029WYAR029W 225 nt1.01□□□□□ -2.25
SMD1Q02260 YPL038W-AYPL038W-A 192 nt1.01□□□□□ -2.25
SMD1Q02260 YPL225WYPL225W 441 nt1.01□□□□□ -2.25
SMD1Q02260 YSY6YBR162W-A 198 nt1.01□□□□□ -2.25
SMD1Q02260 NUT1YGL151W 3399 nt1.01□□□□□ -2.25
SMD1Q02260 SLI15YBR156C 2097 nt1.01□□□□□ -2.25
SMD1Q02260 COG4YPR105C 2586 nt1□□□□□ -2.25
SMD1Q02260 YDR048CYDR048C 315 nt1□□□□□ -2.25
SMD1Q02260 YIL020C-AYIL020C-A 339 nt1□□□□□ -2.25
SMD1Q02260 CDC25YLR310C 4770 nt1□□□□□ -2.25
SMD1Q02260 PIP2YOR363C 2991 nt0.99□□□□□ -2.25
SMD1Q02260 SPT21YMR179W 2277 nt0.99□□□□□ -2.25
SMD1Q02260 FIG4YNL325C 2640 nt0.99□□□□□ -2.25
SMD1Q02260 YDL240C-AYDL240C-A 138 nt0.99□□□□□ -2.25
SMD1Q02260 YDR102CYDR102C 333 nt0.99□□□□□ -2.25
SMD1Q02260 PFD1YJL179W 330 nt0.99□□□□□ -2.25
SMD1Q02260 YLR255CYLR255C 354 nt0.99□□□□□ -2.25
SMD1Q02260 YMR290W-AYMR290W-A 348 nt0.99□□□□□ -2.25
SMD1Q02260 SPC98YNL126W 2541 nt0.98□□□□□ -2.25
SMD1Q02260 SLD3YGL113W 2007 nt0.98□□□□□ -2.25
SMD1Q02260 AIM44YPL158C 2277 nt0.98□□□□□ -2.25
SMD1Q02260 PKH2YOL100W 3246 nt0.98□□□□□ -2.25
SMD1Q02260 YDR524W-CYDR524W-C 90 nt0.98□□□□□ -2.25
SMD1Q02260 YJR011CYJR011C 786 nt0.98□□□□□ -2.25
SMD1Q02260 AHC1YOR023C 1701 nt0.98□□□□□ -2.25
SMD1Q02260 MSN5YDR335W 3675 nt0.97□□□□□ -2.25
SMD1Q02260 YNL284C-BYNL284C-B 5268 nt0.97□□□□□ -2.25
SMD1Q02260 NIP100YPL174C 2607 nt0.97□□□□□ -2.25
SMD1Q02260 TAR1YLR154W-C 375 nt0.96□□□□□ -2.26
SMD1Q02260 CUL3YGR003W 2235 nt0.95□□□□□ -2.26
SMD1Q02260 STO1YMR125W 2586 nt0.95□□□□□ -2.26
SMD1Q02260 RPL34BYIL052C 366 nt0.95□□□□□ -2.26
SMD1Q02260 YLL020CYLL020C 306 nt0.95□□□□□ -2.26
SMD1Q02260 RRT15YLR162W-A 189 nt0.95□□□□□ -2.26
SMD1Q02260 YPR063CYPR063C 423 nt0.95□□□□□ -2.26
SMD1Q02260 snR36snR36 182 nt0.95□□□□□ -2.26
SMD1Q02260 YBR221W-AYBR221W-A 105 nt0.95□□□□□ -2.26
SMD1Q02260 TRM3YDL112W 4311 nt0.95□□□□□ -2.26
SMD1Q02260 SET3YKR029C 2256 nt0.95□□□□□ -2.26
Retrieved 100 of 7,029 protein–RNA pairs in 79.3 ms