Protein–RNA interactions for Protein: Q01649

CIK1, Spindle pole body-associated protein CIK1, yeastyeast

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CIK1Q01649 ALY2YJL084C 3141 nt1.28□□□□□ -2.2
CIK1Q01649 SEC3YER008C 4011 nt1.27□□□□□ -2.21
CIK1Q01649 EAF1YDR359C 2949 nt1.27□□□□□ -2.21
CIK1Q01649 PFD1YJL179W 330 nt1.27□□□□□ -2.21
CIK1Q01649 YMR242W-AYMR242W-A 90 nt1.27□□□□□ -2.21
CIK1Q01649 CDC25YLR310C 4770 nt1.26□□□□□ -2.21
CIK1Q01649 STB6YKL072W 2301 nt1.26□□□□□ -2.21
CIK1Q01649 NUP145YGL092W 3954 nt1.26□□□□□ -2.21
CIK1Q01649 RPL26AYLR344W 384 nt1.26□□□□□ -2.21
CIK1Q01649 YBR012CYBR012C 420 nt1.26□□□□□ -2.21
CIK1Q01649 YPL185WYPL185W 396 nt1.26□□□□□ -2.21
CIK1Q01649 NPC2YDL046W 522 nt1.25□□□□□ -2.21
CIK1Q01649 YKL083WYKL083W 615 nt1.25□□□□□ -2.21
CIK1Q01649 RRT1YBL048W 312 nt1.25□□□□□ -2.21
CIK1Q01649 ZIP2YGL249W 2115 nt1.25□□□□□ -2.21
CIK1Q01649 SPC98YNL126W 2541 nt1.25□□□□□ -2.21
CIK1Q01649 ISF1YMR081C 1017 nt1.24□□□□□ -2.21
CIK1Q01649 YNL324WYNL324W 396 nt1.24□□□□□ -2.21
CIK1Q01649 RAD9YDR217C 3930 nt1.23□□□□□ -2.21
CIK1Q01649 PCF11YDR228C 1881 nt1.23□□□□□ -2.21
CIK1Q01649 YOR108C-AYOR108C-A 210 nt1.23□□□□□ -2.21
CIK1Q01649 RPB10YOR210W 213 nt1.23□□□□□ -2.21
CIK1Q01649 SET3YKR029C 2256 nt1.23□□□□□ -2.21
CIK1Q01649 AIM44YPL158C 2277 nt1.23□□□□□ -2.21
CIK1Q01649 LCD1YDR499W 2244 nt1.23□□□□□ -2.21
CIK1Q01649 YHL041WYHL041W 450 nt1.22□□□□□ -2.21
CIK1Q01649 snR51snR51 107 nt1.22□□□□□ -2.21
CIK1Q01649 SLI15YBR156C 2097 nt1.22□□□□□ -2.21
CIK1Q01649 YJR029WYJR029W 5268 nt1.21□□□□□ -2.22
CIK1Q01649 YPR137C-BYPR137C-B 5268 nt1.21□□□□□ -2.22
CIK1Q01649 YJL135WYJL135W 318 nt1.21□□□□□ -2.22
CIK1Q01649 YOL160WYOL160W 342 nt1.21□□□□□ -2.22
CIK1Q01649 PRM3YPL192C 402 nt1.21□□□□□ -2.22
CIK1Q01649 YBR221W-AYBR221W-A 105 nt1.21□□□□□ -2.22
CIK1Q01649 YJR003CYJR003C 1560 nt1.21□□□□□ -2.22
CIK1Q01649 NST1YNL091W 3723 nt1.2□□□□□ -2.22
CIK1Q01649 YGR174W-AYGR174W-A 87 nt1.2□□□□□ -2.22
CIK1Q01649 YLR434CYLR434C 384 nt1.2□□□□□ -2.22
CIK1Q01649 YOR199WYOR199W 330 nt1.2□□□□□ -2.22
CIK1Q01649 YPL261CYPL261C 309 nt1.2□□□□□ -2.22
CIK1Q01649 SLD3YGL113W 2007 nt1.2□□□□□ -2.22
CIK1Q01649 MMS4YBR098W 2076 nt1.19□□□□□ -2.22
CIK1Q01649 YMR290W-AYMR290W-A 348 nt1.19□□□□□ -2.22
CIK1Q01649 RPL33BYOR234C 324 nt1.19□□□□□ -2.22
CIK1Q01649 snR72snR72 98 nt1.18□□□□□ -2.22
CIK1Q01649 YLR264C-AYLR264C-A 117 nt1.18□□□□□ -2.22
CIK1Q01649 YNL058CYNL058C 951 nt1.18□□□□□ -2.22
CIK1Q01649 COG4YPR105C 2586 nt1.18□□□□□ -2.22
CIK1Q01649 FIG4YNL325C 2640 nt1.18□□□□□ -2.22
CIK1Q01649 PDE2YOR360C 1581 nt1.17□□□□□ -2.22
CIK1Q01649 STO1YMR125W 2586 nt1.17□□□□□ -2.22
CIK1Q01649 MSH3YCR092C 3057 nt1.17□□□□□ -2.22
CIK1Q01649 VAM6YDL077C 3150 nt1.16□□□□□ -2.22
CIK1Q01649 YBR200W-AYBR200W-A 165 nt1.16□□□□□ -2.22
CIK1Q01649 INP2YMR163C 2118 nt1.16□□□□□ -2.22
CIK1Q01649 NUP157YER105C 4176 nt1.16□□□□□ -2.22
CIK1Q01649 tH(GUG)E1tH(GUG)E1 72 nt1.15□□□□□ -2.23
CIK1Q01649 tH(GUG)E2tH(GUG)E2 72 nt1.15□□□□□ -2.23
CIK1Q01649 tH(GUG)G1tH(GUG)G1 72 nt1.15□□□□□ -2.23
CIK1Q01649 tH(GUG)G2tH(GUG)G2 72 nt1.15□□□□□ -2.23
CIK1Q01649 tH(GUG)HtH(GUG)H 72 nt1.15□□□□□ -2.23
CIK1Q01649 tH(GUG)KtH(GUG)K 72 nt1.15□□□□□ -2.23
CIK1Q01649 tH(GUG)MtH(GUG)M 72 nt1.15□□□□□ -2.23
CIK1Q01649 AGA2YGL032C 264 nt1.15□□□□□ -2.23
CIK1Q01649 RPL34BYIL052C 366 nt1.15□□□□□ -2.23
CIK1Q01649 RAD34YDR314C 2079 nt1.14□□□□□ -2.23
CIK1Q01649 ATG31YDR022C 591 nt1.14□□□□□ -2.23
CIK1Q01649 YER079WYER079W 633 nt1.14□□□□□ -2.23
CIK1Q01649 IFH1YLR223C 3258 nt1.13□□□□□ -2.23
CIK1Q01649 SWF1YDR126W 1011 nt1.13□□□□□ -2.23
CIK1Q01649 APL1YJR005W 2103 nt1.13□□□□□ -2.23
CIK1Q01649 PAN2YGL094C 3348 nt1.12□□□□□ -2.23
CIK1Q01649 LAA1YJL207C 6045 nt1.12□□□□□ -2.23
CIK1Q01649 YGR042WYGR042W 816 nt1.12□□□□□ -2.23
CIK1Q01649 PAC1YOR269W 1485 nt1.12□□□□□ -2.23
CIK1Q01649 TTI1YKL033W 3117 nt1.11□□□□□ -2.23
CIK1Q01649 BUD3YCL014W 4911 nt1.11□□□□□ -2.23
CIK1Q01649 YGR130CYGR130C 2451 nt1.11□□□□□ -2.23
CIK1Q01649 NIP100YPL174C 2607 nt1.1□□□□□ -2.23
CIK1Q01649 GPG1YGL121C 381 nt1.1□□□□□ -2.23
CIK1Q01649 RPS20YHL015W 366 nt1.1□□□□□ -2.23
CIK1Q01649 RPL38YLR325C 237 nt1.1□□□□□ -2.23
CIK1Q01649 YBR285WYBR285W 435 nt1.1□□□□□ -2.23
CIK1Q01649 YDL206WYDL206W 2289 nt1.09□□□□□ -2.23
CIK1Q01649 BSC3YLR465C 309 nt1.09□□□□□ -2.23
CIK1Q01649 YAR009CYAR009C 3591 nt1.08□□□□□ -2.24
CIK1Q01649 YHR138CYHR138C 345 nt1.08□□□□□ -2.24
CIK1Q01649 YIR044CYIR044C 186 nt1.08□□□□□ -2.24
CIK1Q01649 YLR222C-AYLR222C-A 231 nt1.08□□□□□ -2.24
CIK1Q01649 YML007C-AYML007C-A 111 nt1.08□□□□□ -2.24
CIK1Q01649 IRC23YOR044W 474 nt1.08□□□□□ -2.24
CIK1Q01649 PKH2YOL100W 3246 nt1.08□□□□□ -2.24
CIK1Q01649 KAP120YPL125W 3099 nt1.08□□□□□ -2.24
CIK1Q01649 YMR001C-AYMR001C-A 231 nt1.07□□□□□ -2.24
CIK1Q01649 YOR053WYOR053W 342 nt1.07□□□□□ -2.24
CIK1Q01649 YOR072W-AYOR072W-A 249 nt1.07□□□□□ -2.24
CIK1Q01649 YPR002C-AYPR002C-A 198 nt1.07□□□□□ -2.24
CIK1Q01649 EMT1tM(CAU)D 73 nt1.06□□□□□ -2.24
CIK1Q01649 EMT5tM(CAU)J1 73 nt1.06□□□□□ -2.24
CIK1Q01649 EMT3tM(CAU)J2 73 nt1.06□□□□□ -2.24
Retrieved 100 of 7,029 protein–RNA pairs in 27.1 ms