Protein–RNA interactions for Protein: P54787

VPS9, Vacuolar protein sorting-associated protein 9, yeastyeast

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS9P54787 YKL202WYKL202W 582 nt1.24□□□□□ -2.21
VPS9P54787 YBR221W-AYBR221W-A 105 nt1.24□□□□□ -2.21
VPS9P54787 YAP6YDR259C 1152 nt1.23□□□□□ -2.21
VPS9P54787 YIL020C-AYIL020C-A 339 nt1.23□□□□□ -2.21
VPS9P54787 RPL26AYLR344W 384 nt1.23□□□□□ -2.21
VPS9P54787 SET3YKR029C 2256 nt1.22□□□□□ -2.21
VPS9P54787 NPC2YDL046W 522 nt1.22□□□□□ -2.21
VPS9P54787 YKL083WYKL083W 615 nt1.22□□□□□ -2.21
VPS9P54787 YAR047CYAR047C 321 nt1.22□□□□□ -2.21
VPS9P54787 YML003WYML003W 873 nt1.22□□□□□ -2.21
VPS9P54787 YMR242W-AYMR242W-A 90 nt1.22□□□□□ -2.21
VPS9P54787 YPL068CYPL068C 882 nt1.22□□□□□ -2.21
VPS9P54787 YPL229WYPL229W 621 nt1.22□□□□□ -2.21
VPS9P54787 SAC3YDR159W 3906 nt1.22□□□□□ -2.21
VPS9P54787 SLD3YGL113W 2007 nt1.22□□□□□ -2.21
VPS9P54787 ZIP2YGL249W 2115 nt1.21□□□□□ -2.22
VPS9P54787 tV(UAC)BtV(UAC)B 74 nt1.21□□□□□ -2.22
VPS9P54787 tV(UAC)DtV(UAC)D 74 nt1.21□□□□□ -2.22
VPS9P54787 RPS24BYIL069C 408 nt1.21□□□□□ -2.22
VPS9P54787 RRT1YBL048W 312 nt1.21□□□□□ -2.22
VPS9P54787 YBR012CYBR012C 420 nt1.21□□□□□ -2.22
VPS9P54787 RPB10YOR210W 213 nt1.21□□□□□ -2.22
VPS9P54787 FIG4YNL325C 2640 nt1.21□□□□□ -2.22
VPS9P54787 LCD1YDR499W 2244 nt1.21□□□□□ -2.22
VPS9P54787 NUP145YGL092W 3954 nt1.21□□□□□ -2.22
VPS9P54787 SEC3YER008C 4011 nt1.2□□□□□ -2.22
VPS9P54787 snR72snR72 98 nt1.2□□□□□ -2.22
VPS9P54787 AIM44YPL158C 2277 nt1.2□□□□□ -2.22
VPS9P54787 YJR003CYJR003C 1560 nt1.2□□□□□ -2.22
VPS9P54787 SLI15YBR156C 2097 nt1.19□□□□□ -2.22
VPS9P54787 PCF11YDR228C 1881 nt1.19□□□□□ -2.22
VPS9P54787 YHL041WYHL041W 450 nt1.19□□□□□ -2.22
VPS9P54787 SIP4YJL089W 2490 nt1.19□□□□□ -2.22
VPS9P54787 ISF1YMR081C 1017 nt1.19□□□□□ -2.22
VPS9P54787 YPL205CYPL205C 345 nt1.19□□□□□ -2.22
VPS9P54787 STO1YMR125W 2586 nt1.18□□□□□ -2.22
VPS9P54787 YDR169C-AYDR169C-A 150 nt1.18□□□□□ -2.22
VPS9P54787 YLR406C-AYLR406C-A 150 nt1.18□□□□□ -2.22
VPS9P54787 ALY2YJL084C 3141 nt1.17□□□□□ -2.22
VPS9P54787 YJL135WYJL135W 318 nt1.17□□□□□ -2.22
VPS9P54787 YOL159CYOL159C 516 nt1.17□□□□□ -2.22
VPS9P54787 snR51snR51 107 nt1.17□□□□□ -2.22
VPS9P54787 SPT7YBR081C 3999 nt1.16□□□□□ -2.22
VPS9P54787 YOR199WYOR199W 330 nt1.16□□□□□ -2.22
VPS9P54787 TTI1YKL033W 3117 nt1.16□□□□□ -2.22
VPS9P54787 COG4YPR105C 2586 nt1.15□□□□□ -2.22
VPS9P54787 YLR434CYLR434C 384 nt1.15□□□□□ -2.23
VPS9P54787 MMS4YBR098W 2076 nt1.15□□□□□ -2.23
VPS9P54787 Q0144Q0144 330 nt1.14□□□□□ -2.23
VPS9P54787 APL1YJR005W 2103 nt1.14□□□□□ -2.23
VPS9P54787 YOR032W-AYOR032W-A 201 nt1.14□□□□□ -2.23
VPS9P54787 YOR108C-AYOR108C-A 210 nt1.14□□□□□ -2.23
VPS9P54787 PDE2YOR360C 1581 nt1.13□□□□□ -2.23
VPS9P54787 YJR157WYJR157W 363 nt1.13□□□□□ -2.23
VPS9P54787 YOL160WYOL160W 342 nt1.13□□□□□ -2.23
VPS9P54787 IRC23YOR044W 474 nt1.13□□□□□ -2.23
VPS9P54787 PRM3YPL192C 402 nt1.13□□□□□ -2.23
VPS9P54787 YBR200W-AYBR200W-A 165 nt1.13□□□□□ -2.23
VPS9P54787 YKL063CYKL063C 504 nt1.12□□□□□ -2.23
VPS9P54787 YPL261CYPL261C 309 nt1.12□□□□□ -2.23
VPS9P54787 YJR029WYJR029W 5268 nt1.11□□□□□ -2.23
VPS9P54787 YPR137C-BYPR137C-B 5268 nt1.11□□□□□ -2.23
VPS9P54787 EMT1tM(CAU)D 73 nt1.11□□□□□ -2.23
VPS9P54787 EMT5tM(CAU)J1 73 nt1.11□□□□□ -2.23
VPS9P54787 EMT3tM(CAU)J2 73 nt1.11□□□□□ -2.23
VPS9P54787 EMT4tM(CAU)M 73 nt1.11□□□□□ -2.23
VPS9P54787 EMT2tM(CAU)O2 73 nt1.11□□□□□ -2.23
VPS9P54787 YGR174W-AYGR174W-A 87 nt1.11□□□□□ -2.23
VPS9P54787 YPL185WYPL185W 396 nt1.11□□□□□ -2.23
VPS9P54787 YDL206WYDL206W 2289 nt1.1□□□□□ -2.23
VPS9P54787 NUP157YER105C 4176 nt1.1□□□□□ -2.23
VPS9P54787 YMR290W-AYMR290W-A 348 nt1.1□□□□□ -2.23
VPS9P54787 RAD34YDR314C 2079 nt1.09□□□□□ -2.23
VPS9P54787 INP2YMR163C 2118 nt1.09□□□□□ -2.23
VPS9P54787 NST1YNL091W 3723 nt1.09□□□□□ -2.23
VPS9P54787 YGR042WYGR042W 816 nt1.09□□□□□ -2.23
VPS9P54787 PAC1YOR269W 1485 nt1.09□□□□□ -2.24
VPS9P54787 YNL058CYNL058C 951 nt1.08□□□□□ -2.24
VPS9P54787 VAM6YDL077C 3150 nt1.08□□□□□ -2.24
VPS9P54787 YAR009CYAR009C 3591 nt1.07□□□□□ -2.24
VPS9P54787 WAR1YML076C 2835 nt1.06□□□□□ -2.24
VPS9P54787 ATG31YDR022C 591 nt1.06□□□□□ -2.24
VPS9P54787 YER079WYER079W 633 nt1.06□□□□□ -2.24
VPS9P54787 YBL008W-AYBL008W-A 240 nt1.06□□□□□ -2.24
VPS9P54787 VPS20YMR077C 666 nt1.06□□□□□ -2.24
VPS9P54787 PKH2YOL100W 3246 nt1.06□□□□□ -2.24
VPS9P54787 IFH1YLR223C 3258 nt1.06□□□□□ -2.24
VPS9P54787 AGA2YGL032C 264 nt1.05□□□□□ -2.24
VPS9P54787 GPG1YGL121C 381 nt1.05□□□□□ -2.24
VPS9P54787 RPS20YHL015W 366 nt1.05□□□□□ -2.24
VPS9P54787 YNL324WYNL324W 396 nt1.05□□□□□ -2.24
VPS9P54787 KAP120YPL125W 3099 nt1.04□□□□□ -2.24
VPS9P54787 SWF1YDR126W 1011 nt1.04□□□□□ -2.24
VPS9P54787 RPL34BYIL052C 366 nt1.03□□□□□ -2.24
VPS9P54787 ROM2YLR371W 4071 nt1.03□□□□□ -2.24
VPS9P54787 GEA2YEL022W 4380 nt1.02□□□□□ -2.25
VPS9P54787 YDL196WYDL196W 330 nt1.02□□□□□ -2.25
VPS9P54787 YLR264C-AYLR264C-A 117 nt1.02□□□□□ -2.25
VPS9P54787 RPL38YLR325C 237 nt1.02□□□□□ -2.25
VPS9P54787 CLU1YMR012W 3834 nt1.01□□□□□ -2.25
Retrieved 100 of 7,029 protein–RNA pairs in 26.7 ms