Protein–RNA interactions for Protein: P53950

VAC7, Vacuolar segregation protein 7, yeastyeast

Predictions only

Length 1,165 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VAC7P53950 NST1YNL091W 3723 nt1.32□□□□□ -2.2
VAC7P53950 YGR035CYGR035C 351 nt1.31□□□□□ -2.2
VAC7P53950 YHL046W-AYHL046W-A 327 nt1.31□□□□□ -2.2
VAC7P53950 YAR053WYAR053W 297 nt1.31□□□□□ -2.2
VAC7P53950 YBR012CYBR012C 420 nt1.31□□□□□ -2.2
VAC7P53950 RPB10YOR210W 213 nt1.31□□□□□ -2.2
VAC7P53950 YLL032CYLL032C 2478 nt1.31□□□□□ -2.2
VAC7P53950 SEC5YDR166C 2916 nt1.3□□□□□ -2.2
VAC7P53950 DGR2YKL121W 2559 nt1.3□□□□□ -2.2
VAC7P53950 PAU2YEL049W 363 nt1.3□□□□□ -2.2
VAC7P53950 YAL063C-AYAL063C-A 291 nt1.3□□□□□ -2.2
VAC7P53950 YNL058CYNL058C 951 nt1.3□□□□□ -2.2
VAC7P53950 YOR072W-AYOR072W-A 249 nt1.3□□□□□ -2.2
VAC7P53950 NUT2YPR168W 474 nt1.3□□□□□ -2.2
VAC7P53950 TTI1YKL033W 3117 nt1.3□□□□□ -2.2
VAC7P53950 ROM2YLR371W 4071 nt1.3□□□□□ -2.2
VAC7P53950 SAS3YBL052C 2496 nt1.29□□□□□ -2.2
VAC7P53950 snR51snR51 107 nt1.29□□□□□ -2.2
VAC7P53950 MUK1YPL070W 1839 nt1.29□□□□□ -2.2
VAC7P53950 RSM22YKL155C 1887 nt1.29□□□□□ -2.2
VAC7P53950 ATP6Q0085 780 nt1.28□□□□□ -2.2
VAC7P53950 YJL022WYJL022W 309 nt1.28□□□□□ -2.2
VAC7P53950 SMC4YLR086W 4257 nt1.28□□□□□ -2.2
VAC7P53950 AI5_ALPHAQ0070 1893 nt1.28□□□□□ -2.2
VAC7P53950 KAP122YGL016W 3246 nt1.28□□□□□ -2.21
VAC7P53950 RAD50YNL250W 3939 nt1.27□□□□□ -2.21
VAC7P53950 CDC36YDL165W 576 nt1.27□□□□□ -2.21
VAC7P53950 tR(ACG)Q2tR(ACG)Q2 74 nt1.27□□□□□ -2.21
VAC7P53950 BIL1YOR304C-A 231 nt1.27□□□□□ -2.21
VAC7P53950 SGO1YOR073W 1773 nt1.26□□□□□ -2.21
VAC7P53950 tW(UCA)QtW(UCA)Q 74 nt1.26□□□□□ -2.21
VAC7P53950 COF1YLL050C 432 nt1.26□□□□□ -2.21
VAC7P53950 YPR197CYPR197C 564 nt1.26□□□□□ -2.21
VAC7P53950 PIG1YLR273C 1947 nt1.26□□□□□ -2.21
VAC7P53950 ALK1YGL021W 2283 nt1.26□□□□□ -2.21
VAC7P53950 EMC5YIL027C 426 nt1.25□□□□□ -2.21
VAC7P53950 SDH2YLL041C 801 nt1.25□□□□□ -2.21
VAC7P53950 YPR016W-AYPR016W-A 261 nt1.25□□□□□ -2.21
VAC7P53950 EST2YLR318W 2655 nt1.25□□□□□ -2.21
VAC7P53950 YAR009CYAR009C 3591 nt1.25□□□□□ -2.21
VAC7P53950 MVP1YMR004W 1536 nt1.25□□□□□ -2.21
VAC7P53950 NCA2YPR155C 1851 nt1.24□□□□□ -2.21
VAC7P53950 TRM732YMR259C 4263 nt1.24□□□□□ -2.21
VAC7P53950 snR72snR72 98 nt1.24□□□□□ -2.21
VAC7P53950 YIL020C-AYIL020C-A 339 nt1.24□□□□□ -2.21
VAC7P53950 YJL015CYJL015C 285 nt1.24□□□□□ -2.21
VAC7P53950 YJL135WYJL135W 318 nt1.24□□□□□ -2.21
VAC7P53950 YML007C-AYML007C-A 111 nt1.24□□□□□ -2.21
VAC7P53950 UFD2YDL190C 2886 nt1.23□□□□□ -2.21
VAC7P53950 YDR182W-AYDR182W-A 204 nt1.23□□□□□ -2.21
VAC7P53950 TIM18YOR297C 579 nt1.23□□□□□ -2.21
VAC7P53950 YOR376WYOR376W 369 nt1.23□□□□□ -2.21
VAC7P53950 ZIP2YGL249W 2115 nt1.22□□□□□ -2.21
VAC7P53950 INP2YMR163C 2118 nt1.22□□□□□ -2.21
VAC7P53950 SLX4YLR135W 2247 nt1.22□□□□□ -2.21
VAC7P53950 NOC3YLR002C 1992 nt1.22□□□□□ -2.21
VAC7P53950 CSN9YDR179C 489 nt1.22□□□□□ -2.21
VAC7P53950 YDR426CYDR426C 378 nt1.22□□□□□ -2.21
VAC7P53950 YGL217CYGL217C 342 nt1.22□□□□□ -2.21
VAC7P53950 VPS55YJR044C 423 nt1.22□□□□□ -2.21
VAC7P53950 RPL40BYKR094C 387 nt1.22□□□□□ -2.21
VAC7P53950 YMR242W-AYMR242W-A 90 nt1.22□□□□□ -2.21
VAC7P53950 RPL33BYOR234C 324 nt1.22□□□□□ -2.21
VAC7P53950 APL2YKL135C 2181 nt1.22□□□□□ -2.21
VAC7P53950 RPS20YHL015W 366 nt1.21□□□□□ -2.22
VAC7P53950 RRT15YLR162W-A 189 nt1.21□□□□□ -2.22
VAC7P53950 YMR175W-AYMR175W-A 195 nt1.21□□□□□ -2.22
VAC7P53950 YOR199WYOR199W 330 nt1.21□□□□□ -2.22
VAC7P53950 SPO75YLL005C 2607 nt1.2□□□□□ -2.22
VAC7P53950 CLU1YMR012W 3834 nt1.2□□□□□ -2.22
VAC7P53950 ENV11YGR071C 2583 nt1.2□□□□□ -2.22
VAC7P53950 COG4YPR105C 2586 nt1.2□□□□□ -2.22
VAC7P53950 RPL38YLR325C 237 nt1.2□□□□□ -2.22
VAC7P53950 YPR002C-AYPR002C-A 198 nt1.2□□□□□ -2.22
VAC7P53950 RIM20YOR275C 1986 nt1.19□□□□□ -2.22
VAC7P53950 SCW11YGL028C 1629 nt1.19□□□□□ -2.22
VAC7P53950 YLL054CYLL054C 2532 nt1.19□□□□□ -2.22
VAC7P53950 VPS54YDR027C 2670 nt1.19□□□□□ -2.22
VAC7P53950 YDR169C-AYDR169C-A 150 nt1.19□□□□□ -2.22
VAC7P53950 PCC1YKR095W-A 267 nt1.19□□□□□ -2.22
VAC7P53950 YSY6YBR162W-A 198 nt1.19□□□□□ -2.22
VAC7P53950 YNL284C-BYNL284C-B 5268 nt1.18□□□□□ -2.22
VAC7P53950 NPC2YDL046W 522 nt1.18□□□□□ -2.22
VAC7P53950 tV(UAC)BtV(UAC)B 74 nt1.18□□□□□ -2.22
VAC7P53950 tV(UAC)DtV(UAC)D 74 nt1.18□□□□□ -2.22
VAC7P53950 YOL160WYOL160W 342 nt1.18□□□□□ -2.22
VAC7P53950 YOR108C-AYOR108C-A 210 nt1.18□□□□□ -2.22
VAC7P53950 YPL038W-AYPL038W-A 192 nt1.18□□□□□ -2.22
VAC7P53950 RAD9YDR217C 3930 nt1.18□□□□□ -2.22
VAC7P53950 MDS3YGL197W 4464 nt1.17□□□□□ -2.22
VAC7P53950 YCS4YLR272C 3531 nt1.17□□□□□ -2.22
VAC7P53950 RPL35AYDL191W 363 nt1.17□□□□□ -2.22
VAC7P53950 snR14snR14 160 nt1.17□□□□□ -2.22
VAC7P53950 HTB2YBL002W 396 nt1.16□□□□□ -2.22
VAC7P53950 NUT1YGL151W 3399 nt1.16□□□□□ -2.22
VAC7P53950 YDL211CYDL211C 1119 nt1.15□□□□□ -2.23
VAC7P53950 YAF9YNL107W 681 nt1.15□□□□□ -2.23
VAC7P53950 AZF1YOR113W 2745 nt1.15□□□□□ -2.23
VAC7P53950 YDL240C-AYDL240C-A 138 nt1.14□□□□□ -2.23
VAC7P53950 YMR290W-AYMR290W-A 348 nt1.14□□□□□ -2.23
Retrieved 100 of 7,029 protein–RNA pairs in 65.9 ms