Protein–RNA interactions for Protein: P47111

VPS55, Vacuolar protein sorting-associated protein 55, yeastyeast

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS55P47111 RPC10YHR143W-A 213 nt-0.04□□□□□ -2.42
VPS55P47111 YOL106WYOL106W 354 nt-0.04□□□□□ -2.42
VPS55P47111 snR190snR190 190 nt-0.04□□□□□ -2.42
VPS55P47111 VIK1YPL253C 1944 nt-0.05□□□□□ -2.42
VPS55P47111 MLP1YKR095W 5628 nt-0.05□□□□□ -2.42
VPS55P47111 FYV10YIL097W 1551 nt-0.05□□□□□ -2.42
VPS55P47111 YJL127W-AYJL127W-A 117 nt-0.05□□□□□ -2.42
VPS55P47111 RPL26AYLR344W 384 nt-0.05□□□□□ -2.42
VPS55P47111 BSC3YLR465C 309 nt-0.05□□□□□ -2.42
VPS55P47111 YMR075C-AYMR075C-A 366 nt-0.05□□□□□ -2.42
VPS55P47111 RCO1YMR075W 2055 nt-0.06□□□□□ -2.42
VPS55P47111 YLL032CYLL032C 2478 nt-0.06□□□□□ -2.42
VPS55P47111 YBR071WYBR071W 636 nt-0.06□□□□□ -2.42
VPS55P47111 YCL002CYCL002C 792 nt-0.06□□□□□ -2.42
VPS55P47111 ORC3YLL004W 1851 nt-0.06□□□□□ -2.42
VPS55P47111 TDA2YER071C 381 nt-0.07□□□□□ -2.42
VPS55P47111 TIM10YHR005C-A 282 nt-0.07□□□□□ -2.42
VPS55P47111 CDC33YOL139C 642 nt-0.07□□□□□ -2.42
VPS55P47111 YOR364WYOR364W 369 nt-0.07□□□□□ -2.42
VPS55P47111 NPC2YDL046W 522 nt-0.08□□□□□ -2.42
VPS55P47111 YER138W-AYER138W-A 105 nt-0.08□□□□□ -2.42
VPS55P47111 LOC1YFR001W 615 nt-0.08□□□□□ -2.42
VPS55P47111 MRPL31YKL138C 396 nt-0.08□□□□□ -2.42
VPS55P47111 MCM10YIL150C 1716 nt-0.09□□□□□ -2.42
VPS55P47111 YDR220CYDR220C 294 nt-0.09□□□□□ -2.42
VPS55P47111 HTB1YDR224C 396 nt-0.09□□□□□ -2.42
VPS55P47111 YFR012W-AYFR012W-A 87 nt-0.09□□□□□ -2.42
VPS55P47111 POL32YJR043C 1053 nt-0.09□□□□□ -2.42
VPS55P47111 YKL111CYKL111C 336 nt-0.09□□□□□ -2.42
VPS55P47111 IPI3YNL182C 1668 nt-0.09□□□□□ -2.42
VPS55P47111 RRI2YOL117W 1938 nt-0.09□□□□□ -2.42
VPS55P47111 PRP39YML046W 1890 nt-0.1□□□□□ -2.42
VPS55P47111 GPG1YGL121C 381 nt-0.1□□□□□ -2.43
VPS55P47111 COX3Q0275 810 nt-0.1□□□□□ -2.43
VPS55P47111 YLR232WYLR232W 348 nt-0.1□□□□□ -2.43
VPS55P47111 UTP8YGR128C 2142 nt-0.1□□□□□ -2.43
VPS55P47111 YER076W-AYER076W-A 348 nt-0.11□□□□□ -2.43
VPS55P47111 YMR013C-AYMR013C-A 150 nt-0.11□□□□□ -2.43
VPS55P47111 YMR141W-AYMR141W-A 225 nt-0.11□□□□□ -2.43
VPS55P47111 LEE1YPL054W 906 nt-0.11□□□□□ -2.43
VPS55P47111 YPL197CYPL197C 414 nt-0.11□□□□□ -2.43
VPS55P47111 YBR064WYBR064W 429 nt-0.11□□□□□ -2.43
VPS55P47111 MRPL50YNR022C 420 nt-0.12□□□□□ -2.43
VPS55P47111 CSM4YPL200W 471 nt-0.12□□□□□ -2.43
VPS55P47111 PRP42YDR235W 1635 nt-0.13□□□□□ -2.43
VPS55P47111 LIN1YHR156C 1023 nt-0.13□□□□□ -2.43
VPS55P47111 YJR079WYJR079W 330 nt-0.13□□□□□ -2.43
VPS55P47111 YLR146W-AYLR146W-A 189 nt-0.13□□□□□ -2.43
VPS55P47111 YLR198CYLR198C 360 nt-0.13□□□□□ -2.43
VPS55P47111 YBL008W-AYBL008W-A 240 nt-0.13□□□□□ -2.43
VPS55P47111 COG8YML071C 1824 nt-0.14□□□□□ -2.43
VPS55P47111 SSS1YDR086C 243 nt-0.14□□□□□ -2.43
VPS55P47111 YGR270C-AYGR270C-A 219 nt-0.14□□□□□ -2.43
VPS55P47111 TFB6YOR352W 1032 nt-0.14□□□□□ -2.43
VPS55P47111 SOV1YMR066W 2697 nt-0.14□□□□□ -2.43
VPS55P47111 RFX1YLR176C 2436 nt-0.15□□□□□ -2.43
VPS55P47111 RPL35AYDL191W 363 nt-0.15□□□□□ -2.43
VPS55P47111 YAR053WYAR053W 297 nt-0.15□□□□□ -2.43
VPS55P47111 YNL146C-AYNL146C-A 195 nt-0.15□□□□□ -2.43
VPS55P47111 IRC16YPR038W 360 nt-0.15□□□□□ -2.43
VPS55P47111 BI4Q0120 1917 nt-0.15□□□□□ -2.43
VPS55P47111 YDR371C-AYDR371C-A 105 nt-0.16□□□□□ -2.44
VPS55P47111 ULI1YFR026C 510 nt-0.16□□□□□ -2.44
VPS55P47111 YIR018C-AYIR018C-A 138 nt-0.16□□□□□ -2.44
VPS55P47111 YPL044CYPL044C 549 nt-0.16□□□□□ -2.44
VPS55P47111 INP2YMR163C 2118 nt-0.17□□□□□ -2.44
VPS55P47111 OST4YDL232W 111 nt-0.17□□□□□ -2.44
VPS55P47111 YER188C-AYER188C-A 300 nt-0.17□□□□□ -2.44
VPS55P47111 COY1YKL179C 2040 nt-0.17□□□□□ -2.44
VPS55P47111 YNL150WYNL150W 408 nt-0.17□□□□□ -2.44
VPS55P47111 RPB10YOR210W 213 nt-0.17□□□□□ -2.44
VPS55P47111 ZIP2YGL249W 2115 nt-0.18□□□□□ -2.44
VPS55P47111 YJL135WYJL135W 318 nt-0.18□□□□□ -2.44
VPS55P47111 CMC1YKL137W 336 nt-0.18□□□□□ -2.44
VPS55P47111 RPS27AYKL156W 249 nt-0.18□□□□□ -2.44
VPS55P47111 SDS22YKL193C 1017 nt-0.18□□□□□ -2.44
VPS55P47111 YNL050CYNL050C 813 nt-0.18□□□□□ -2.44
VPS55P47111 YOR345CYOR345C 351 nt-0.18□□□□□ -2.44
VPS55P47111 CUL3YGR003W 2235 nt-0.19□□□□□ -2.44
VPS55P47111 CWC23YGL128C 852 nt-0.19□□□□□ -2.44
VPS55P47111 RPS26AYGL189C 360 nt-0.19□□□□□ -2.44
VPS55P47111 CUP1-1YHR053C 186 nt-0.19□□□□□ -2.44
VPS55P47111 CUP1-2YHR055C 186 nt-0.19□□□□□ -2.44
VPS55P47111 YLR271WYLR271W 825 nt-0.19□□□□□ -2.44
VPS55P47111 SNU56YDR240C 1479 nt-0.2□□□□□ -2.44
VPS55P47111 YER135CYER135C 393 nt-0.2□□□□□ -2.44
VPS55P47111 YBL062WYBL062W 381 nt-0.2□□□□□ -2.44
VPS55P47111 YDL187CYDL187C 330 nt-0.21□□□□□ -2.44
VPS55P47111 YKL068W-AYKL068W-A 237 nt-0.21□□□□□ -2.44
VPS55P47111 YNL146WYNL146W 303 nt-0.21□□□□□ -2.44
VPS55P47111 OLI1Q0130 231 nt-0.22□□□□□ -2.44
VPS55P47111 PRP21YJL203W 843 nt-0.22□□□□□ -2.44
VPS55P47111 VAM3YOR106W 852 nt-0.22□□□□□ -2.44
VPS55P47111 YBR076C-AYBR076C-A 267 nt-0.22□□□□□ -2.44
VPS55P47111 YPR160W-AYPR160W-A 81 nt-0.22□□□□□ -2.44
VPS55P47111 YBR206WYBR206W 324 nt-0.22□□□□□ -2.44
VPS55P47111 YDR210WYDR210W 228 nt-0.23□□□□□ -2.45
VPS55P47111 YPR096CYPR096C 303 nt-0.23□□□□□ -2.45
VPS55P47111 TFB5YDR079C-A 219 nt-0.24□□□□□ -2.45
VPS55P47111 YDR269CYDR269C 324 nt-0.24□□□□□ -2.45
Retrieved 100 of 7,029 protein–RNA pairs in 27.3 ms