Protein–RNA interactions for Protein: P40959

MVP1, Sorting nexin MVP1, yeastyeast

Known RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MVP1P40959 RPO41YFL036W 4056 nt3.28□□□□□ -1.88
MVP1P40959 STE11YLR362W 2154 nt3.27□□□□□ -1.89
MVP1P40959 NOP14YDL148C 2433 nt3.27□□□□□ -1.89
MVP1P40959 YAL067W-AYAL067W-A 228 nt3.27□□□□□ -1.89
MVP1P40959 RPS28BYLR264W 204 nt3.27□□□□□ -1.89
MVP1P40959 HSH155YMR288W 2916 nt3.27□□□□□ -1.89
MVP1P40959 TTI1YKL033W 3117 nt3.27□□□□□ -1.89
MVP1P40959 MET6YER091C 2304 nt3.26□□□□□ -1.89
MVP1P40959 APL2YKL135C 2181 nt3.25□□□□□ -1.89
MVP1P40959 ENV11YGR071C 2583 nt3.25□□□□□ -1.89
MVP1P40959 YLL054CYLL054C 2532 nt3.25□□□□□ -1.89
MVP1P40959 IRC8YJL051W 2469 nt3.25□□□□□ -1.89
MVP1P40959 SKP2YNL311C 2292 nt3.25□□□□□ -1.89
MVP1P40959 YJL026C-AYJL026C-A 222 nt3.25□□□□□ -1.89
MVP1P40959 YAL042C-AYAL042C-A 378 nt3.25□□□□□ -1.89
MVP1P40959 MSB2YGR014W 3921 nt3.25□□□□□ -1.89
MVP1P40959 PHO91YNR013C 2685 nt3.24□□□□□ -1.89
MVP1P40959 SAP190YKR028W 3102 nt3.24□□□□□ -1.89
MVP1P40959 snR81snR81 201 nt3.23□□□□□ -1.89
MVP1P40959 YGL182CYGL182C 324 nt3.23□□□□□ -1.89
MVP1P40959 QCR9YGR183C 201 nt3.22□□□□□ -1.89
MVP1P40959 MMS1YPR164W 4224 nt3.22□□□□□ -1.89
MVP1P40959 YGR027W-BYGR027W-B 5268 nt3.21□□□□□ -1.89
MVP1P40959 YLR227W-BYLR227W-B 5268 nt3.21□□□□□ -1.89
MVP1P40959 YPR158C-DYPR158C-D 5268 nt3.21□□□□□ -1.89
MVP1P40959 RCO1YMR075W 2055 nt3.21□□□□□ -1.89
MVP1P40959 BUD4YJR092W 4344 nt3.21□□□□□ -1.9
MVP1P40959 YDR521WYDR521W 336 nt3.21□□□□□ -1.9
MVP1P40959 ESL1YIL151C 3357 nt3.21□□□□□ -1.9
MVP1P40959 YBT1YLL048C 4986 nt3.2□□□□□ -1.9
MVP1P40959 snR62snR62 100 nt3.2□□□□□ -1.9
MVP1P40959 YKR075W-AYKR075W-A 270 nt3.2□□□□□ -1.9
MVP1P40959 STE6YKL209C 3873 nt3.19□□□□□ -1.9
MVP1P40959 ALK1YGL021W 2283 nt3.19□□□□□ -1.9
MVP1P40959 SPO14YKR031C 5052 nt3.19□□□□□ -1.9
MVP1P40959 BUB1YGR188C 3066 nt3.19□□□□□ -1.9
MVP1P40959 INP51YIL002C 2841 nt3.19□□□□□ -1.9
MVP1P40959 APL1YJR005W 2103 nt3.18□□□□□ -1.9
MVP1P40959 SRB8YCR081W 4284 nt3.18□□□□□ -1.9
MVP1P40959 YNL018CYNL018C 1839 nt3.18□□□□□ -1.9
MVP1P40959 SSN2YDR443C 4263 nt3.17□□□□□ -1.9
MVP1P40959 SIN3YOL004W 4611 nt3.17□□□□□ -1.9
MVP1P40959 PNC1YGL037C 651 nt3.17□□□□□ -1.9
MVP1P40959 YHR131W-AYHR131W-A 246 nt3.17□□□□□ -1.9
MVP1P40959 MAK10YEL053C 2202 nt3.17□□□□□ -1.9
MVP1P40959 NFT1YKR103W 3657 nt3.17□□□□□ -1.9
MVP1P40959 SMC6YLR383W 3345 nt3.16□□□□□ -1.9
MVP1P40959 SEC63YOR254C 1992 nt3.16□□□□□ -1.9
MVP1P40959 CBF2YGR140W 2871 nt3.15□□□□□ -1.9
MVP1P40959 UTP8YGR128C 2142 nt3.15□□□□□ -1.91
MVP1P40959 NEW1YPL226W 3591 nt3.15□□□□□ -1.91
MVP1P40959 YOR296WYOR296W 3870 nt3.15□□□□□ -1.91
MVP1P40959 LHS1YKL073W 2646 nt3.14□□□□□ -1.91
MVP1P40959 YAL037C-AYAL037C-A 93 nt3.14□□□□□ -1.91
MVP1P40959 YLL020CYLL020C 306 nt3.14□□□□□ -1.91
MVP1P40959 ISW1YBR245C 3390 nt3.14□□□□□ -1.91
MVP1P40959 YOL019W-AYOL019W-A 153 nt3.13□□□□□ -1.91
MVP1P40959 MLH3YPL164C 2148 nt3.13□□□□□ -1.91
MVP1P40959 STB6YKL072W 2301 nt3.13□□□□□ -1.91
MVP1P40959 ESL2YKR096W 3588 nt3.12□□□□□ -1.91
MVP1P40959 tF(GAA)DtF(GAA)D 73 nt3.12□□□□□ -1.91
MVP1P40959 tF(GAA)NtF(GAA)N 73 nt3.12□□□□□ -1.91
MVP1P40959 YIL156W-BYIL156W-B 222 nt3.12□□□□□ -1.91
MVP1P40959 MLH1YMR167W 2310 nt3.11□□□□□ -1.91
MVP1P40959 POL3YDL102W 3294 nt3.11□□□□□ -1.91
MVP1P40959 snR39BsnR39B 96 nt3.1□□□□□ -1.91
MVP1P40959 YIL169CYIL169C 2988 nt3.1□□□□□ -1.91
MVP1P40959 YPP1YGR198W 2454 nt3.09□□□□□ -1.91
MVP1P40959 RIF1YBR275C 5751 nt3.09□□□□□ -1.91
MVP1P40959 MRD1YPR112C 2664 nt3.09□□□□□ -1.91
MVP1P40959 PKH2YOL100W 3246 nt3.09□□□□□ -1.92
MVP1P40959 DYN1YKR054C 12279 nt3.08□□□□□ -1.92
MVP1P40959 BUD2YKL092C 3315 nt3.07□□□□□ -1.92
MVP1P40959 FLO1YAR050W 4614 nt3.07□□□□□ -1.92
MVP1P40959 UBP15YMR304W 3693 nt3.07□□□□□ -1.92
MVP1P40959 tC(GCA)BtC(GCA)B 72 nt3.07□□□□□ -1.92
MVP1P40959 tC(GCA)GtC(GCA)G 72 nt3.07□□□□□ -1.92
MVP1P40959 tC(GCA)P1tC(GCA)P1 72 nt3.07□□□□□ -1.92
MVP1P40959 tC(GCA)P2tC(GCA)P2 72 nt3.07□□□□□ -1.92
MVP1P40959 YBL039C-AYBL039C-A 84 nt3.07□□□□□ -1.92
MVP1P40959 SNQ2YDR011W 4506 nt3.07□□□□□ -1.92
MVP1P40959 VPS8YAL002W 3825 nt3.07□□□□□ -1.92
MVP1P40959 UBP1YDL122W 2430 nt3.07□□□□□ -1.92
MVP1P40959 CAF120YNL278W 3183 nt3.06□□□□□ -1.92
MVP1P40959 HMI1YOL095C 2121 nt3.06□□□□□ -1.92
MVP1P40959 JSN1YJR091C 3276 nt3.05□□□□□ -1.92
MVP1P40959 AMS1YGL156W 3252 nt3.05□□□□□ -1.92
MVP1P40959 RGC1YPR115W 3252 nt3.05□□□□□ -1.92
MVP1P40959 YPL216WYPL216W 3309 nt3.04□□□□□ -1.92
MVP1P40959 RPL37BYDR500C 267 nt3.03□□□□□ -1.92
MVP1P40959 YHR086W-AYHR086W-A 162 nt3.03□□□□□ -1.92
MVP1P40959 RPA190YOR341W 4995 nt3.03□□□□□ -1.92
MVP1P40959 BFR2YDR299W 1605 nt3.03□□□□□ -1.92
MVP1P40959 YPL150WYPL150W 2706 nt3.03□□□□□ -1.92
MVP1P40959 MSH5YDL154W 2706 nt3.02□□□□□ -1.93
MVP1P40959 SCP160YJL080C 3669 nt3.02□□□□□ -1.93
MVP1P40959 ILS1YBL076C 3219 nt3.02□□□□□ -1.93
MVP1P40959 SAP1YER047C 2694 nt3.02□□□□□ -1.93
MVP1P40959 YGR109W-BYGR109W-B 4644 nt3.02□□□□□ -1.93
MVP1P40959 SAP185YJL098W 3177 nt3.01□□□□□ -1.93
Retrieved 100 of 7,029 protein–RNA pairs in 82.6 ms