Protein–RNA interactions for Protein: P34110

VPS35, Vacuolar protein sorting-associated protein 35, yeastyeast

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS35P34110 PUT3YKL015W 2940 nt2.67□□□□□ -1.98
VPS35P34110 YDR182W-AYDR182W-A 204 nt2.66□□□□□ -1.98
VPS35P34110 RPS17AYML024W 411 nt2.66□□□□□ -1.98
VPS35P34110 YMR242W-AYMR242W-A 90 nt2.66□□□□□ -1.98
VPS35P34110 HSH155YMR288W 2916 nt2.66□□□□□ -1.98
VPS35P34110 DCP2YNL118C 2913 nt2.66□□□□□ -1.98
VPS35P34110 ELG1YOR144C 2376 nt2.66□□□□□ -1.98
VPS35P34110 ZIP2YGL249W 2115 nt2.65□□□□□ -1.98
VPS35P34110 YJL120WYJL120W 324 nt2.65□□□□□ -1.99
VPS35P34110 KTI11YBL071W-A 249 nt2.65□□□□□ -1.99
VPS35P34110 YOR055WYOR055W 435 nt2.65□□□□□ -1.99
VPS35P34110 YBR174CYBR174C 315 nt2.65□□□□□ -1.99
VPS35P34110 SAS3YBL052C 2496 nt2.65□□□□□ -1.99
VPS35P34110 ARP8YOR141C 2646 nt2.64□□□□□ -1.99
VPS35P34110 EDS1YBR033W 2760 nt2.64□□□□□ -1.99
VPS35P34110 NAM7YMR080C 2916 nt2.64□□□□□ -1.99
VPS35P34110 SDH6YDR379C-A 240 nt2.64□□□□□ -1.99
VPS35P34110 RPS25BYLR333C 327 nt2.64□□□□□ -1.99
VPS35P34110 YOR108C-AYOR108C-A 210 nt2.64□□□□□ -1.99
VPS35P34110 ACM1YPL267W 630 nt2.64□□□□□ -1.99
VPS35P34110 ENV11YGR071C 2583 nt2.64□□□□□ -1.99
VPS35P34110 ATG11YPR049C 3537 nt2.64□□□□□ -1.99
VPS35P34110 GIP3YPL137C 3831 nt2.64□□□□□ -1.99
VPS35P34110 TRA1YHR099W 11235 nt2.64□□□□□ -1.99
VPS35P34110 RAV1YJR033C 4074 nt2.63□□□□□ -1.99
VPS35P34110 KRE33YNL132W 3171 nt2.63□□□□□ -1.99
VPS35P34110 TRL1YJL087C 2484 nt2.63□□□□□ -1.99
VPS35P34110 CAT2YML042W 2013 nt2.63□□□□□ -1.99
VPS35P34110 ATP7YKL016C 525 nt2.63□□□□□ -1.99
VPS35P34110 RAD34YDR314C 2079 nt2.63□□□□□ -1.99
VPS35P34110 LRE1YCL051W 1752 nt2.63□□□□□ -1.99
VPS35P34110 SGM1YJR134C 2124 nt2.63□□□□□ -1.99
VPS35P34110 PHO91YNR013C 2685 nt2.62□□□□□ -1.99
VPS35P34110 YOR072W-BYOR072W-B 162 nt2.62□□□□□ -1.99
VPS35P34110 YDR341CYDR341C 1824 nt2.61□□□□□ -1.99
VPS35P34110 SCP160YJL080C 3669 nt2.61□□□□□ -1.99
VPS35P34110 BRP1YGL007W 378 nt2.61□□□□□ -1.99
VPS35P34110 PSD2YGR170W 3417 nt2.61□□□□□ -1.99
VPS35P34110 SCD5YOR329C 2619 nt2.61□□□□□ -1.99
VPS35P34110 MAK10YEL053C 2202 nt2.61□□□□□ -1.99
VPS35P34110 MLH1YMR167W 2310 nt2.6□□□□□ -1.99
VPS35P34110 YIL156W-BYIL156W-B 222 nt2.6□□□□□ -1.99
VPS35P34110 COF1YLL050C 432 nt2.6□□□□□ -1.99
VPS35P34110 YEF3YLR249W 3135 nt2.6□□□□□ -1.99
VPS35P34110 ORC2YBR060C 1863 nt2.6□□□□□ -1.99
VPS35P34110 NOC3YLR002C 1992 nt2.6□□□□□ -1.99
VPS35P34110 MAD1YGL086W 2250 nt2.59□□□□□ -1.99
VPS35P34110 IRA2YOL081W 9240 nt2.59□□□□□ -1.99
VPS35P34110 APL2YKL135C 2181 nt2.59□□□□□ -1.99
VPS35P34110 YOR381W-AYOR381W-A 168 nt2.59□□□□□ -1.99
VPS35P34110 CHC1YGL206C 4962 nt2.59□□□□□ -2
VPS35P34110 SEC16YPL085W 6588 nt2.58□□□□□ -2
VPS35P34110 CDC60YPL160W 3273 nt2.58□□□□□ -2
VPS35P34110 Q0143Q0143 153 nt2.58□□□□□ -2
VPS35P34110 STE11YLR362W 2154 nt2.58□□□□□ -2
VPS35P34110 MSH5YDL154W 2706 nt2.57□□□□□ -2
VPS35P34110 YOR345CYOR345C 351 nt2.57□□□□□ -2
VPS35P34110 SYH1YPL105C 2550 nt2.57□□□□□ -2
VPS35P34110 APL5YPL195W 2799 nt2.57□□□□□ -2
VPS35P34110 MSB1YOR188W 3414 nt2.56□□□□□ -2
VPS35P34110 YFR016CYFR016C 3702 nt2.56□□□□□ -2
VPS35P34110 RPL31AYDL075W 342 nt2.56□□□□□ -2
VPS35P34110 YGR164WYGR164W 336 nt2.56□□□□□ -2
VPS35P34110 YKR075W-AYKR075W-A 270 nt2.56□□□□□ -2
VPS35P34110 RTT107YHR154W 3213 nt2.56□□□□□ -2
VPS35P34110 YOR343W-BYOR343W-B 5313 nt2.55□□□□□ -2
VPS35P34110 MLH3YPL164C 2148 nt2.55□□□□□ -2
VPS35P34110 PAU3YCR104W 375 nt2.54□□□□□ -2
VPS35P34110 RPL37BYDR500C 267 nt2.54□□□□□ -2
VPS35P34110 TIM9YEL020W-A 264 nt2.54□□□□□ -2
VPS35P34110 YIR044CYIR044C 186 nt2.54□□□□□ -2
VPS35P34110 SVL3YPL032C 2478 nt2.54□□□□□ -2
VPS35P34110 VPS13YLL040C 9435 nt2.54□□□□□ -2
VPS35P34110 VTC1YER072W 390 nt2.53□□□□□ -2
VPS35P34110 RPL33BYOR234C 324 nt2.53□□□□□ -2
VPS35P34110 UBP1YDL122W 2430 nt2.53□□□□□ -2
VPS35P34110 PET309YLR067C 2898 nt2.52□□□□□ -2.01
VPS35P34110 YPR097WYPR097W 3222 nt2.52□□□□□ -2.01
VPS35P34110 YLL019W-AYLL019W-A 93 nt2.52□□□□□ -2.01
VPS35P34110 YOR161W-BYOR161W-B 261 nt2.52□□□□□ -2.01
VPS35P34110 YLL007CYLL007C 1998 nt2.52□□□□□ -2.01
VPS35P34110 DGR2YKL121W 2559 nt2.52□□□□□ -2.01
VPS35P34110 SIR3YLR442C 2937 nt2.52□□□□□ -2.01
VPS35P34110 STH1YIL126W 4080 nt2.51□□□□□ -2.01
VPS35P34110 PIG1YLR273C 1947 nt2.51□□□□□ -2.01
VPS35P34110 YDL196WYDL196W 330 nt2.51□□□□□ -2.01
VPS35P34110 YEL073CYEL073C 324 nt2.51□□□□□ -2.01
VPS35P34110 BNI1YNL271C 5862 nt2.51□□□□□ -2.01
VPS35P34110 CTR9YOL145C 3234 nt2.5□□□□□ -2.01
VPS35P34110 PMP1YCR024C-A 123 nt2.5□□□□□ -2.01
VPS35P34110 AGC1YPR021C 2709 nt2.5□□□□□ -2.01
VPS35P34110 CUL3YGR003W 2235 nt2.5□□□□□ -2.01
VPS35P34110 NCA2YPR155C 1851 nt2.5□□□□□ -2.01
VPS35P34110 SIR4YDR227W 4077 nt2.49□□□□□ -2.01
VPS35P34110 SAP190YKR028W 3102 nt2.49□□□□□ -2.01
VPS35P34110 YCR087C-AYCR087C-A 462 nt2.49□□□□□ -2.01
VPS35P34110 HMI1YOL095C 2121 nt2.49□□□□□ -2.01
VPS35P34110 RTT101YJL047C 2529 nt2.49□□□□□ -2.01
VPS35P34110 PTP2YOR208W 2253 nt2.49□□□□□ -2.01
VPS35P34110 SPF1YEL031W 3648 nt2.48□□□□□ -2.01
Retrieved 100 of 7,029 protein–RNA pairs in 13.3 ms