Protein–RNA interactions for Protein: P33400

RIM101, pH-response transcription factor pacC/RIM101, yeastyeast

Predictions only

Length 625 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RIM101P33400 PAU11YGL261C 363 nt4□□□□□ -1.77
RIM101P33400 BUD4YJR092W 4344 nt3.99□□□□□ -1.77
RIM101P33400 ARO80YDR421W 2853 nt3.99□□□□□ -1.77
RIM101P33400 YGR109W-BYGR109W-B 4644 nt3.98□□□□□ -1.77
RIM101P33400 ECM21YBL101C 3354 nt3.97□□□□□ -1.77
RIM101P33400 MLH3YPL164C 2148 nt3.97□□□□□ -1.77
RIM101P33400 RPS26AYGL189C 360 nt3.97□□□□□ -1.77
RIM101P33400 TFC4YGR047C 3078 nt3.96□□□□□ -1.77
RIM101P33400 FLO9YAL063C 3969 nt3.96□□□□□ -1.78
RIM101P33400 COP1YDL145C 3606 nt3.96□□□□□ -1.78
RIM101P33400 YDR210WYDR210W 228 nt3.96□□□□□ -1.78
RIM101P33400 RAD26YJR035W 3258 nt3.96□□□□□ -1.78
RIM101P33400 YPR108W-AYPR108W-A 213 nt3.95□□□□□ -1.78
RIM101P33400 RTT107YHR154W 3213 nt3.95□□□□□ -1.78
RIM101P33400 SGM1YJR134C 2124 nt3.95□□□□□ -1.78
RIM101P33400 GLG1YKR058W 1851 nt3.94□□□□□ -1.78
RIM101P33400 BUB1YGR188C 3066 nt3.94□□□□□ -1.78
RIM101P33400 SUP56tL(CAA)A 82 nt3.94□□□□□ -1.78
RIM101P33400 SUP53tL(CAA)C 82 nt3.94□□□□□ -1.78
RIM101P33400 tL(CAA)DtL(CAA)D 82 nt3.94□□□□□ -1.78
RIM101P33400 tL(CAA)G1tL(CAA)G1 82 nt3.94□□□□□ -1.78
RIM101P33400 SUP54tL(CAA)G2 82 nt3.94□□□□□ -1.78
RIM101P33400 tL(CAA)G3tL(CAA)G3 82 nt3.94□□□□□ -1.78
RIM101P33400 tL(CAA)KtL(CAA)K 82 nt3.94□□□□□ -1.78
RIM101P33400 tL(CAA)LtL(CAA)L 82 nt3.94□□□□□ -1.78
RIM101P33400 tL(CAA)MtL(CAA)M 82 nt3.94□□□□□ -1.78
RIM101P33400 tL(CAA)NtL(CAA)N 82 nt3.94□□□□□ -1.78
RIM101P33400 COX19YLL018C-A 297 nt3.94□□□□□ -1.78
RIM101P33400 SMC6YLR383W 3345 nt3.94□□□□□ -1.78
RIM101P33400 HEF3YNL014W 3135 nt3.93□□□□□ -1.78
RIM101P33400 IST2YBR086C 2841 nt3.93□□□□□ -1.78
RIM101P33400 FIR1YER032W 2631 nt3.93□□□□□ -1.78
RIM101P33400 YDL206WYDL206W 2289 nt3.93□□□□□ -1.78
RIM101P33400 UFD2YDL190C 2886 nt3.92□□□□□ -1.78
RIM101P33400 SMC3YJL074C 3693 nt3.92□□□□□ -1.78
RIM101P33400 TAF1YGR274C 3201 nt3.92□□□□□ -1.78
RIM101P33400 EAF1YDR359C 2949 nt3.91□□□□□ -1.78
RIM101P33400 SPC105YGL093W 2754 nt3.9□□□□□ -1.78
RIM101P33400 YAL042C-AYAL042C-A 378 nt3.9□□□□□ -1.79
RIM101P33400 BUD2YKL092C 3315 nt3.9□□□□□ -1.79
RIM101P33400 ATG26YLR189C 3597 nt3.89□□□□□ -1.79
RIM101P33400 TBS1YBR150C 3285 nt3.89□□□□□ -1.79
RIM101P33400 VAS1YGR094W 3315 nt3.88□□□□□ -1.79
RIM101P33400 snR75snR75 89 nt3.88□□□□□ -1.79
RIM101P33400 YGR146C-AYGR146C-A 162 nt3.88□□□□□ -1.79
RIM101P33400 snR47snR47 99 nt3.88□□□□□ -1.79
RIM101P33400 STU1YBL034C 4542 nt3.88□□□□□ -1.79
RIM101P33400 STU2YLR045C 2667 nt3.88□□□□□ -1.79
RIM101P33400 ARO1YDR127W 4767 nt3.87□□□□□ -1.79
RIM101P33400 BMS1YPL217C 3552 nt3.87□□□□□ -1.79
RIM101P33400 PKH1YDR490C 2301 nt3.87□□□□□ -1.79
RIM101P33400 YBR196C-AYBR196C-A 150 nt3.87□□□□□ -1.79
RIM101P33400 PDR12YPL058C 4536 nt3.86□□□□□ -1.79
RIM101P33400 JSN1YJR091C 3276 nt3.85□□□□□ -1.79
RIM101P33400 SLI15YBR156C 2097 nt3.85□□□□□ -1.79
RIM101P33400 SCP160YJL080C 3669 nt3.85□□□□□ -1.79
RIM101P33400 SAP185YJL098W 3177 nt3.85□□□□□ -1.79
RIM101P33400 DBP10YDL031W 2988 nt3.84□□□□□ -1.79
RIM101P33400 MYO3YKL129C 3819 nt3.84□□□□□ -1.79
RIM101P33400 tV(CAC)DtV(CAC)D 73 nt3.84□□□□□ -1.79
RIM101P33400 tV(CAC)HtV(CAC)H 73 nt3.84□□□□□ -1.79
RIM101P33400 YOR161W-AYOR161W-A 81 nt3.84□□□□□ -1.79
RIM101P33400 FRK1YPL141C 2598 nt3.84□□□□□ -1.8
RIM101P33400 POL3YDL102W 3294 nt3.83□□□□□ -1.8
RIM101P33400 YLR232WYLR232W 348 nt3.83□□□□□ -1.8
RIM101P33400 RSM22YKL155C 1887 nt3.83□□□□□ -1.8
RIM101P33400 INP51YIL002C 2841 nt3.82□□□□□ -1.8
RIM101P33400 YKL096C-BYKL096C-B 150 nt3.82□□□□□ -1.8
RIM101P33400 CBF2YGR140W 2871 nt3.81□□□□□ -1.8
RIM101P33400 SSM4YIL030C 3960 nt3.81□□□□□ -1.8
RIM101P33400 YJR039WYJR039W 3366 nt3.81□□□□□ -1.8
RIM101P33400 ADR1YDR216W 3972 nt3.81□□□□□ -1.8
RIM101P33400 MSH5YDL154W 2706 nt3.79□□□□□ -1.8
RIM101P33400 SEC26YDR238C 2922 nt3.79□□□□□ -1.8
RIM101P33400 ASE1YOR058C 2658 nt3.79□□□□□ -1.8
RIM101P33400 MRD1YPR112C 2664 nt3.79□□□□□ -1.8
RIM101P33400 RTP1YMR185W 2946 nt3.78□□□□□ -1.8
RIM101P33400 FLO5YHR211W 3228 nt3.78□□□□□ -1.81
RIM101P33400 RDS1YCR106W 2499 nt3.77□□□□□ -1.81
RIM101P33400 SIN3YOL004W 4611 nt3.77□□□□□ -1.81
RIM101P33400 YML002WYML002W 2214 nt3.76□□□□□ -1.81
RIM101P33400 ORC3YLL004W 1851 nt3.76□□□□□ -1.81
RIM101P33400 SSN2YDR443C 4263 nt3.76□□□□□ -1.81
RIM101P33400 TRS120YDR407C 3870 nt3.76□□□□□ -1.81
RIM101P33400 SVL3YPL032C 2478 nt3.76□□□□□ -1.81
RIM101P33400 YHR032C-AYHR032C-A 120 nt3.75□□□□□ -1.81
RIM101P33400 YOL019W-AYOL019W-A 153 nt3.75□□□□□ -1.81
RIM101P33400 CDC60YPL160W 3273 nt3.75□□□□□ -1.81
RIM101P33400 YEL025CYEL025C 3567 nt3.75□□□□□ -1.81
RIM101P33400 VPS8YAL002W 3825 nt3.74□□□□□ -1.81
RIM101P33400 SQS1YNL224C 2304 nt3.74□□□□□ -1.81
RIM101P33400 LOS1YKL205W 3303 nt3.74□□□□□ -1.81
RIM101P33400 AGC1YPR021C 2709 nt3.74□□□□□ -1.81
RIM101P33400 LRG1YDL240W 3054 nt3.74□□□□□ -1.81
RIM101P33400 MDS3YGL197W 4464 nt3.73□□□□□ -1.81
RIM101P33400 PNC1YGL037C 651 nt3.73□□□□□ -1.81
RIM101P33400 IES6YEL044W 501 nt3.72□□□□□ -1.81
RIM101P33400 YKL162C-AYKL162C-A 153 nt3.72□□□□□ -1.81
RIM101P33400 YLR286W-AYLR286W-A 135 nt3.72□□□□□ -1.81
RIM101P33400 AUS1YOR011W 4185 nt3.72□□□□□ -1.81
Retrieved 100 of 7,029 protein–RNA pairs in 14.4 ms