Protein–RNA interactions for Protein: P33202

UFD4, Ubiquitin fusion degradation protein 4, yeastyeast

Predictions only

Length 1,483 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD4P33202 ATP15YPL271W 189 nt-0.95□□□□□ -2.56
UFD4P33202 ECM9YKR004C 1134 nt-0.96□□□□□ -2.56
UFD4P33202 CDC33YOL139C 642 nt-0.96□□□□□ -2.56
UFD4P33202 OLI1Q0130 231 nt-0.97□□□□□ -2.56
UFD4P33202 GOS1YHL031C 672 nt-0.97□□□□□ -2.56
UFD4P33202 YKU70YMR284W 1809 nt-0.97□□□□□ -2.57
UFD4P33202 OST4YDL232W 111 nt-0.99□□□□□ -2.57
UFD4P33202 YPL044CYPL044C 549 nt-0.99□□□□□ -2.57
UFD4P33202 YDR182W-AYDR182W-A 204 nt-0.99□□□□□ -2.57
UFD4P33202 MAM33YIL070C 801 nt-0.99□□□□□ -2.57
UFD4P33202 RPS7BYNL096C 573 nt-0.99□□□□□ -2.57
UFD4P33202 CSM4YPL200W 471 nt-0.99□□□□□ -2.57
UFD4P33202 LSO2YGR169C-A 279 nt-1□□□□□ -2.57
UFD4P33202 AFB1YLR040C 675 nt-1□□□□□ -2.57
UFD4P33202 YNL146WYNL146W 303 nt-1.01□□□□□ -2.57
UFD4P33202 VPS28YPL065W 729 nt-1.01□□□□□ -2.57
UFD4P33202 GPG1YGL121C 381 nt-1.02□□□□□ -2.57
UFD4P33202 NFU1YKL040C 771 nt-1.02□□□□□ -2.57
UFD4P33202 YFR057WYFR057W 456 nt-1.03□□□□□ -2.57
UFD4P33202 HTB2YBL002W 396 nt-1.03□□□□□ -2.57
UFD4P33202 YBR223W-AYBR223W-A 120 nt-1.03□□□□□ -2.57
UFD4P33202 YHL048C-AYHL048C-A 135 nt-1.04□□□□□ -2.58
UFD4P33202 ARV1YLR242C 966 nt-1.05□□□□□ -2.58
UFD4P33202 ASE1YOR058C 2658 nt-1.05□□□□□ -2.58
UFD4P33202 GIM5YML094W 492 nt-1.05□□□□□ -2.58
UFD4P33202 snR161snR161 161 nt-1.05□□□□□ -2.58
UFD4P33202 COY1YKL179C 2040 nt-1.06□□□□□ -2.58
UFD4P33202 YER038W-AYER038W-A 381 nt-1.06□□□□□ -2.58
UFD4P33202 PRP21YJL203W 843 nt-1.06□□□□□ -2.58
UFD4P33202 snR36snR36 182 nt-1.06□□□□□ -2.58
UFD4P33202 YBR051WYBR051W 351 nt-1.07□□□□□ -2.58
UFD4P33202 snR33snR33 183 nt-1.07□□□□□ -2.58
UFD4P33202 NIP1YMR309C 2439 nt-1.07□□□□□ -2.58
UFD4P33202 COG6YNL041C 2520 nt-1.07□□□□□ -2.58
UFD4P33202 HTB1YDR224C 396 nt-1.08□□□□□ -2.58
UFD4P33202 YGR204C-AYGR204C-A 114 nt-1.08□□□□□ -2.58
UFD4P33202 YAL067W-AYAL067W-A 228 nt-1.08□□□□□ -2.58
UFD4P33202 SMD2YLR275W 333 nt-1.09□□□□□ -2.58
UFD4P33202 YKL115CYKL115C 393 nt-1.1□□□□□ -2.59
UFD4P33202 NUP82YJL061W 2142 nt-1.1□□□□□ -2.59
UFD4P33202 YJR141WYJR141W 1044 nt-1.11□□□□□ -2.59
UFD4P33202 YPL205CYPL205C 345 nt-1.11□□□□□ -2.59
UFD4P33202 YPR160W-AYPR160W-A 81 nt-1.11□□□□□ -2.59
UFD4P33202 YDL068WYDL068W 330 nt-1.12□□□□□ -2.59
UFD4P33202 YPL185WYPL185W 396 nt-1.13□□□□□ -2.59
UFD4P33202 BI3Q0115 1554 nt-1.14□□□□□ -2.59
UFD4P33202 YDL152WYDL152W 366 nt-1.14□□□□□ -2.59
UFD4P33202 DIE2YGR227W 1578 nt-1.15□□□□□ -2.59
UFD4P33202 YNL162W-AYNL162W-A 219 nt-1.16□□□□□ -2.59
UFD4P33202 YKL023C-AYKL023C-A 228 nt-1.17□□□□□ -2.6
UFD4P33202 RPL29YFR032C-A 180 nt-1.18□□□□□ -2.6
UFD4P33202 RMD6YEL072W 696 nt-1.18□□□□□ -2.6
UFD4P33202 TDA2YER071C 381 nt-1.18□□□□□ -2.6
UFD4P33202 YGL204CYGL204C 306 nt-1.18□□□□□ -2.6
UFD4P33202 YMR141W-AYMR141W-A 225 nt-1.18□□□□□ -2.6
UFD4P33202 YLR399W-AYLR399W-A 105 nt-1.19□□□□□ -2.6
UFD4P33202 snR44snR44 211 nt-1.19□□□□□ -2.6
UFD4P33202 YLL032CYLL032C 2478 nt-1.19□□□□□ -2.6
UFD4P33202 MMS21YEL019C 804 nt-1.2□□□□□ -2.6
UFD4P33202 GSP1YLR293C 660 nt-1.21□□□□□ -2.6
UFD4P33202 YMR158C-AYMR158C-A 138 nt-1.21□□□□□ -2.6
UFD4P33202 TFB6YOR352W 1032 nt-1.21□□□□□ -2.6
UFD4P33202 YBR121C-AYBR121C-A 159 nt-1.22□□□□□ -2.6
UFD4P33202 YPR096CYPR096C 303 nt-1.23□□□□□ -2.61
UFD4P33202 YOR020W-AYOR020W-A 273 nt-1.25□□□□□ -2.61
UFD4P33202 YOR345CYOR345C 351 nt-1.25□□□□□ -2.61
UFD4P33202 YDR008CYDR008C 351 nt-1.26□□□□□ -2.61
UFD4P33202 MRPL31YKL138C 396 nt-1.26□□□□□ -2.61
UFD4P33202 MFA2YNL145W 117 nt-1.26□□□□□ -2.61
UFD4P33202 YJR079WYJR079W 330 nt-1.27□□□□□ -2.61
UFD4P33202 YMR153C-AYMR153C-A 336 nt-1.27□□□□□ -2.61
UFD4P33202 BI4Q0120 1917 nt-1.29□□□□□ -2.62
UFD4P33202 YBR064WYBR064W 429 nt-1.3□□□□□ -2.62
UFD4P33202 PAA1YDR071C 576 nt-1.31□□□□□ -2.62
UFD4P33202 YJL120WYJL120W 324 nt-1.31□□□□□ -2.62
UFD4P33202 YPL119C-AYPL119C-A 264 nt-1.31□□□□□ -2.62
UFD4P33202 YOR248WYOR248W 303 nt-1.31□□□□□ -2.62
UFD4P33202 RSM18YER050C 417 nt-1.32□□□□□ -2.62
UFD4P33202 YGR115CYGR115C 780 nt-1.33□□□□□ -2.62
UFD4P33202 MRPS8YMR158W 468 nt-1.33□□□□□ -2.62
UFD4P33202 YPR142CYPR142C 564 nt-1.33□□□□□ -2.62
UFD4P33202 ATC1YDR184C 885 nt-1.34□□□□□ -2.62
UFD4P33202 YFR012W-AYFR012W-A 87 nt-1.34□□□□□ -2.62
UFD4P33202 ATP20YPR020W 348 nt-1.34□□□□□ -2.62
UFD4P33202 PAN3YKL025C 2040 nt-1.34□□□□□ -2.62
UFD4P33202 ZIP2YGL249W 2115 nt-1.35□□□□□ -2.63
UFD4P33202 SNU56YDR240C 1479 nt-1.35□□□□□ -2.63
UFD4P33202 YER076W-AYER076W-A 348 nt-1.36□□□□□ -2.63
UFD4P33202 YGL042CYGL042C 306 nt-1.36□□□□□ -2.63
UFD4P33202 YHR131W-AYHR131W-A 246 nt-1.36□□□□□ -2.63
UFD4P33202 YLR146W-AYLR146W-A 189 nt-1.36□□□□□ -2.63
UFD4P33202 YMR290W-AYMR290W-A 348 nt-1.36□□□□□ -2.63
UFD4P33202 YPR099CYPR099C 357 nt-1.36□□□□□ -2.63
UFD4P33202 YLR198CYLR198C 360 nt-1.37□□□□□ -2.63
UFD4P33202 RUB1YDR139C 234 nt-1.37□□□□□ -2.63
UFD4P33202 BLS1YLR408C 369 nt-1.37□□□□□ -2.63
UFD4P33202 YDR290WYDR290W 330 nt-1.38□□□□□ -2.63
UFD4P33202 PFS1YHR185C 714 nt-1.38□□□□□ -2.63
UFD4P33202 CMS1YLR003C 876 nt-1.38□□□□□ -2.63
UFD4P33202 YLR271WYLR271W 825 nt-1.38□□□□□ -2.63
Retrieved 100 of 7,029 protein–RNA pairs in 25.9 ms