Protein–RNA interactions for Protein: P25655

CDC39, General negative regulator of transcription subunit 1, yeastyeast

Known RBP Predictions only

Length 2,108 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC39P25655 BUD26YDR241W 288 nt0.28□□□□□ -2.37
CDC39P25655 GPG1YGL121C 381 nt0.28□□□□□ -2.37
CDC39P25655 BIG1YHR101C 1008 nt0.28□□□□□ -2.37
CDC39P25655 ECM9YKR004C 1134 nt0.28□□□□□ -2.37
CDC39P25655 YOP1YPR028W 543 nt0.28□□□□□ -2.37
CDC39P25655 AFB1YLR040C 675 nt0.27□□□□□ -2.37
CDC39P25655 YNL054W-BYNL054W-B 5250 nt0.27□□□□□ -2.37
CDC39P25655 YHR028W-AYHR028W-A 321 nt0.26□□□□□ -2.37
CDC39P25655 RPS24BYIL069C 408 nt0.26□□□□□ -2.37
CDC39P25655 YJR140W-AYJR140W-A 150 nt0.26□□□□□ -2.37
CDC39P25655 YBR221W-AYBR221W-A 105 nt0.26□□□□□ -2.37
CDC39P25655 YGR042WYGR042W 816 nt0.26□□□□□ -2.37
CDC39P25655 YJR079WYJR079W 330 nt0.25□□□□□ -2.37
CDC39P25655 YOR053WYOR053W 342 nt0.25□□□□□ -2.37
CDC39P25655 YPL044CYPL044C 549 nt0.25□□□□□ -2.37
CDC39P25655 EFR3YMR212C 2349 nt0.25□□□□□ -2.37
CDC39P25655 CYC7YEL039C 342 nt0.25□□□□□ -2.37
CDC39P25655 TIM8YJR135W-A 264 nt0.25□□□□□ -2.37
CDC39P25655 CMC1YKL137W 336 nt0.25□□□□□ -2.37
CDC39P25655 YLR146W-AYLR146W-A 189 nt0.25□□□□□ -2.37
CDC39P25655 YMR254CYMR254C 309 nt0.25□□□□□ -2.37
CDC39P25655 RPS7BYNL096C 573 nt0.25□□□□□ -2.37
CDC39P25655 YNL150WYNL150W 408 nt0.25□□□□□ -2.37
CDC39P25655 IRC16YPR038W 360 nt0.25□□□□□ -2.37
CDC39P25655 VIK1YPL253C 1944 nt0.24□□□□□ -2.37
CDC39P25655 YOR199WYOR199W 330 nt0.24□□□□□ -2.37
CDC39P25655 ZIP2YGL249W 2115 nt0.24□□□□□ -2.37
CDC39P25655 CWC23YGL128C 852 nt0.23□□□□□ -2.37
CDC39P25655 YOL013W-AYOL013W-A 192 nt0.23□□□□□ -2.37
CDC39P25655 LOA1YPR139C 903 nt0.23□□□□□ -2.37
CDC39P25655 SNU56YDR240C 1479 nt0.23□□□□□ -2.37
CDC39P25655 YER175W-AYER175W-A 165 nt0.23□□□□□ -2.37
CDC39P25655 YBR063CYBR063C 1215 nt0.23□□□□□ -2.37
CDC39P25655 YDL187CYDL187C 330 nt0.22□□□□□ -2.37
CDC39P25655 RPL26BYGR034W 384 nt0.22□□□□□ -2.37
CDC39P25655 STE5YDR103W 2754 nt0.22□□□□□ -2.37
CDC39P25655 THO2YNL139C 4794 nt0.22□□□□□ -2.37
CDC39P25655 RCN2YOR220W 798 nt0.22□□□□□ -2.37
CDC39P25655 AFR1YDR085C 1863 nt0.21□□□□□ -2.38
CDC39P25655 OLI1Q0130 231 nt0.21□□□□□ -2.38
CDC39P25655 YIL134C-AYIL134C-A 204 nt0.21□□□□□ -2.38
CDC39P25655 RPS27AYKL156W 249 nt0.21□□□□□ -2.38
CDC39P25655 snR84snR84 550 nt0.2□□□□□ -2.38
CDC39P25655 CUL3YGR003W 2235 nt0.2□□□□□ -2.38
CDC39P25655 APQ13YJL075C 417 nt0.2□□□□□ -2.38
CDC39P25655 YBR064WYBR064W 429 nt0.19□□□□□ -2.38
CDC39P25655 YLL032CYLL032C 2478 nt0.19□□□□□ -2.38
CDC39P25655 CHS6YJL099W 2241 nt0.19□□□□□ -2.38
CDC39P25655 NUT1YGL151W 3399 nt0.19□□□□□ -2.38
CDC39P25655 YPT6YLR262C 648 nt0.19□□□□□ -2.38
CDC39P25655 POP7YBR167C 423 nt0.19□□□□□ -2.38
CDC39P25655 YAR053WYAR053W 297 nt0.18□□□□□ -2.38
CDC39P25655 RPL32YBL092W 393 nt0.18□□□□□ -2.38
CDC39P25655 PRP39YML046W 1890 nt0.18□□□□□ -2.38
CDC39P25655 snR13snR13 124 nt0.17□□□□□ -2.38
CDC39P25655 GMC2YLR445W 567 nt0.17□□□□□ -2.38
CDC39P25655 LEE1YPL054W 906 nt0.17□□□□□ -2.38
CDC39P25655 YGR228WYGR228W 345 nt0.16□□□□□ -2.38
CDC39P25655 YHL042WYHL042W 453 nt0.16□□□□□ -2.38
CDC39P25655 YBL008W-AYBL008W-A 240 nt0.16□□□□□ -2.38
CDC39P25655 YOL029CYOL029C 606 nt0.16□□□□□ -2.38
CDC39P25655 DCP1YOL149W 696 nt0.16□□□□□ -2.38
CDC39P25655 YDR269CYDR269C 324 nt0.16□□□□□ -2.38
CDC39P25655 SBH1YER087C-B 249 nt0.16□□□□□ -2.38
CDC39P25655 SLD3YGL113W 2007 nt0.15□□□□□ -2.38
CDC39P25655 YSP1YHR155W 3687 nt0.15□□□□□ -2.38
CDC39P25655 CDC33YOL139C 642 nt0.15□□□□□ -2.39
CDC39P25655 RFX1YLR176C 2436 nt0.15□□□□□ -2.39
CDC39P25655 QCR7YDR529C 384 nt0.14□□□□□ -2.39
CDC39P25655 YJL020W-AYJL020W-A 258 nt0.14□□□□□ -2.39
CDC39P25655 YJR141WYJR141W 1044 nt0.14□□□□□ -2.39
CDC39P25655 NFU1YKL040C 771 nt0.14□□□□□ -2.39
CDC39P25655 VMA21YGR105W 234 nt0.13□□□□□ -2.39
CDC39P25655 MAM33YIL070C 801 nt0.13□□□□□ -2.39
CDC39P25655 RPL26AYLR344W 384 nt0.13□□□□□ -2.39
CDC39P25655 YKL044WYKL044W 321 nt0.13□□□□□ -2.39
CDC39P25655 YLR252WYLR252W 306 nt0.13□□□□□ -2.39
CDC39P25655 COG8YML071C 1824 nt0.13□□□□□ -2.39
CDC39P25655 YGL239CYGL239C 315 nt0.12□□□□□ -2.39
CDC39P25655 MRPL32YCR003W 552 nt0.11□□□□□ -2.39
CDC39P25655 ALG13YGL047W 609 nt0.11□□□□□ -2.39
CDC39P25655 NPC2YDL046W 522 nt0.11□□□□□ -2.39
CDC39P25655 YJL026C-AYJL026C-A 222 nt0.11□□□□□ -2.39
CDC39P25655 YKL023C-AYKL023C-A 228 nt0.11□□□□□ -2.39
CDC39P25655 YKL202WYKL202W 582 nt0.11□□□□□ -2.39
CDC39P25655 YMR290W-AYMR290W-A 348 nt0.11□□□□□ -2.39
CDC39P25655 YEL030C-AYEL030C-A 315 nt0.1□□□□□ -2.39
CDC39P25655 ABF2YMR072W 552 nt0.1□□□□□ -2.39
CDC39P25655 ILM1YJR118C 612 nt0.1□□□□□ -2.39
CDC39P25655 SDS22YKL193C 1017 nt0.1□□□□□ -2.39
CDC39P25655 INP2YMR163C 2118 nt0.09□□□□□ -2.39
CDC39P25655 MRPS8YMR158W 468 nt0.09□□□□□ -2.4
CDC39P25655 RPB10YOR210W 213 nt0.09□□□□□ -2.4
CDC39P25655 YBR076C-AYBR076C-A 267 nt0.09□□□□□ -2.4
CDC39P25655 snR51snR51 107 nt0.09□□□□□ -2.4
CDC39P25655 YCR100CYCR100C 951 nt0.08□□□□□ -2.4
CDC39P25655 YIR018C-AYIR018C-A 138 nt0.08□□□□□ -2.4
CDC39P25655 MPC1YGL080W 393 nt0.08□□□□□ -2.4
CDC39P25655 EMC4YGL231C 573 nt0.08□□□□□ -2.4
CDC39P25655 YIL066W-AYIL066W-A 444 nt0.08□□□□□ -2.4
Retrieved 100 of 7,029 protein–RNA pairs in 69.4 ms