Protein–RNA interactions for Protein: P22138

RPA135, DNA-directed RNA polymerase I subunit RPA135, yeastyeast

Known RBP Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPA135P22138 snR74snR74 88 nt2.22□□□□□ -2.05
RPA135P22138 YNL114CYNL114C 372 nt2.22□□□□□ -2.05
RPA135P22138 YOR376WYOR376W 369 nt2.22□□□□□ -2.05
RPA135P22138 SPT21YMR179W 2277 nt2.22□□□□□ -2.05
RPA135P22138 SNF5YBR289W 2718 nt2.22□□□□□ -2.05
RPA135P22138 HSH155YMR288W 2916 nt2.21□□□□□ -2.05
RPA135P22138 SDH6YDR379C-A 240 nt2.21□□□□□ -2.06
RPA135P22138 YHR032W-AYHR032W-A 180 nt2.21□□□□□ -2.06
RPA135P22138 YPR092WYPR092W 306 nt2.21□□□□□ -2.06
RPA135P22138 MUK1YPL070W 1839 nt2.21□□□□□ -2.06
RPA135P22138 YOL098CYOL098C 3114 nt2.21□□□□□ -2.06
RPA135P22138 NIP100YPL174C 2607 nt2.21□□□□□ -2.06
RPA135P22138 YLR035C-AYLR035C-A 3468 nt2.2□□□□□ -2.06
RPA135P22138 PAU3YCR104W 375 nt2.2□□□□□ -2.06
RPA135P22138 YBR182C-AYBR182C-A 195 nt2.2□□□□□ -2.06
RPA135P22138 snR46snR46 197 nt2.2□□□□□ -2.06
RPA135P22138 SLM1YIL105C 2061 nt2.2□□□□□ -2.06
RPA135P22138 TFC8YPL007C 1767 nt2.19□□□□□ -2.06
RPA135P22138 YHR071C-AYHR071C-A 321 nt2.19□□□□□ -2.06
RPA135P22138 tW(CCA)G1tW(CCA)G1 72 nt2.19□□□□□ -2.06
RPA135P22138 tW(CCA)G2tW(CCA)G2 72 nt2.19□□□□□ -2.06
RPA135P22138 tW(CCA)JtW(CCA)J 72 nt2.19□□□□□ -2.06
RPA135P22138 tW(CCA)KtW(CCA)K 72 nt2.19□□□□□ -2.06
RPA135P22138 tW(CCA)MtW(CCA)M 72 nt2.19□□□□□ -2.06
RPA135P22138 tW(CCA)PtW(CCA)P 72 nt2.19□□□□□ -2.06
RPA135P22138 YIL156W-BYIL156W-B 222 nt2.19□□□□□ -2.06
RPA135P22138 YIR030W-AYIR030W-A 384 nt2.19□□□□□ -2.06
RPA135P22138 snR43snR43 209 nt2.19□□□□□ -2.06
RPA135P22138 DNF1YER166W 4716 nt2.18□□□□□ -2.06
RPA135P22138 NOP14YDL148C 2433 nt2.18□□□□□ -2.06
RPA135P22138 YHR073W-AYHR073W-A 177 nt2.18□□□□□ -2.06
RPA135P22138 SGF11YPL047W 300 nt2.18□□□□□ -2.06
RPA135P22138 SEC5YDR166C 2916 nt2.18□□□□□ -2.06
RPA135P22138 LHS1YKL073W 2646 nt2.17□□□□□ -2.06
RPA135P22138 YDL118WYDL118W 381 nt2.17□□□□□ -2.06
RPA135P22138 YGL217CYGL217C 342 nt2.17□□□□□ -2.06
RPA135P22138 YBL083CYBL083C 426 nt2.17□□□□□ -2.06
RPA135P22138 CSF1YLR087C 8877 nt2.16□□□□□ -2.06
RPA135P22138 SGS1YMR190C 4344 nt2.16□□□□□ -2.06
RPA135P22138 SPC98YNL126W 2541 nt2.16□□□□□ -2.06
RPA135P22138 RFX1YLR176C 2436 nt2.16□□□□□ -2.06
RPA135P22138 IRA2YOL081W 9240 nt2.16□□□□□ -2.06
RPA135P22138 snR72snR72 98 nt2.16□□□□□ -2.06
RPA135P22138 RPL42BYHR141C 321 nt2.16□□□□□ -2.06
RPA135P22138 RPL42AYNL162W 321 nt2.16□□□□□ -2.06
RPA135P22138 YOR394C-AYOR394C-A 168 nt2.16□□□□□ -2.06
RPA135P22138 SPO75YLL005C 2607 nt2.16□□□□□ -2.06
RPA135P22138 MYO4YAL029C 4416 nt2.16□□□□□ -2.06
RPA135P22138 MSB1YOR188W 3414 nt2.15□□□□□ -2.06
RPA135P22138 YJR039WYJR039W 3366 nt2.15□□□□□ -2.07
RPA135P22138 PDR11YIL013C 4236 nt2.15□□□□□ -2.07
RPA135P22138 NEO1YIL048W 3456 nt2.14□□□□□ -2.07
RPA135P22138 IRE1YHR079C 3348 nt2.14□□□□□ -2.07
RPA135P22138 CTR9YOL145C 3234 nt2.13□□□□□ -2.07
RPA135P22138 LYS14YDR034C 2373 nt2.13□□□□□ -2.07
RPA135P22138 VMR1YHL035C 4779 nt2.13□□□□□ -2.07
RPA135P22138 PKH3YDR466W 2697 nt2.13□□□□□ -2.07
RPA135P22138 YCR043CYCR043C 384 nt2.13□□□□□ -2.07
RPA135P22138 YBR131C-AYBR131C-A 90 nt2.13□□□□□ -2.07
RPA135P22138 SWI6YLR182W 2412 nt2.13□□□□□ -2.07
RPA135P22138 PAU18YLL064C 363 nt2.12□□□□□ -2.07
RPA135P22138 PAU6YNR076W 363 nt2.12□□□□□ -2.07
RPA135P22138 SCD5YOR329C 2619 nt2.11□□□□□ -2.07
RPA135P22138 RPS27BYHR021C 249 nt2.11□□□□□ -2.07
RPA135P22138 RPB10YOR210W 213 nt2.11□□□□□ -2.07
RPA135P22138 SEC16YPL085W 6588 nt2.11□□□□□ -2.07
RPA135P22138 YGR164WYGR164W 336 nt2.1□□□□□ -2.07
RPA135P22138 CLU1YMR012W 3834 nt2.1□□□□□ -2.07
RPA135P22138 YMR247W-AYMR247W-A 144 nt2.1□□□□□ -2.07
RPA135P22138 SWI5YDR146C 2130 nt2.09□□□□□ -2.07
RPA135P22138 UBP2YOR124C 3819 nt2.08□□□□□ -2.08
RPA135P22138 PDR3YBL005W 2931 nt2.08□□□□□ -2.08
RPA135P22138 SLY1YDR189W 2001 nt2.08□□□□□ -2.08
RPA135P22138 LRE1YCL051W 1752 nt2.08□□□□□ -2.08
RPA135P22138 snR70snR70 164 nt2.07□□□□□ -2.08
RPA135P22138 ECM12YHR021W-A 456 nt2.07□□□□□ -2.08
RPA135P22138 YJL120WYJL120W 324 nt2.07□□□□□ -2.08
RPA135P22138 YNL205CYNL205C 423 nt2.07□□□□□ -2.08
RPA135P22138 YOR218CYOR218C 420 nt2.07□□□□□ -2.08
RPA135P22138 YBR174CYBR174C 315 nt2.07□□□□□ -2.08
RPA135P22138 AGC1YPR021C 2709 nt2.07□□□□□ -2.08
RPA135P22138 SPO21YOL091W 1830 nt2.07□□□□□ -2.08
RPA135P22138 YOR381W-AYOR381W-A 168 nt2.06□□□□□ -2.08
RPA135P22138 YCL046WYCL046W 324 nt2.06□□□□□ -2.08
RPA135P22138 TFC3YAL001C 3483 nt2.05□□□□□ -2.08
RPA135P22138 YNL144CYNL144C 2223 nt2.05□□□□□ -2.08
RPA135P22138 VTC1YER072W 390 nt2.05□□□□□ -2.08
RPA135P22138 EMP24YGL200C 612 nt2.05□□□□□ -2.08
RPA135P22138 YBL012CYBL012C 402 nt2.05□□□□□ -2.08
RPA135P22138 ENV11YGR071C 2583 nt2.04□□□□□ -2.08
RPA135P22138 SRP14YDL092W 441 nt2.04□□□□□ -2.08
RPA135P22138 YDR182W-AYDR182W-A 204 nt2.04□□□□□ -2.08
RPA135P22138 CUL3YGR003W 2235 nt2.04□□□□□ -2.08
RPA135P22138 COF1YLL050C 432 nt2.04□□□□□ -2.08
RPA135P22138 TBS1YBR150C 3285 nt2.04□□□□□ -2.08
RPA135P22138 snR52snR52 92 nt2.04□□□□□ -2.08
RPA135P22138 FRK1YPL141C 2598 nt2.04□□□□□ -2.08
RPA135P22138 ZRG17YNR039C 1818 nt2.03□□□□□ -2.08
RPA135P22138 snR85snR85 171 nt2.03□□□□□ -2.08
RPA135P22138 YDR003W-AYDR003W-A 123 nt2.03□□□□□ -2.08
Retrieved 100 of 7,029 protein–RNA pairs in 60.3 ms