Protein–RNA interactions for Protein: P20448

HCA4, ATP-dependent RNA helicase HCA4, yeastyeast

Known RBP Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HCA4P20448 MNL2YLR057W 2550 nt2.4□□□□□ -2.03
HCA4P20448 IRC8YJL051W 2469 nt2.4□□□□□ -2.03
HCA4P20448 UBP1YDL122W 2430 nt2.39□□□□□ -2.03
HCA4P20448 NOP14YDL148C 2433 nt2.39□□□□□ -2.03
HCA4P20448 STH1YIL126W 4080 nt2.39□□□□□ -2.03
HCA4P20448 EDS1YBR033W 2760 nt2.38□□□□□ -2.03
HCA4P20448 UBR1YGR184C 5853 nt2.38□□□□□ -2.03
HCA4P20448 SPT21YMR179W 2277 nt2.38□□□□□ -2.03
HCA4P20448 RPS27BYHR021C 249 nt2.38□□□□□ -2.03
HCA4P20448 SGF11YPL047W 300 nt2.38□□□□□ -2.03
HCA4P20448 snR52snR52 92 nt2.38□□□□□ -2.03
HCA4P20448 CFT2YLR115W 2580 nt2.37□□□□□ -2.03
HCA4P20448 YCR043CYCR043C 384 nt2.37□□□□□ -2.03
HCA4P20448 TIM9YEL020W-A 264 nt2.37□□□□□ -2.03
HCA4P20448 YKL165C-AYKL165C-A 234 nt2.37□□□□□ -2.03
HCA4P20448 YOR381W-AYOR381W-A 168 nt2.37□□□□□ -2.03
HCA4P20448 TDA9YML081W 3756 nt2.37□□□□□ -2.03
HCA4P20448 BNI1YNL271C 5862 nt2.37□□□□□ -2.03
HCA4P20448 PXA2YKL188C 2562 nt2.36□□□□□ -2.03
HCA4P20448 YFR016CYFR016C 3702 nt2.36□□□□□ -2.03
HCA4P20448 DGR1YNL130C-A 147 nt2.36□□□□□ -2.03
HCA4P20448 SLM1YIL105C 2061 nt2.36□□□□□ -2.03
HCA4P20448 UFD4YKL010C 4452 nt2.36□□□□□ -2.03
HCA4P20448 BRE1YDL074C 2103 nt2.35□□□□□ -2.03
HCA4P20448 KOG1YHR186C 4674 nt2.35□□□□□ -2.03
HCA4P20448 VPS34YLR240W 2628 nt2.35□□□□□ -2.03
HCA4P20448 EMP24YGL200C 612 nt2.35□□□□□ -2.03
HCA4P20448 YNL114CYNL114C 372 nt2.35□□□□□ -2.03
HCA4P20448 SNF5YBR289W 2718 nt2.35□□□□□ -2.03
HCA4P20448 YHR180W-AYHR180W-A 183 nt2.34□□□□□ -2.03
HCA4P20448 YOR394C-AYOR394C-A 168 nt2.34□□□□□ -2.03
HCA4P20448 VPH1YOR270C 2523 nt2.33□□□□□ -2.04
HCA4P20448 VMR1YHL035C 4779 nt2.32□□□□□ -2.04
HCA4P20448 SPP41YDR464W 4308 nt2.32□□□□□ -2.04
HCA4P20448 YDR524C-AYDR524C-A 120 nt2.32□□□□□ -2.04
HCA4P20448 YLR146W-AYLR146W-A 189 nt2.32□□□□□ -2.04
HCA4P20448 EFR3YMR212C 2349 nt2.32□□□□□ -2.04
HCA4P20448 INP2YMR163C 2118 nt2.32□□□□□ -2.04
HCA4P20448 RPL34BYIL052C 366 nt2.31□□□□□ -2.04
HCA4P20448 PMP1YCR024C-A 123 nt2.3□□□□□ -2.04
HCA4P20448 ELG1YOR144C 2376 nt2.3□□□□□ -2.04
HCA4P20448 IST2YBR086C 2841 nt2.29□□□□□ -2.04
HCA4P20448 SPO75YLL005C 2607 nt2.29□□□□□ -2.04
HCA4P20448 TRL1YJL087C 2484 nt2.29□□□□□ -2.04
HCA4P20448 RPH1YER169W 2391 nt2.29□□□□□ -2.04
HCA4P20448 snR72snR72 98 nt2.29□□□□□ -2.04
HCA4P20448 YBL109WYBL109W 336 nt2.29□□□□□ -2.04
HCA4P20448 YOR161W-BYOR161W-B 261 nt2.29□□□□□ -2.04
HCA4P20448 TOR2YKL203C 7425 nt2.29□□□□□ -2.04
HCA4P20448 PRP42YDR235W 1635 nt2.28□□□□□ -2.04
HCA4P20448 NIP100YPL174C 2607 nt2.28□□□□□ -2.04
HCA4P20448 RPL42BYHR141C 321 nt2.28□□□□□ -2.04
HCA4P20448 RPL42AYNL162W 321 nt2.28□□□□□ -2.04
HCA4P20448 USO1YDL058W 5373 nt2.28□□□□□ -2.04
HCA4P20448 RTT101YJL047C 2529 nt2.27□□□□□ -2.05
HCA4P20448 RAV1YJR033C 4074 nt2.27□□□□□ -2.05
HCA4P20448 HSL1YKL101W 4557 nt2.27□□□□□ -2.05
HCA4P20448 SAC3YDR159W 3906 nt2.27□□□□□ -2.05
HCA4P20448 SPC98YNL126W 2541 nt2.26□□□□□ -2.05
HCA4P20448 YCR102W-AYCR102W-A 198 nt2.26□□□□□ -2.05
HCA4P20448 ECM12YHR021W-A 456 nt2.26□□□□□ -2.05
HCA4P20448 YOR345CYOR345C 351 nt2.26□□□□□ -2.05
HCA4P20448 YDR341CYDR341C 1824 nt2.26□□□□□ -2.05
HCA4P20448 RGA1YOR127W 3024 nt2.25□□□□□ -2.05
HCA4P20448 ULI1YFR026C 510 nt2.25□□□□□ -2.05
HCA4P20448 YHR210CYHR210C 1026 nt2.25□□□□□ -2.05
HCA4P20448 YKR075W-AYKR075W-A 270 nt2.25□□□□□ -2.05
HCA4P20448 RPL33BYOR234C 324 nt2.25□□□□□ -2.05
HCA4P20448 YOR329W-AYOR329W-A 210 nt2.25□□□□□ -2.05
HCA4P20448 GYP5YPL249C 2685 nt2.24□□□□□ -2.05
HCA4P20448 UBP2YOR124C 3819 nt2.24□□□□□ -2.05
HCA4P20448 BUD2YKL092C 3315 nt2.24□□□□□ -2.05
HCA4P20448 SYH1YPL105C 2550 nt2.24□□□□□ -2.05
HCA4P20448 CDC60YPL160W 3273 nt2.24□□□□□ -2.05
HCA4P20448 GIP3YPL137C 3831 nt2.23□□□□□ -2.05
HCA4P20448 SWI6YLR182W 2412 nt2.22□□□□□ -2.05
HCA4P20448 SPO21YOL091W 1830 nt2.22□□□□□ -2.05
HCA4P20448 YLL007CYLL007C 1998 nt2.22□□□□□ -2.05
HCA4P20448 RPL37BYDR500C 267 nt2.22□□□□□ -2.05
HCA4P20448 PAU18YLL064C 363 nt2.22□□□□□ -2.05
HCA4P20448 YBL012CYBL012C 402 nt2.22□□□□□ -2.05
HCA4P20448 PAU6YNR076W 363 nt2.22□□□□□ -2.05
HCA4P20448 FKS1YLR342W 5631 nt2.21□□□□□ -2.05
HCA4P20448 TFC8YPL007C 1767 nt2.21□□□□□ -2.06
HCA4P20448 RPB10YOR210W 213 nt2.21□□□□□ -2.06
HCA4P20448 RFX1YLR176C 2436 nt2.21□□□□□ -2.06
HCA4P20448 SWI5YDR146C 2130 nt2.21□□□□□ -2.06
HCA4P20448 COS111YBR203W 2775 nt2.2□□□□□ -2.06
HCA4P20448 YCR087C-AYCR087C-A 462 nt2.2□□□□□ -2.06
HCA4P20448 YDR182W-AYDR182W-A 204 nt2.2□□□□□ -2.06
HCA4P20448 YOR218CYOR218C 420 nt2.2□□□□□ -2.06
HCA4P20448 COY1YKL179C 2040 nt2.2□□□□□ -2.06
HCA4P20448 YER172C-AYER172C-A 381 nt2.19□□□□□ -2.06
HCA4P20448 YJL120WYJL120W 324 nt2.19□□□□□ -2.06
HCA4P20448 YBR174CYBR174C 315 nt2.19□□□□□ -2.06
HCA4P20448 NAM7YMR080C 2916 nt2.18□□□□□ -2.06
HCA4P20448 SEC31YDL195W 3822 nt2.18□□□□□ -2.06
HCA4P20448 MGA2YIR033W 3342 nt2.18□□□□□ -2.06
HCA4P20448 YEL073CYEL073C 324 nt2.18□□□□□ -2.06
HCA4P20448 YHR073W-AYHR073W-A 177 nt2.18□□□□□ -2.06
Retrieved 100 of 7,029 protein–RNA pairs in 48.4 ms